RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 C9orf64Q5T6V5 341 aa16.91■□□□□ 0.3
COLCA2-206ENST00000638573 SND1Q7KZF4 910 aaKnown RBP eCLIP16.91■□□□□ 0.3
COLCA2-206ENST00000638573 ARCQ7LC44 396 aa16.91■□□□□ 0.3
COLCA2-206ENST00000638573 PIP4P1Q86T03 277 aa16.91■□□□□ 0.3
COLCA2-206ENST00000638573 MCOLN2Q8IZK6 566 aa16.91■□□□□ 0.3
COLCA2-206ENST00000638573 ATP6V0D2Q8N8Y2 350 aa16.91■□□□□ 0.3
COLCA2-206ENST00000638573 C3orf20Q8ND61 904 aa16.91■□□□□ 0.3
COLCA2-206ENST00000638573 C1orf216Q8TAB5 229 aa16.91■□□□□ 0.3
COLCA2-206ENST00000638573 DNASE2BQ8WZ79 361 aa16.91■□□□□ 0.3
COLCA2-206ENST00000638573 TBCBQ99426 244 aa16.91■□□□□ 0.3
COLCA2-206ENST00000638573 DDX50Q9BQ39 737 aaKnown RBP16.91■□□□□ 0.3
COLCA2-206ENST00000638573 SIK2Q9H0K1 926 aa16.91■□□□□ 0.3
COLCA2-206ENST00000638573 TAS2R14Q9NYV8 317 aa16.91■□□□□ 0.3
COLCA2-206ENST00000638573 ADAMTS1Q9UHI8 967 aa16.91■□□□□ 0.3
COLCA2-206ENST00000638573 SLC12A6Q9UHW9 1150 aa16.91■□□□□ 0.3
COLCA2-206ENST00000638573 PAXBP1Q9Y5B6 917 aa16.91■□□□□ 0.3
COLCA2-206ENST00000638573 A0A1B0GVT2 93 aa16.9■□□□□ 0.3
COLCA2-206ENST00000638573 MID1O15344 667 aa16.9■□□□□ 0.3
COLCA2-206ENST00000638573 PAGE1O75459 146 aa16.9■□□□□ 0.3
COLCA2-206ENST00000638573 GJB3O75712 270 aa16.9■□□□□ 0.3
COLCA2-206ENST00000638573 CNTN5O94779 1100 aa16.9■□□□□ 0.3
COLCA2-206ENST00000638573 PLEKP08567 350 aaPredicted RBP16.9■□□□□ 0.3
COLCA2-206ENST00000638573 KRT3P12035 628 aa16.9■□□□□ 0.3
COLCA2-206ENST00000638573 SDC4P31431 198 aa16.9■□□□□ 0.3
COLCA2-206ENST00000638573 HOXD12P35452 270 aa16.9■□□□□ 0.3
COLCA2-206ENST00000638573 FLT3P36888 993 aa16.9■□□□□ 0.3
COLCA2-206ENST00000638573 ATXN3P54252 364 aaPredicted RBP16.9■□□□□ 0.3
COLCA2-206ENST00000638573 TBX2Q13207 712 aaPredicted RBP16.9■□□□□ 0.3
COLCA2-206ENST00000638573 MTA1Q13330 715 aa16.9■□□□□ 0.3
COLCA2-206ENST00000638573 ARID5BQ14865 1188 aa16.9■□□□□ 0.3
COLCA2-206ENST00000638573 HNRNPA1L2Q32P51 320 aaKnown RBP16.9■□□□□ 0.3
COLCA2-206ENST00000638573 KCNT1Q5JUK3 1230 aa16.9■□□□□ 0.3
COLCA2-206ENST00000638573 SYCP2LQ5T4T6 812 aa16.9■□□□□ 0.3
COLCA2-206ENST00000638573 MMAAQ8IVH4 418 aaKnown RBP16.9■□□□□ 0.3
COLCA2-206ENST00000638573 STK40Q8N2I9 435 aa16.9■□□□□ 0.3
COLCA2-206ENST00000638573 CEP76Q8TAP6 659 aa16.9■□□□□ 0.3
COLCA2-206ENST00000638573 FOXJ1Q92949 421 aa16.9■□□□□ 0.3
COLCA2-206ENST00000638573 ALG14Q96F25 216 aa16.9■□□□□ 0.3
COLCA2-206ENST00000638573 FAM129BQ96TA1 746 aa16.9■□□□□ 0.3
COLCA2-206ENST00000638573 NPY6RQ99463 290 aa16.9■□□□□ 0.3
COLCA2-206ENST00000638573 RSPH9Q9H1X1 276 aaPredicted RBP16.9■□□□□ 0.3
COLCA2-206ENST00000638573 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.9■□□□□ 0.3
COLCA2-206ENST00000638573 ARHGAP20Q9P2F6 1191 aa16.9■□□□□ 0.3
COLCA2-206ENST00000638573 TMEM59LQ9UK28 342 aa16.9■□□□□ 0.3
COLCA2-206ENST00000638573 WASF3Q9UPY6 502 aa16.9■□□□□ 0.3
COLCA2-206ENST00000638573 ASCC3Q8N3C0 2202 aaKnown RBP16.9■□□□□ 0.3
COLCA2-206ENST00000638573 CEP192Q8TEP8 1941 aa16.9■□□□□ 0.3
COLCA2-206ENST00000638573 CACNA1EQ15878 2313 aa16.89■□□□□ 0.29
COLCA2-206ENST00000638573 A0A1W2PP55 124 aa16.89■□□□□ 0.29
COLCA2-206ENST00000638573 TYW5A2RUC4 315 aaKnown RBP16.89■□□□□ 0.29
COLCA2-206ENST00000638573 FAM47DPA6NHR8 397 aa16.89■□□□□ 0.29
COLCA2-206ENST00000638573 GOLGA6L6A8MZA4 724 aa16.89■□□□□ 0.29
COLCA2-206ENST00000638573 KCNK3O14649 394 aa16.89■□□□□ 0.29
COLCA2-206ENST00000638573 SH3BP5O60239 455 aa16.89■□□□□ 0.29
COLCA2-206ENST00000638573 KRT37O76014 449 aa16.89■□□□□ 0.29
COLCA2-206ENST00000638573 FSBPO95073 299 aa16.89■□□□□ 0.29
COLCA2-206ENST00000638573 F9P00740 461 aa16.89■□□□□ 0.29
COLCA2-206ENST00000638573 FTLP02792 175 aaPredicted RBP16.89■□□□□ 0.29
COLCA2-206ENST00000638573 MYBL1P10243 752 aa16.89■□□□□ 0.29
COLCA2-206ENST00000638573 CSRP1P21291 193 aaKnown RBP16.89■□□□□ 0.29
COLCA2-206ENST00000638573 ABCB4P21439 1286 aa16.89■□□□□ 0.29
COLCA2-206ENST00000638573 RRM1P23921 792 aa16.89■□□□□ 0.29
COLCA2-206ENST00000638573 CCR1P32246 355 aa16.89■□□□□ 0.29
COLCA2-206ENST00000638573 PSMD8P48556 350 aa16.89■□□□□ 0.29
COLCA2-206ENST00000638573 CSNK1EP49674 416 aaKnown RBP16.89■□□□□ 0.29
COLCA2-206ENST00000638573 DEUP1Q05D60 604 aa16.89■□□□□ 0.29
COLCA2-206ENST00000638573 SLC25A52Q3SY17 297 aa16.89■□□□□ 0.29
COLCA2-206ENST00000638573 POM121L1PQ3SYA9 428 aa16.89■□□□□ 0.29
COLCA2-206ENST00000638573 ALFQ53S48 1182 aa16.89■□□□□ 0.29
COLCA2-206ENST00000638573 WDR45BQ5MNZ6 344 aa16.89■□□□□ 0.29
COLCA2-206ENST00000638573 ZNF776Q68DI1 518 aaPredicted RBP16.89■□□□□ 0.29
COLCA2-206ENST00000638573 DCUN1D2Q6PH85 259 aa16.89■□□□□ 0.29
COLCA2-206ENST00000638573 EMC1Q8N766 993 aa16.89■□□□□ 0.29
COLCA2-206ENST00000638573 BIRC7Q96CA5 298 aa16.89■□□□□ 0.29
COLCA2-206ENST00000638573 ZNF653Q96CK0 615 aa16.89■□□□□ 0.29
COLCA2-206ENST00000638573 RPRD1AQ96P16 312 aaPredicted RBP16.89■□□□□ 0.29
COLCA2-206ENST00000638573 ORAI3Q9BRQ5 295 aa16.89■□□□□ 0.29
COLCA2-206ENST00000638573 EBF2Q9HAK2 575 aa16.89■□□□□ 0.29
COLCA2-206ENST00000638573 KIAA1522Q9P206 1035 aaPredicted RBP16.89■□□□□ 0.29
COLCA2-206ENST00000638573 ANGPTL2Q9UKU9 493 aa16.89■□□□□ 0.29
COLCA2-206ENST00000638573 FNDC3AQ9Y2H6 1198 aaKnown RBP16.89■□□□□ 0.29
COLCA2-206ENST00000638573 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.89■□□□□ 0.29
COLCA2-206ENST00000638573 TPRP12270 2363 aaKnown RBP16.89■□□□□ 0.29
COLCA2-206ENST00000638573 A0A1B0GTW7 788 aa16.88■□□□□ 0.29
COLCA2-206ENST00000638573 SSU72P8A0A1W2PR75 194 aa16.88■□□□□ 0.29
COLCA2-206ENST00000638573 AKR1B10O60218 316 aa16.88■□□□□ 0.29
COLCA2-206ENST00000638573 OPHN1O60890 802 aa16.88■□□□□ 0.29
COLCA2-206ENST00000638573 SEMA4FO95754 770 aa16.88■□□□□ 0.29
COLCA2-206ENST00000638573 DNTTP04053 509 aa16.88■□□□□ 0.29
COLCA2-206ENST00000638573 OXTRP30559 389 aa16.88■□□□□ 0.29
COLCA2-206ENST00000638573 EIF4A3P38919 411 aaKnown RBP16.88■□□□□ 0.29
COLCA2-206ENST00000638573 ST8SIA6P61647 398 aa16.88■□□□□ 0.29
COLCA2-206ENST00000638573 ECT2LQ008S8 904 aa16.88■□□□□ 0.29
COLCA2-206ENST00000638573 CST6Q15828 149 aa16.88■□□□□ 0.29
COLCA2-206ENST00000638573 WDR59Q6PJI9 974 aa16.88■□□□□ 0.29
COLCA2-206ENST00000638573 ZNF683Q8IZ20 524 aa16.88■□□□□ 0.29
COLCA2-206ENST00000638573 AADATQ8N5Z0 425 aa16.88■□□□□ 0.29
COLCA2-206ENST00000638573 CADM4Q8NFZ8 388 aa16.88■□□□□ 0.29
COLCA2-206ENST00000638573 GANCQ8TET4 914 aa16.88■□□□□ 0.29
COLCA2-206ENST00000638573 PTPRN2Q92932 1015 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms