RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 MESP2Q0VG99 397 aa19.17■□□□□ 0.66
PNKP-224ENST00000631020 CRY1Q16526 586 aa19.17■□□□□ 0.66
PNKP-224ENST00000631020 CSRP2Q16527 193 aa19.17■□□□□ 0.66
PNKP-224ENST00000631020 ALFQ53S48 1182 aa19.17■□□□□ 0.66
PNKP-224ENST00000631020 PPP6R3Q5H9R7 873 aaPredicted RBP19.17■□□□□ 0.66
PNKP-224ENST00000631020 LRRC31Q6UY01 552 aa19.17■□□□□ 0.66
PNKP-224ENST00000631020 C11orf74Q86VG3 221 aa19.17■□□□□ 0.66
PNKP-224ENST00000631020 C17orf53Q8N3J3 647 aaPredicted RBP19.17■□□□□ 0.66
PNKP-224ENST00000631020 IL17RCQ8NAC3 791 aa19.17■□□□□ 0.66
PNKP-224ENST00000631020 HJURPQ8NCD3 748 aaPredicted RBP19.17■□□□□ 0.66
PNKP-224ENST00000631020 FAM71BQ8TC56 605 aa19.17■□□□□ 0.66
PNKP-224ENST00000631020 RAPGEF5Q92565 580 aa19.17■□□□□ 0.66
PNKP-224ENST00000631020 PCDH18Q9HCL0 1135 aa19.17■□□□□ 0.66
PNKP-224ENST00000631020 POLR3BQ9NW08 1133 aaPredicted RBP19.17■□□□□ 0.66
PNKP-224ENST00000631020 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.17■□□□□ 0.66
PNKP-224ENST00000631020 PPARGC1AQ9UBK2 798 aaKnown RBP19.17■□□□□ 0.66
PNKP-224ENST00000631020 FBXO10Q9UK96 956 aa19.17■□□□□ 0.66
PNKP-224ENST00000631020 STARD13Q9Y3M8 1113 aa19.17■□□□□ 0.66
PNKP-224ENST00000631020 TRIM24O15164 1050 aa19.16■□□□□ 0.66
PNKP-224ENST00000631020 IL4RP24394 825 aa19.16■□□□□ 0.66
PNKP-224ENST00000631020 SEC13P55735 322 aa19.16■□□□□ 0.66
PNKP-224ENST00000631020 SPEM2Q0P670 501 aa19.16■□□□□ 0.66
PNKP-224ENST00000631020 EOGTQ5NDL2 527 aa19.16■□□□□ 0.66
PNKP-224ENST00000631020 RABGAP1LQ5R372 815 aa19.16■□□□□ 0.66
PNKP-224ENST00000631020 TRMT11Q7Z4G4 463 aaKnown RBP19.16■□□□□ 0.66
PNKP-224ENST00000631020 SYCE1Q8N0S2 351 aa19.16■□□□□ 0.66
PNKP-224ENST00000631020 TERB1Q8NA31 727 aa19.16■□□□□ 0.66
PNKP-224ENST00000631020 WFDC5Q8TCV5 224 aa19.16■□□□□ 0.66
PNKP-224ENST00000631020 XPO6Q96QU8 1125 aaKnown RBP19.16■□□□□ 0.66
PNKP-224ENST00000631020 KCND1Q9NSA2 647 aa19.16■□□□□ 0.66
PNKP-224ENST00000631020 CWC15Q9P013 229 aaKnown RBP19.16■□□□□ 0.66
PNKP-224ENST00000631020 ZNF212Q9UDV6 495 aa19.16■□□□□ 0.66
PNKP-224ENST00000631020 PACSIN2Q9UNF0 486 aaPredicted RBP19.16■□□□□ 0.66
PNKP-224ENST00000631020 PCDHGA5Q9Y5G8 931 aa19.16■□□□□ 0.66
PNKP-224ENST00000631020 GOT1P17174 413 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 PEX5P50542 639 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 CDH6P55285 790 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 KDSRQ06136 332 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 RWDD4Q6NW29 188 aaKnown RBP19.15■□□□□ 0.66
PNKP-224ENST00000631020 PEX26Q7Z412 305 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 TSC1Q92574 1164 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 TBC1D31Q96DN5 1066 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 EPAS1Q99814 870 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 ZYG11BQ9C0D3 744 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 SEMA4GQ9NTN9 838 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 AMFRQ9UKV5 643 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 PCDHA3Q9Y5H8 950 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 TBC1D3BA6NDS4 549 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 C3orf70A6NLC5 250 aaPredicted RBP19.15■□□□□ 0.66
PNKP-224ENST00000631020 PSTPIP1O43586 416 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 ALDH1A2O94788 518 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 EPN2O95208 641 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 CISD3P0C7P0 127 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 KDELR1P24390 212 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 CTNNA2P26232 953 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 EPHB2P29323 1055 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 CTNNA1P35221 906 aaKnown RBP19.15■□□□□ 0.66
PNKP-224ENST00000631020 MMRN1Q13201 1228 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 RSPO4Q2I0M5 234 aaPredicted RBP19.15■□□□□ 0.66
PNKP-224ENST00000631020 FSCBQ5H9T9 825 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 TTC39BQ5VTQ0 682 aaPredicted RBP19.15■□□□□ 0.66
PNKP-224ENST00000631020 ANKS1BQ7Z6G8 1248 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 KBTBD6Q86V97 674 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 NLRP14Q86W24 1093 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 SFTPA1Q8IWL2 248 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 ALLCQ8N6M5 410 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 TXNDC5Q8NBS9 432 aaKnown RBP19.15■□□□□ 0.66
PNKP-224ENST00000631020 KCTD6Q8NC69 237 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 OR52K2Q8NGK3 314 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 ALG3Q92685 438 aa19.15■□□□□ 0.66
PNKP-224ENST00000631020 PLXND1Q9Y4D7 1925 aa19.14■□□□□ 0.66
PNKP-224ENST00000631020 DOCK4Q8N1I0 1966 aa19.14■□□□□ 0.65
PNKP-224ENST00000631020 A0A1B0GVM2 712 aa19.14■□□□□ 0.65
PNKP-224ENST00000631020 TCAF2A6NFQ2 919 aa19.14■□□□□ 0.65
PNKP-224ENST00000631020 EEF2KO00418 725 aaKnown RBP19.14■□□□□ 0.65
PNKP-224ENST00000631020 LUC7L3O95232 432 aaKnown RBP19.14■□□□□ 0.65
PNKP-224ENST00000631020 KLF8O95600 359 aaPredicted RBP19.14■□□□□ 0.65
PNKP-224ENST00000631020 TIE1P35590 1138 aa19.14■□□□□ 0.65
PNKP-224ENST00000631020 HCAR3P49019 387 aa19.14■□□□□ 0.65
PNKP-224ENST00000631020 CDH4P55283 916 aa19.14■□□□□ 0.65
PNKP-224ENST00000631020 TPI1P60174 286 aa19.14■□□□□ 0.65
PNKP-224ENST00000631020 DPYSL3Q14195 570 aa19.14■□□□□ 0.65
PNKP-224ENST00000631020 PDK2Q15119 407 aa19.14■□□□□ 0.65
PNKP-224ENST00000631020 PLK5Q496M5 336 aa19.14■□□□□ 0.65
PNKP-224ENST00000631020 USP39Q53GS9 565 aaKnown RBP19.14■□□□□ 0.65
PNKP-224ENST00000631020 GRAMD4Q6IC98 578 aa19.14■□□□□ 0.65
PNKP-224ENST00000631020 RFX8Q6ZV50 586 aa19.14■□□□□ 0.65
PNKP-224ENST00000631020 TFAP2DQ7Z6R9 452 aa19.14■□□□□ 0.65
PNKP-224ENST00000631020 CARNMT1Q8N4J0 409 aa19.14■□□□□ 0.65
PNKP-224ENST00000631020 CCDC33Q8N5R6 958 aa19.14■□□□□ 0.65
PNKP-224ENST00000631020 TRIM58Q8NG06 486 aa19.14■□□□□ 0.65
PNKP-224ENST00000631020 HES6Q96HZ4 224 aa19.14■□□□□ 0.65
PNKP-224ENST00000631020 LMLNQ96KR4 655 aa19.14■□□□□ 0.65
PNKP-224ENST00000631020 CSPG4P5Q96PW8 444 aa19.14■□□□□ 0.65
PNKP-224ENST00000631020 POLMQ9NP87 494 aaPredicted RBP19.14■□□□□ 0.65
PNKP-224ENST00000631020 NDFIP2Q9NV92 336 aa19.14■□□□□ 0.65
PNKP-224ENST00000631020 DNAJC17Q9NVM6 304 aaKnown RBP19.14■□□□□ 0.65
PNKP-224ENST00000631020 SDK1Q7Z5N4 2213 aa19.14■□□□□ 0.65
PNKP-224ENST00000631020 CCDC66A2RUB6 948 aa19.13■□□□□ 0.65
PNKP-224ENST00000631020 TYW5A2RUC4 315 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms