RNA–Protein interactions for RNA: ENST00000637033.1

CHRNA7-223, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 5 BASIC

Gene CHRNA7, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-223	ENST00000637033	GP5	P40197	560 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	MTTP	P55157	894 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	POU5F1B	Q06416	359 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	R3HDM1	Q15032	1099 aa	Known RBP	13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	MYLK3	Q32MK0	819 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	KBTBD6	Q86V97	674 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	MTMR14	Q8NCE2	650 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	ZFP28	Q8NHY6	868 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	URGCP	Q8TCY9	931 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	QKI	Q96PU8	341 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	GALNT8	Q9NY28	637 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	RUVBL2	Q9Y230	463 aa	Known RBP	13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	TIMM13	Q9Y5L4	95 aa	Predicted RBP	13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	ZBTB24	O43167	697 aa	Predicted RBP	13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	PFDN1	O60925	122 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	IL18RAP	O95256	599 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	IL1B	P01584	269 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	PGAM1	P18669	254 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	NMBR	P28336	390 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	EPHX2	P34913	555 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	CDH15	P55291	814 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	GRM3	Q14832	879 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	FAM91A1	Q658Y4	838 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	DENND6A	Q8IWF6	608 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	MYO1H	Q8N1T3	1032 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	LRRC39	Q96DD0	335 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	RTP4	Q96DX8	246 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	KLRG1	Q96E93	195 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	RPL10L	Q96L21	214 aa	Known RBP	13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	KLHL32	Q96NJ5	620 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	FTHL17	Q9BXU8	183 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	SLC4A5	Q9BY07	1137 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	GTSE1	Q9NYZ3	720 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	VANGL2	Q9ULK5	521 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	ADAMTS5	Q9UNA0	930 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	SCN1A	P35498	2009 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	MGAM	O43451	1857 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033		G3V2L1	256 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	DES	P17661	470 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	CXCR3	P49682	368 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	GALK1	P51570	392 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	GRM1	Q13255	1194 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	LSAMP	Q13449	338 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	USP10	Q14694	798 aa	Known RBP	13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	CELF3	Q5SZQ8	465 aa	Known RBP	13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	AAGAB	Q6PD74	315 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	SLC41A1	Q8IVJ1	513 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	DNER	Q8NFT8	737 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	RAB3IL1	Q8TBN0	382 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	RNF139	Q8WU17	664 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	EDEM1	Q92611	657 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	OLFM3	Q96PB7	478 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	CAAP1	Q9H8G2	361 aa		13.3	□□□□□ -0.28
CHRNA7-223	ENST00000637033	ANKRD33B	A6NCL7	494 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	VILL	O15195	856 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	SMIM18	P0DKX4	95 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	MYBPC1	Q00872	1141 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	DYNC1I2	Q13409	638 aa	Known RBP	13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	POU6F1	Q14863	301 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	TBCC	Q15814	346 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	EPGN	Q6UW88	154 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	OTOP3	Q7RTS5	596 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	DEFB132	Q7Z7B7	95 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	KY	Q8NBH2	561 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	RNF169	Q8NCN4	708 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	SPATA22	Q8NHS9	363 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	PPWD1	Q96BP3	646 aa	Known RBP	13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	ELP3	Q9H9T3	547 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	CDHR5	Q9HBB8	845 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	ARID2	Q68CP9	1835 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	ANKRD12	Q6UB98	2062 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	KCNU1	A8MYU2	1149 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	TRIM13	O60858	407 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	TFEB	P19484	476 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	TPSB2	P20231	275 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	TKT	P29401	623 aa	Known RBP	13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	CYLC2	Q14093	348 aa	Predicted RBP	13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	VGLL4	Q14135	290 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	TPSAB1	Q15661	275 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	DPYSL2	Q16555	572 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	TBC1D25	Q3MII6	688 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	IL23R	Q5VWK5	629 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	SLC7A14	Q8TBB6	771 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	EME1	Q96AY2	570 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	KCNK16	Q96T55	309 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	ILKAP	Q9H0C8	392 aa	Predicted RBP	13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	NXF3	Q9H4D5	531 aa	Known RBP	13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	WDR41	Q9HAD4	459 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	CCDC167	Q9P0B6	97 aa		13.29	□□□□□ -0.28
CHRNA7-223	ENST00000637033	IRF6	O14896	467 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	FBXO21	O94952	628 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	PABPC4L	P0CB38	370 aa	Known RBP	13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	GRK2	P25098	689 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	MAPK10	P53779	464 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	OAZ1	P54368	228 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	MPP1	Q00013	466 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	FSCB	Q5H9T9	825 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	LRRC8B	Q6P9F7	803 aa		13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	BNC2	Q6ZN30	1099 aa	Predicted RBP	13.28	□□□□□ -0.28
CHRNA7-223	ENST00000637033	ACE2	Q9BYF1	805 aa	Predicted RBP	13.28	□□□□□ -0.28

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