RNA–Protein interactions for RNA: ENST00000635325.1

UBASH3A-209, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best)

Gene UBASH3A, Length 2,095 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-209ENST00000635325 TRHDEQ9UKU6 1024 aa12.72□□□□□ -0.37
UBASH3A-209ENST00000635325 NLRC5Q86WI3 1866 aa12.72□□□□□ -0.37
UBASH3A-209ENST00000635325 PTPRDP23468 1912 aa12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 SHROOM3Q8TF72 1996 aa12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 ATP9BO43861 1147 aa12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 SNNO75324 88 aaPredicted RBP12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 CKBP12277 381 aa12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 TYMPP19971 482 aa12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 ZNF135P52742 658 aaPredicted RBP12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 PDE1BQ01064 536 aa12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 NAB1Q13506 487 aa12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 MAPRE1Q15691 268 aaKnown RBP12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 SPDYAQ5MJ70 313 aa12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 TRAF7Q6Q0C0 670 aa12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 CMC1Q7Z7K0 106 aa12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 ALYREFQ86V81 257 aaKnown RBP12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 CEP57Q86XR8 500 aa12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 ARID3BQ8IVW6 561 aaPredicted RBP12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 ARHGAP12Q8IWW6 846 aa12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 MAGEC3Q8TD91 643 aa12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 TBC1D10AQ9BXI6 508 aa12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 SMOC2Q9H3U7 446 aa12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 CHRAC1Q9NRG0 131 aa12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 NDFIP2Q9NV92 336 aa12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 OSER1Q9NX31 292 aa12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 BFARQ9NZS9 450 aa12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 PCDHB8Q9UN66 801 aa12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 MTO1Q9Y2Z2 717 aaKnown RBP12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 BPTFQ12830 3046 aa12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 TTC3P53804 2025 aa12.71□□□□□ -0.37
UBASH3A-209ENST00000635325 ERI2A8K979 691 aaKnown RBP12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 INPPL1O15357 1258 aa12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 BIRC5O15392 142 aa12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 DNAJC6O75061 913 aa12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 GP5P40197 560 aa12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 GPR15P49685 360 aa12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 ZBTB16Q05516 673 aa12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 E2F5Q15329 346 aa12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 ANKRD20A4Q4UJ75 823 aa12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 FASTKD1Q53R41 847 aaKnown RBP12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 HSP90AA5PQ58FG0 334 aa12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 BTBD8Q5XKL5 378 aa12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 ATG16L1Q676U5 607 aa12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 MBLAC2Q68D91 279 aa12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 ITPRIPL1Q6GPH6 555 aa12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 GLB1LQ6UWU2 654 aa12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 KYAT3Q6YP21 454 aaKnown RBP12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 BEND5Q7L4P6 421 aa12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 SCN4BQ8IWT1 228 aa12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 TRIM42Q8IWZ5 723 aa12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 SPATA22Q8NHS9 363 aa12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 ACMSDQ8TDX5 336 aa12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 SH3TC2Q8TF17 1288 aa12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 AGAP11Q8TF27 550 aa12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 INPP5DQ92835 1189 aa12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 PTCD3Q96EY7 689 aaKnown RBP12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 FCRL2Q96LA5 508 aaPredicted RBP12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 VAT1Q99536 393 aa12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 RGS18Q9NS28 235 aa12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 ABCC13Q9NSE7 274 aa12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 ABI2Q9NYB9 513 aaPredicted RBP12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 DNAJB4Q9UDY4 337 aa12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 L3MBTL1Q9Y468 752 aa12.71□□□□□ -0.38
UBASH3A-209ENST00000635325 A0A1W2PQH9 124 aa12.7□□□□□ -0.38
UBASH3A-209ENST00000635325 CCDC78A2IDD5 438 aa12.7□□□□□ -0.38
UBASH3A-209ENST00000635325 PLIN3O60664 434 aa12.7□□□□□ -0.38
UBASH3A-209ENST00000635325 HAUS5O94927 633 aa12.7□□□□□ -0.38
UBASH3A-209ENST00000635325 MOCS2O96007 188 aaPredicted RBP12.7□□□□□ -0.38
UBASH3A-209ENST00000635325 KITP10721 976 aa12.7□□□□□ -0.38
UBASH3A-209ENST00000635325 SKIP12755 728 aa12.7□□□□□ -0.38
UBASH3A-209ENST00000635325 KCNA4P22459 653 aa12.7□□□□□ -0.38
UBASH3A-209ENST00000635325 RPL10AP62906 217 aaKnown RBP12.7□□□□□ -0.38
UBASH3A-209ENST00000635325 DSC1Q08554 894 aa12.7□□□□□ -0.38
UBASH3A-209ENST00000635325 MANEALQ5VSG8 457 aa12.7□□□□□ -0.38
UBASH3A-209ENST00000635325 C4orf50Q6ZRC1 276 aa12.7□□□□□ -0.38
UBASH3A-209ENST00000635325 STRA8Q7Z7C7 330 aa12.7□□□□□ -0.38
UBASH3A-209ENST00000635325 ZNF778Q96MU6 729 aa12.7□□□□□ -0.38
UBASH3A-209ENST00000635325 RAB3IPQ96QF0 476 aaPredicted RBP12.7□□□□□ -0.38
UBASH3A-209ENST00000635325 MIPEPQ99797 713 aa12.7□□□□□ -0.38
UBASH3A-209ENST00000635325 CPNE1Q99829 537 aa12.7□□□□□ -0.38
UBASH3A-209ENST00000635325 SAR1AQ9NR31 198 aa12.7□□□□□ -0.38
UBASH3A-209ENST00000635325 ZNF358Q9NW07 568 aa12.7□□□□□ -0.38
UBASH3A-209ENST00000635325 ARMCX1Q9P291 453 aa12.7□□□□□ -0.38
UBASH3A-209ENST00000635325 TXNDC16Q9P2K2 825 aa12.7□□□□□ -0.38
UBASH3A-209ENST00000635325 HBS1LQ9Y450 684 aaKnown RBP12.7□□□□□ -0.38
UBASH3A-209ENST00000635325 PATJQ8NI35 1801 aa12.7□□□□□ -0.38
UBASH3A-209ENST00000635325 GOLGA8TH3BQL2 631 aa12.69□□□□□ -0.38
UBASH3A-209ENST00000635325 FCHO1O14526 889 aa12.69□□□□□ -0.38
UBASH3A-209ENST00000635325 TRAFD1O14545 582 aaPredicted RBP12.69□□□□□ -0.38
UBASH3A-209ENST00000635325 GLRA3O75311 464 aa12.69□□□□□ -0.38
UBASH3A-209ENST00000635325 LYPLA1O75608 230 aaPredicted RBP12.69□□□□□ -0.38
UBASH3A-209ENST00000635325 USP1O94782 785 aa12.69□□□□□ -0.38
UBASH3A-209ENST00000635325 CCR1P32246 355 aa12.69□□□□□ -0.38
UBASH3A-209ENST00000635325 DDR2Q16832 855 aa12.69□□□□□ -0.38
UBASH3A-209ENST00000635325 STXBP5Q5T5C0 1151 aa12.69□□□□□ -0.38
UBASH3A-209ENST00000635325 SWT1Q5T5J6 900 aaKnown RBP12.69□□□□□ -0.38
UBASH3A-209ENST00000635325 TEDDM1Q5T9Z0 273 aa12.69□□□□□ -0.38
UBASH3A-209ENST00000635325 C14orf80Q86SX3 495 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms