RNA–Protein interactions for RNA: ENST00000638605.1

ALK-206, Transcript of ALK receptor tyrosine kinase, humanhuman

TSL 1 (best)

Gene ALK, Length 1,757 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-206ENST00000638605 AFMIDQ63HM1 303 aa12.79□□□□□ -0.36
ALK-206ENST00000638605 Q6ZNB5 142 aa12.79□□□□□ -0.36
ALK-206ENST00000638605 BBS7Q8IWZ6 715 aa12.79□□□□□ -0.36
ALK-206ENST00000638605 ZCCHC9Q8N567 271 aaKnown RBP12.79□□□□□ -0.36
ALK-206ENST00000638605 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.79□□□□□ -0.36
ALK-206ENST00000638605 SFXN1Q9H9B4 322 aa12.79□□□□□ -0.36
ALK-206ENST00000638605 ETNK1Q9HBU6 452 aa12.79□□□□□ -0.36
ALK-206ENST00000638605 IPO11Q9UI26 975 aaKnown RBP12.79□□□□□ -0.36
ALK-206ENST00000638605 HPCAL4Q9UM19 191 aa12.79□□□□□ -0.36
ALK-206ENST00000638605 ARHGAP26Q9UNA1 814 aa12.79□□□□□ -0.36
ALK-206ENST00000638605 XIRP2A4UGR9 3374 aa12.78□□□□□ -0.36
ALK-206ENST00000638605 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.78□□□□□ -0.36
ALK-206ENST00000638605 ZNF197O14709 1029 aa12.78□□□□□ -0.36
ALK-206ENST00000638605 MAFKO60675 156 aa12.78□□□□□ -0.36
ALK-206ENST00000638605 TBL1XO60907 577 aa12.78□□□□□ -0.36
ALK-206ENST00000638605 NEBLO76041 1014 aa12.78□□□□□ -0.36
ALK-206ENST00000638605 TMEM63AO94886 807 aa12.78□□□□□ -0.36
ALK-206ENST00000638605 LATS1O95835 1130 aa12.78□□□□□ -0.36
ALK-206ENST00000638605 JCHAINP01591 159 aa12.78□□□□□ -0.36
ALK-206ENST00000638605 PFKLP17858 780 aa12.78□□□□□ -0.36
ALK-206ENST00000638605 CCNCP24863 283 aa12.78□□□□□ -0.36
ALK-206ENST00000638605 PSMB4P28070 264 aa12.78□□□□□ -0.36
ALK-206ENST00000638605 HSD17B3P37058 310 aa12.78□□□□□ -0.36
ALK-206ENST00000638605 LMAN1P49257 510 aa12.78□□□□□ -0.36
ALK-206ENST00000638605 PMS2P54278 862 aa12.78□□□□□ -0.36
ALK-206ENST00000638605 CDH4P55283 916 aa12.78□□□□□ -0.36
ALK-206ENST00000638605 C4orf22Q6V702 233 aa12.78□□□□□ -0.36
ALK-206ENST00000638605 MREGQ8N565 214 aa12.78□□□□□ -0.36
ALK-206ENST00000638605 NAT8LQ8N9F0 302 aa12.78□□□□□ -0.36
ALK-206ENST00000638605 ITFG1Q8TB96 612 aa12.78□□□□□ -0.36
ALK-206ENST00000638605 ZSWIM3Q96MP5 696 aa12.78□□□□□ -0.36
ALK-206ENST00000638605 CDCA3Q99618 268 aaPredicted RBP12.78□□□□□ -0.36
ALK-206ENST00000638605 SP110Q9HB58 689 aa12.78□□□□□ -0.36
ALK-206ENST00000638605 ZNF212Q9UDV6 495 aa12.78□□□□□ -0.36
ALK-206ENST00000638605 STOML2Q9UJZ1 356 aa12.78□□□□□ -0.36
ALK-206ENST00000638605 HELZP42694 1942 aaKnown RBP12.77□□□□□ -0.36
ALK-206ENST00000638605 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.77□□□□□ -0.36
ALK-206ENST00000638605 A0A1B0GVM2 712 aa12.77□□□□□ -0.36
ALK-206ENST00000638605 TYW5A2RUC4 315 aaKnown RBP12.77□□□□□ -0.36
ALK-206ENST00000638605 TCAF2A6NFQ2 919 aa12.77□□□□□ -0.36
ALK-206ENST00000638605 MAP2K7O14733 419 aa12.77□□□□□ -0.36
ALK-206ENST00000638605 LINC01565O15544 149 aa12.77□□□□□ -0.36
ALK-206ENST00000638605 PPFIA2O75334 1257 aa12.77□□□□□ -0.36
ALK-206ENST00000638605 CLDN11O75508 207 aa12.77□□□□□ -0.36
ALK-206ENST00000638605 ZNF189O75820 626 aaPredicted RBP12.77□□□□□ -0.36
ALK-206ENST00000638605 PRAMEF12O95522 483 aa12.77□□□□□ -0.36
ALK-206ENST00000638605 CCNB1P14635 433 aa12.77□□□□□ -0.36
ALK-206ENST00000638605 ACVRL1P37023 503 aa12.77□□□□□ -0.36
ALK-206ENST00000638605 ZNF177Q13360 481 aaPredicted RBP12.77□□□□□ -0.36
ALK-206ENST00000638605 KCNJ11Q14654 390 aa12.77□□□□□ -0.36
ALK-206ENST00000638605 SLMAPQ14BN4 828 aa12.77□□□□□ -0.36
ALK-206ENST00000638605 HIF1AQ16665 826 aa12.77□□□□□ -0.36
ALK-206ENST00000638605 PARP15Q460N3 678 aa12.77□□□□□ -0.36
ALK-206ENST00000638605 C5orf22Q49AR2 442 aa12.77□□□□□ -0.36
ALK-206ENST00000638605 TCEAL5Q5H9L2 206 aa12.77□□□□□ -0.36
ALK-206ENST00000638605 HP1BP3Q5SSJ5 553 aaPredicted RBP12.77□□□□□ -0.36
ALK-206ENST00000638605 TIGD7Q6NT04 549 aaPredicted RBP12.77□□□□□ -0.36
ALK-206ENST00000638605 LEKR1Q6ZMV7 388 aa12.77□□□□□ -0.36
ALK-206ENST00000638605 HTR3DQ70Z44 454 aa12.77□□□□□ -0.36
ALK-206ENST00000638605 HOOK3Q86VS8 718 aa12.77□□□□□ -0.36
ALK-206ENST00000638605 CARNMT1Q8N4J0 409 aa12.77□□□□□ -0.36
ALK-206ENST00000638605 HJURPQ8NCD3 748 aaPredicted RBP12.77□□□□□ -0.36
ALK-206ENST00000638605 USP13Q92995 863 aaPredicted RBP12.77□□□□□ -0.36
ALK-206ENST00000638605 PABPC5Q96DU9 382 aaKnown RBP12.77□□□□□ -0.36
ALK-206ENST00000638605 TSGA13Q96PP4 275 aa12.77□□□□□ -0.36
ALK-206ENST00000638605 RBM15Q96T37 977 aaKnown RBP eCLIP12.77□□□□□ -0.36
ALK-206ENST00000638605 NSUN3Q9H649 340 aaKnown RBP12.77□□□□□ -0.36
ALK-206ENST00000638605 TDP1Q9NUW8 608 aa12.77□□□□□ -0.36
ALK-206ENST00000638605 DZANK1Q9NVP4 752 aa12.77□□□□□ -0.36
ALK-206ENST00000638605 RSPH14Q9UHP6 348 aa12.77□□□□□ -0.36
ALK-206ENST00000638605 CDH22Q9UJ99 828 aa12.77□□□□□ -0.36
ALK-206ENST00000638605 A0A0D9SEW6 157 aa12.76□□□□□ -0.37
ALK-206ENST00000638605 H0Y626 953 aa12.76□□□□□ -0.37
ALK-206ENST00000638605 J3KR12 359 aa12.76□□□□□ -0.37
ALK-206ENST00000638605 MATN3O15232 486 aa12.76□□□□□ -0.37
ALK-206ENST00000638605 CHADO15335 359 aa12.76□□□□□ -0.37
ALK-206ENST00000638605 ZBTB24O43167 697 aaPredicted RBP12.76□□□□□ -0.37
ALK-206ENST00000638605 RHOCP08134 193 aa12.76□□□□□ -0.37
ALK-206ENST00000638605 POU2F2P09086 479 aa12.76□□□□□ -0.37
ALK-206ENST00000638605 ZNF33AQ06730 810 aa12.76□□□□□ -0.37
ALK-206ENST00000638605 HYAL1Q12794 435 aa12.76□□□□□ -0.37
ALK-206ENST00000638605 KCNC3Q14003 757 aa12.76□□□□□ -0.37
ALK-206ENST00000638605 UAP1Q16222 522 aaPredicted RBP12.76□□□□□ -0.37
ALK-206ENST00000638605 TEX44Q53QW1 395 aa12.76□□□□□ -0.37
ALK-206ENST00000638605 C6orf118Q5T5N4 469 aa12.76□□□□□ -0.37
ALK-206ENST00000638605 CFAP58Q5T655 872 aa12.76□□□□□ -0.37
ALK-206ENST00000638605 TTC39BQ5VTQ0 682 aaPredicted RBP12.76□□□□□ -0.37
ALK-206ENST00000638605 IL31Q6EBC2 164 aa12.76□□□□□ -0.37
ALK-206ENST00000638605 TPGS1Q6ZTW0 290 aa12.76□□□□□ -0.37
ALK-206ENST00000638605 TDRD5Q8NAT2 981 aaKnown RBP12.76□□□□□ -0.37
ALK-206ENST00000638605 OR52K2Q8NGK3 314 aa12.76□□□□□ -0.37
ALK-206ENST00000638605 DDI1Q8WTU0 396 aa12.76□□□□□ -0.37
ALK-206ENST00000638605 TMA16Q96EY4 203 aaKnown RBP12.76□□□□□ -0.37
ALK-206ENST00000638605 SPON2Q9BUD6 331 aa12.76□□□□□ -0.37
ALK-206ENST00000638605 TXLNGYQ9BZA5 131 aa12.76□□□□□ -0.37
ALK-206ENST00000638605 TSPYL1Q9H0U9 437 aa12.76□□□□□ -0.37
ALK-206ENST00000638605 SEMA4AQ9H3S1 761 aa12.76□□□□□ -0.37
ALK-206ENST00000638605 ZNF576Q9H609 170 aa12.76□□□□□ -0.37
ALK-206ENST00000638605 SAYSD1Q9NPB0 183 aa12.76□□□□□ -0.37
ALK-206ENST00000638605 ZNF510Q9Y2H8 683 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms