RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 SEPT1Q8WYJ6 367 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 KHSRPQ92945 711 aaKnown RBP eCLIP15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 ASB9Q96DX5 294 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 UTP6Q9NYH9 597 aaKnown RBP15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 RCOR3Q9P2K3 495 aaPredicted RBP15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 FAF1Q9UNN5 650 aaPredicted RBP15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 INO80B-WBP1J3KQ70 363 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 RNF103O00237 685 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 NEMP1O14524 444 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 MPSTP25325 297 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 EPHA3P29320 983 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 TMEM132BQ14DG7 1078 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 CYTH1Q15438 398 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 LIPMQ5VYY2 423 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 PMF1Q6P1K2 205 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 POTEHQ6S545 545 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 LPCAT2Q7L5N7 544 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 BBS5Q8N3I7 341 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 AGR3Q8TD06 166 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 CENPIQ92674 756 aaPredicted RBP15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 USP13Q92995 863 aaPredicted RBP15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 TSNARE1Q96NA8 513 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 IL22Q9GZX6 179 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 PLGRKTQ9HBL7 147 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 PNPLA3Q9NST1 481 aa15.1■□□□□ 0.01
CACNA1A-220ENST00000635988 IGKV6-21A0A0C4DH24 114 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 MYOCOSA0A1B0GUC4 107 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 WNT10BO00744 389 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 RNASEH2AO75792 299 aaKnown RBP15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 STAU1O95793 577 aaKnown RBP15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 TFEBP19484 476 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 UBA1P22314 1058 aaKnown RBP15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 TPP2P29144 1249 aaPredicted RBP15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 GLUD2P49448 558 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 CSE1LP55060 971 aaKnown RBP15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 TNFAIP2Q03169 654 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 TNFAIP1Q13829 316 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 PTK2BQ14289 1009 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 KRT80Q6KB66 452 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 ZYG11AQ6WRX3 759 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 KLHL32Q96NJ5 620 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 AGAP3Q96P47 875 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 KCTD15Q96SI1 283 aaPredicted RBP15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 AS3MTQ9HBK9 375 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 SUCOQ9UBS9 1254 aaKnown RBP15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 ZNHIT2Q9UHR6 403 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 ANKRD6Q9Y2G4 727 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 AP4S1Q9Y587 144 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 H3BNH8 94 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 CABYRO75952 493 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 C2P06681 752 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 C8BP07358 591 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 PSMD8P48556 350 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 RAB15P59190 212 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 KLHL35Q6PF15 583 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 PAOXQ6QHF9 649 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 CARM1Q86X55 608 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 SCUBE3Q8IX30 993 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 RIN3Q8TB24 985 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 AKT1S1Q96B36 256 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 VPS45Q9NRW7 570 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 IGSF9Q9P2J2 1179 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 RNF11Q9Y3C5 154 aa15.09■□□□□ 0.01
CACNA1A-220ENST00000635988 PARP14Q460N5 1801 aa15.08■□□□□ 0.01
CACNA1A-220ENST00000635988 ANK1P16157 1881 aa15.08■□□□□ 0.01
CACNA1A-220ENST00000635988 E2F8A0AVK6 867 aa15.08■□□□□ 0.01
CACNA1A-220ENST00000635988 PAPSS1O43252 624 aaPredicted RBP15.08■□□□□ 0.01
CACNA1A-220ENST00000635988 GRID2O43424 1007 aa15.08■□□□□ 0.01
CACNA1A-220ENST00000635988 PIGNO95427 931 aa15.08■□□□□ 0.01
CACNA1A-220ENST00000635988 STAG3L1P0CL83 205 aa15.08■□□□□ 0.01
CACNA1A-220ENST00000635988 MSX2P35548 267 aaPredicted RBP15.08■□□□□ 0.01
CACNA1A-220ENST00000635988 SCNN1AP37088 669 aa15.08■□□□□ 0.01
CACNA1A-220ENST00000635988 RBP5P82980 135 aa15.08■□□□□ 0.01
CACNA1A-220ENST00000635988 IFRD2Q12894 506 aaPredicted RBP15.08■□□□□ 0.01
CACNA1A-220ENST00000635988 IKBKEQ14164 716 aa15.08■□□□□ 0.01
CACNA1A-220ENST00000635988 PDK1Q15118 436 aa15.08■□□□□ 0.01
CACNA1A-220ENST00000635988 PKDCCQ504Y2 493 aa15.08■□□□□ 0.01
CACNA1A-220ENST00000635988 TRIM67Q6ZTA4 783 aa15.08■□□□□ 0.01
CACNA1A-220ENST00000635988 TMEM192Q8IY95 271 aa15.08■□□□□ 0.01
CACNA1A-220ENST00000635988 P2RY11Q96G91 374 aa15.08■□□□□ 0.01
CACNA1A-220ENST00000635988 C11orf84Q9BUA3 381 aaPredicted RBP15.08■□□□□ 0.01
CACNA1A-220ENST00000635988 ACE2Q9BYF1 805 aaPredicted RBP15.08■□□□□ 0.01
CACNA1A-220ENST00000635988 RRN3Q9NYV6 651 aa15.08■□□□□ 0.01
CACNA1A-220ENST00000635988 LTBP4Q8N2S1 1624 aa15.08■□□□□ 0
CACNA1A-220ENST00000635988 F5H423 210 aaPredicted RBP15.08■□□□□ 0
CACNA1A-220ENST00000635988 B4GALT5O43286 388 aa15.08■□□□□ 0
CACNA1A-220ENST00000635988 VAPBO95292 243 aa15.08■□□□□ 0
CACNA1A-220ENST00000635988 CHRNGP07510 517 aa15.08■□□□□ 0
CACNA1A-220ENST00000635988 HSPA1AP0DMV8 641 aaKnown RBP15.08■□□□□ 0
CACNA1A-220ENST00000635988 HSPA1BP0DMV9 641 aaKnown RBP15.08■□□□□ 0
CACNA1A-220ENST00000635988 CYP2C8P10632 490 aa15.08■□□□□ 0
CACNA1A-220ENST00000635988 YY1P25490 414 aa15.08■□□□□ 0
CACNA1A-220ENST00000635988 PSMB4P28070 264 aa15.08■□□□□ 0
CACNA1A-220ENST00000635988 DPP6P42658 865 aa15.08■□□□□ 0
CACNA1A-220ENST00000635988 GRIA4P48058 902 aa15.08■□□□□ 0
CACNA1A-220ENST00000635988 TRIM25Q14258 630 aaKnown RBP15.08■□□□□ 0
CACNA1A-220ENST00000635988 NXNQ6DKJ4 435 aa15.08■□□□□ 0
CACNA1A-220ENST00000635988 TMEM135Q86UB9 458 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms