RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 ZNF69Q9UC07 566 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 POLLQ9UGP5 575 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 PRSS50Q9UI38 385 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 FOXD3Q9UJU5 478 aaPredicted RBP-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 GTF3C4Q9UKN8 822 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 BRPF3Q9ULD4 1205 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 SLC45A2Q9UMX9 530 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 KIAA1024Q9UPX6 916 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 NAALAD2Q9Y3Q0 740 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 PIEZO2Q9H5I5 2752 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 CELSR2Q9HCU4 2923 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 COL4A1P02462 1669 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 CDC42BPBQ9Y5S2 1711 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 IGLV1-50A0A075B6I6 118 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 IGLV5-52A0A0A0MRZ9 124 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 TRBV5-3A0A0A0MS03 114 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 A0A0A6YYC8 382 aaPredicted RBP-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 A0A0G2JLW4 131 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 VPS37CA5D8V6 355 aaPredicted RBP-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 TRIM49BA6NDI0 452 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 SOWAHDA6NJG2 315 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 ASB14A6NK59 587 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 C3orf70A6NLC5 250 aaPredicted RBP-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 C2CD4BA6NLJ0 364 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 TBKBP1A7MCY6 615 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 HNRNPCL2B2RXH8 293 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 CHURC1-FNTBB4DL54 471 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 KCNJ18B7U540 433 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 BTBD19C9JJ37 291 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 I3L1I5 382 aaPredicted RBP-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 ACOT7O00154 380 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 SOCS3O14543 225 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 RGS13O14921 159 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 AURKAO14965 403 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 SYN3O14994 580 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 AKAP10O43572 662 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 TSPAN3O60637 253 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 CLEC3AO75596 197 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 NEURL1O76050 574 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 PRAMEF12O95522 483 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 NADKO95544 446 aaPredicted RBP-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 ACTL6AO96019 429 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 IGLV2-8P01709 118 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 HOXD4P09016 255 aaPredicted RBP-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 NPSP0C0P6 89 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 USP17L7P0C7H9 530 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 CISD3P0C7P0 127 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 MYBP10242 640 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 CHRNB1P11230 501 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 TOP1P11387 765 aaKnown RBP-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 MYCLP12524 364 aaPredicted RBP-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 ATP1A3P13637 1013 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 TCF4P15884 667 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF16P17020 682 aaPredicted RBP-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 CD53P19397 219 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 MATN1P21941 496 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 EIF4BP23588 611 aaKnown RBP-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 HTR1FP30939 366 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 CYP2C19P33261 490 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 MAPK9P45984 424 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 NPBWR1P48145 328 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 RFX5P48382 616 aaPredicted RBP-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 NRIP1P48552 1158 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 FMO5P49326 533 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 FLT3LGP49771 235 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 PEX5P50542 639 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 METAP2P50579 478 aaKnown RBP eCLIP-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 GZMMP51124 257 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 PDX1P52945 283 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 SNX16P57768 344 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 SPINK7P58062 85 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 RPS7P62081 194 aaKnown RBP-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 PPIAP62937 165 aaKnown RBP-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 KRT85P78386 507 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 BNC1Q01954 994 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 DLG1Q12959 904 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 TRAF1Q13077 416 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 ZBTB17Q13105 803 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 CHAF1AQ13111 956 aaPredicted RBP-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 MYBPHQ13203 477 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 RUNX3Q13761 415 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 AUHQ13825 339 aaKnown RBP-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 GPNMBQ14956 572 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 NECTIN1Q15223 517 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 AWAT1Q58HT5 328 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 FSCBQ5H9T9 825 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 EARS2Q5JPH6 523 aaKnown RBP-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 UTF1Q5T230 341 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 ATAD3CQ5T2N8 411 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 ADAMTSL4-AS1Q5T5F5 129 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 N4BP2L1Q5TBK1 243 aaPredicted RBP-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 FOXB2Q5VYV0 432 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 CYP4F22Q6NT55 531 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 SLC27A1Q6PCB7 646 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 BHLHB9Q6PI77 547 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 DCLRE1AQ6PJP8 1040 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 PARM1Q6UWI2 310 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 PLXDC2Q6UX71 529 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 ATF7IPQ6VMQ6 1270 aa-0.94□□□□□ -2.56
CDKL5-210ENST00000636046 DTHD1Q6ZMT9 781 aa-0.94□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms