RNA–Protein interactions for RNA: ENST00000627450.2

PDXDC1-218, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-218ENST00000627450 CCDC13Q8IYE1 715 aa13.82□□□□□ -0.2
PDXDC1-218ENST00000627450 UMODL1-AS1Q8N2C9 162 aa13.82□□□□□ -0.2
PDXDC1-218ENST00000627450 SH3RF2Q8TEC5 729 aa13.82□□□□□ -0.2
PDXDC1-218ENST00000627450 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.82□□□□□ -0.2
PDXDC1-218ENST00000627450 RBM15Q96T37 977 aaKnown RBP eCLIP13.82□□□□□ -0.26e-7■■■■■ 36.2
PDXDC1-218ENST00000627450 IPO11Q9UI26 975 aaKnown RBP13.82□□□□□ -0.2
PDXDC1-218ENST00000627450 GLP2RO95838 553 aa13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 CD68P34810 354 aaPredicted RBP13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 KCNC3Q14003 757 aa13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 KCNJ11Q14654 390 aa13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 POLD3Q15054 466 aaPredicted RBP13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 PRSS36Q5K4E3 855 aa13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 Q6ZNB5 142 aa13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 LZTR1Q8N653 840 aa13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 CNTD1Q8N815 330 aa13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 OR7D4Q8NG98 312 aa13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 USP13Q92995 863 aaPredicted RBP13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 C9orf72Q96LT7 481 aa13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 EPB41L4BQ9H329 900 aa13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 ZDHHC7Q9NXF8 308 aa13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 UBP1Q9NZI7 540 aa13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 SH3BP1Q9Y3L3 701 aa13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 RAMP2O60895 175 aa13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 PPFIA2O75334 1257 aa13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 CCNB1P14635 433 aa13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 PMS2P54278 862 aa13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 FSCBQ5H9T9 825 aa13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 RARS2Q5T160 578 aaKnown RBP13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 ZCCHC9Q8N567 271 aaKnown RBP13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 BBOF1Q8ND07 529 aa13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 MRPL38Q96DV4 380 aaKnown RBP13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 CDC42EP4Q9H3Q1 356 aaKnown RBP13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 TMEM51Q9NW97 253 aa13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 MRPS23Q9Y3D9 190 aaKnown RBP13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 RAD54BQ9Y620 910 aa13.81□□□□□ -0.2
PDXDC1-218ENST00000627450 ACSL3O95573 720 aa13.8□□□□□ -0.2
PDXDC1-218ENST00000627450 GLDCP23378 1020 aa13.8□□□□□ -0.2
PDXDC1-218ENST00000627450 BMP8BP34820 402 aa13.8□□□□□ -0.2
PDXDC1-218ENST00000627450 SPARCL1Q14515 664 aa13.8□□□□□ -0.2
PDXDC1-218ENST00000627450 KYNUQ16719 465 aa13.8□□□□□ -0.2
PDXDC1-218ENST00000627450 TCEAL5Q5H9L2 206 aa13.8□□□□□ -0.2
PDXDC1-218ENST00000627450 CAPN12Q6ZSI9 719 aa13.8□□□□□ -0.2
PDXDC1-218ENST00000627450 OTOP3Q7RTS5 596 aa13.8□□□□□ -0.2
PDXDC1-218ENST00000627450 PDCD7Q8N8D1 485 aaKnown RBP13.8□□□□□ -0.2
PDXDC1-218ENST00000627450 WFDC5Q8TCV5 224 aa13.8□□□□□ -0.2
PDXDC1-218ENST00000627450 PABPC5Q96DU9 382 aaKnown RBP13.8□□□□□ -0.2
PDXDC1-218ENST00000627450 ZIM3Q96PE6 472 aa13.8□□□□□ -0.2
PDXDC1-218ENST00000627450 GORASP1Q9BQQ3 440 aa13.8□□□□□ -0.2
PDXDC1-218ENST00000627450 AGPSO00116 658 aa13.8□□□□□ -0.2
PDXDC1-218ENST00000627450 TBL1XO60907 577 aa13.8□□□□□ -0.2
PDXDC1-218ENST00000627450 TEX44Q53QW1 395 aa13.8□□□□□ -0.2
PDXDC1-218ENST00000627450 RABGAP1LQ5R372 815 aa13.8□□□□□ -0.2
PDXDC1-218ENST00000627450 ANKMY2Q8IV38 441 aa13.8□□□□□ -0.2
PDXDC1-218ENST00000627450 AZIN2Q96A70 460 aa13.8□□□□□ -0.2
PDXDC1-218ENST00000627450 TASP1Q9H6P5 420 aa13.8□□□□□ -0.2
PDXDC1-218ENST00000627450 SAYSD1Q9NPB0 183 aa13.8□□□□□ -0.2
PDXDC1-218ENST00000627450 TDP1Q9NUW8 608 aa13.8□□□□□ -0.2
PDXDC1-218ENST00000627450 CLEC4EQ9ULY5 219 aa13.8□□□□□ -0.2
PDXDC1-218ENST00000627450 SHOC2Q9UQ13 582 aa13.8□□□□□ -0.2
PDXDC1-218ENST00000627450 TTC24A2A3L6 582 aaPredicted RBP13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 OPHN1O60890 802 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 USP12O75317 370 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 STK10O94804 968 aaKnown RBP13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 SHBGP04278 402 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 NFKB1P19838 968 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 CCNCP24863 283 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 NDST2P52849 883 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 CAV1Q03135 178 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 HYAL1Q12794 435 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 SLC29A2Q14542 456 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 C5orf22Q49AR2 442 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 RTL10Q7L3V2 364 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 ARID3BQ8IVW6 561 aaPredicted RBP13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 CARNMT1Q8N4J0 409 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 MREGQ8N565 214 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 TMA16Q96EY4 203 aaKnown RBP13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 SPON2Q9BUD6 331 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 ZNF576Q9H609 170 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 STOML2Q9UJZ1 356 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 LSM7Q9UK45 103 aaKnown RBP13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 PLAAQ9Y263 795 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 E7EVH7 732 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 PEX11BO96011 259 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 ETFBP38117 255 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 CDH4P55283 916 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 SLC10A7Q0GE19 358 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 PDIA2Q13087 525 aaKnown RBP13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 HIF1AQ16665 826 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 ARHGAP15Q53QZ3 475 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 HTR3DQ70Z44 454 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 PCGF5Q86SE9 256 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 ZBED8Q8IZ13 594 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 IQCKQ8N0W5 287 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 AGGF1Q8N302 714 aaeCLIP13.79□□□□□ -0.27e-7■□□□□ 9.1
PDXDC1-218ENST00000627450 SPATA22Q8NHS9 363 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 TSGA13Q96PP4 275 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 FERMT1Q9BQL6 677 aa13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 WDR83Q9BRX9 315 aaKnown RBP13.79□□□□□ -0.2
PDXDC1-218ENST00000627450 LMAN2LQ9H0V9 348 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms