RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 B2RBV5 119 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 TSPAN1O60635 241 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 FTH1P02794 183 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 PCNAP12004 261 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 NCF1P14598 390 aaPredicted RBP11.22□□□□□ -0.61
SCN1B-208ENST00000640135 GCKP35557 465 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 SKIV2L2P42285 1042 aaKnown RBP11.22□□□□□ -0.61
SCN1B-208ENST00000640135 APLP1P51693 650 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 GYS2P54840 703 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 TBX2Q13207 712 aaPredicted RBP11.22□□□□□ -0.61
SCN1B-208ENST00000640135 DPYSL3Q14195 570 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 GPR158Q5T848 1215 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 HLA-DQA1Q5Y7H0 255 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 RFX8Q6ZV50 586 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 BEND7Q8N7W2 519 aaPredicted RBP11.22□□□□□ -0.61
SCN1B-208ENST00000640135 LEMD2Q8NC56 503 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 ZNF473Q8WTR7 871 aaKnown RBP11.22□□□□□ -0.61
SCN1B-208ENST00000640135 SIKE1Q9BRV8 207 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 SNRNP25Q9BV90 132 aaKnown RBP11.22□□□□□ -0.61
SCN1B-208ENST00000640135 CCDC134Q9H6E4 229 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 ARVCFO00192 962 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 TGFB1I1O43294 461 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 PPP1R11O60927 126 aaPredicted RBP11.22□□□□□ -0.61
SCN1B-208ENST00000640135 PFKMP08237 780 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 SLURP2P0DP57 97 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 CCNB1P14635 433 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 MGAT1P26572 445 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 RFC2P35250 354 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 DUSP4Q13115 394 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 DMC1Q14565 340 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 TARBP2Q15633 366 aaKnown RBP11.22□□□□□ -0.61
SCN1B-208ENST00000640135 SLC25A52Q3SY17 297 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 INTS6LQ5JSJ4 861 aaKnown RBP11.22□□□□□ -0.61
SCN1B-208ENST00000640135 AFTPHQ6ULP2 937 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 NRDE2Q9H7Z3 1164 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 VPS45Q9NRW7 570 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 SUFUQ9UMX1 484 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 ANKRD26Q9UPS8 1709 aa11.22□□□□□ -0.61
SCN1B-208ENST00000640135 ABHD14A-ACY1A0A1B0GW23 586 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 RBL1P28749 1068 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 LSP1P33241 339 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 GPR1P46091 355 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 YBEYP58557 167 aaPredicted RBP11.21□□□□□ -0.61
SCN1B-208ENST00000640135 FPGSQ05932 587 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 ZCCHC8Q6NZY4 707 aaKnown RBP11.21□□□□□ -0.61
SCN1B-208ENST00000640135 OTOP2Q7RTS6 562 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 TRPM8Q7Z2W7 1104 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 OTULINQ96BN8 352 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 ZDHHC4Q9NPG8 344 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 KCTD5Q9NXV2 234 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 MPP6Q9NZW5 540 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 PSME2Q9UL46 239 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 BAZ2BQ9UIF8 2168 aaKnown RBP11.21□□□□□ -0.61
SCN1B-208ENST00000640135 TRIM13O60858 407 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 STAU1O95793 577 aaKnown RBP11.21□□□□□ -0.61
SCN1B-208ENST00000640135 RPSAP08865 295 aaKnown RBP11.21□□□□□ -0.61
SCN1B-208ENST00000640135 PTPN2P17706 415 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 TNNI3P19429 210 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 HLA-DPA1P20036 260 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 RAB30Q15771 203 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 DDR2Q16832 855 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 GRAMD4Q6IC98 578 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 KLHL35Q6PF15 583 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 BBS12Q6ZW61 710 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 PRPF39Q86UA1 669 aaKnown RBP11.21□□□□□ -0.61
SCN1B-208ENST00000640135 PRRG3Q9BZD7 231 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 PDZD7Q9H5P4 517 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.21□□□□□ -0.61
SCN1B-208ENST00000640135 AP3M1Q9Y2T2 418 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 MYO1GB0I1T2 1018 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 FAM163BP0C2L3 166 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 MAPK9P45984 424 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 NR6A1Q15406 480 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 ATAD3BQ5T9A4 648 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 ZSWIM2Q8NEG5 633 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 CAVIN3Q969G5 261 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 PHF21AQ96BD5 680 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 RAD21L1Q9H4I0 556 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 RPS6KB2Q9UBS0 482 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 TMCC3Q9ULS5 477 aa11.21□□□□□ -0.61
SCN1B-208ENST00000640135 CASZ1Q86V15 1759 aa11.21□□□□□ -0.62
SCN1B-208ENST00000640135 CCNT2O60583 730 aaKnown RBP11.21□□□□□ -0.62
SCN1B-208ENST00000640135 MAGEC1O60732 1142 aa11.21□□□□□ -0.62
SCN1B-208ENST00000640135 SKAP2O75563 359 aaPredicted RBP11.21□□□□□ -0.62
SCN1B-208ENST00000640135 IL1BP01584 269 aa11.21□□□□□ -0.62
SCN1B-208ENST00000640135 FGF1P05230 155 aa11.21□□□□□ -0.62
SCN1B-208ENST00000640135 TPH1P17752 444 aa11.21□□□□□ -0.62
SCN1B-208ENST00000640135 GLRBP48167 497 aa11.21□□□□□ -0.62
SCN1B-208ENST00000640135 FLOT2Q14254 428 aa11.21□□□□□ -0.62
SCN1B-208ENST00000640135 C4orf32Q8N8J7 132 aa11.21□□□□□ -0.62
SCN1B-208ENST00000640135 FUBP3Q96I24 572 aaKnown RBP eCLIP11.21□□□□□ -0.62
SCN1B-208ENST00000640135 PPP1R10Q96QC0 940 aaKnown RBP11.21□□□□□ -0.62
SCN1B-208ENST00000640135 CACNA2D2Q9NY47 1150 aa11.21□□□□□ -0.62
SCN1B-208ENST00000640135 PCDHA11Q9Y5I1 949 aa11.21□□□□□ -0.62
SCN1B-208ENST00000640135 NT5C1B-RDH14C9J2C7 533 aa11.2□□□□□ -0.62
SCN1B-208ENST00000640135 CACNB4O00305 520 aaPredicted RBP11.2□□□□□ -0.62
SCN1B-208ENST00000640135 ANXA5P08758 320 aa11.2□□□□□ -0.62
SCN1B-208ENST00000640135 AMD1P17707 334 aa11.2□□□□□ -0.62
SCN1B-208ENST00000640135 PEX5P50542 639 aa11.2□□□□□ -0.62
SCN1B-208ENST00000640135 TAF10Q12962 218 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms