RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 FAM71BQ8TC56 605 aa3.4□□□□□ -1.87
PTP4A2-220ENST00000627328 IPO4Q8TEX9 1081 aaKnown RBP3.4□□□□□ -1.87
PTP4A2-220ENST00000627328 EID2BQ96D98 161 aa3.4□□□□□ -1.87
PTP4A2-220ENST00000627328 ZNF419Q96HQ0 510 aaPredicted RBP3.4□□□□□ -1.87
PTP4A2-220ENST00000627328 ZNF333Q96JL9 665 aa3.4□□□□□ -1.87
PTP4A2-220ENST00000627328 SGCZQ96LD1 299 aa3.4□□□□□ -1.87
PTP4A2-220ENST00000627328 NOTCH4Q99466 2003 aa3.4□□□□□ -1.87
PTP4A2-220ENST00000627328 WDR77Q9BQA1 342 aaPredicted RBP3.4□□□□□ -1.87
PTP4A2-220ENST00000627328 ACTR5Q9H9F9 607 aaPredicted RBP3.4□□□□□ -1.87
PTP4A2-220ENST00000627328 ARFGAP3Q9NP61 516 aa3.4□□□□□ -1.87
PTP4A2-220ENST00000627328 IGSF9Q9P2J2 1179 aa3.4□□□□□ -1.87
PTP4A2-220ENST00000627328 RAB21Q9UL25 225 aa3.4□□□□□ -1.87
PTP4A2-220ENST00000627328 FZD10Q9ULW2 581 aa3.4□□□□□ -1.87
PTP4A2-220ENST00000627328 CNTN6Q9UQ52 1028 aa3.4□□□□□ -1.87
PTP4A2-220ENST00000627328 PKP3Q9Y446 797 aa3.4□□□□□ -1.87
PTP4A2-220ENST00000627328 TRBV5-7A0A0A0MS05 114 aa3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 KIF28PB7ZC32 967 aa3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 MS4A18H0YCH9 400 aa3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 VWA5AO00534 786 aa3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 DNPH1O43598 174 aa3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 GLUD1P00367 558 aa3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 KLRK1P26718 216 aa3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 AKT1P31749 480 aa3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 TECP42680 631 aa3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 PCP4P48539 62 aa3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 GLUD2P49448 558 aa3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 GAS1P54826 345 aa3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 PTK2BQ14289 1009 aa3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 NFATC4Q14934 902 aa3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 SHBQ15464 509 aa3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 RBM23Q86U06 439 aaKnown RBP3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 TMEM200AQ86VY9 491 aa3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 FAM217AQ8IXS0 508 aa3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 FAM186BQ8IYM0 893 aa3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 CADM3Q8N126 398 aa3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 IP6K1Q92551 441 aa3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 TM6SF1Q9BZW5 370 aa3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 B3GNT4Q9C0J1 378 aa3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 CDT1Q9H211 546 aa3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 ARNT2Q9HBZ2 717 aa3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 CHST12Q9NRB3 414 aa3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 TXLNGQ9NUQ3 528 aa3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 TMLHEQ9NVH6 421 aa3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 MAGED2Q9UNF1 606 aaPredicted RBP3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 INSL5Q9Y5Q6 135 aa3.39□□□□□ -1.87
PTP4A2-220ENST00000627328 FAM90A18PA6NE21 464 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 FAM90A16PA6NEW6 464 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 FAM90A9PA6NNJ1 464 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 BECN2A8MW95 431 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 FAM90A5PA8MXJ8 464 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 FFAR2O15552 330 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 RGS14O43566 566 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 ASNA1O43681 348 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 LCATP04180 440 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 PRSS2P07478 247 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 ACAA1P09110 424 aaPredicted RBP3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 FAM90A15PP0C7V4 464 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 FAM90A14PP0C7W9 464 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 PKMP14618 531 aaKnown RBP3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 CHRNB2P17787 502 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 TNFSF8P32971 234 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 RCAN1P53805 252 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 FAM3BP58499 235 aaPredicted RBP3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 DSCR9P59020 149 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 SELENOVP59797 346 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 SPARCL1Q14515 664 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 STARD3Q14849 445 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 DUSP6Q16828 381 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 ZACNQ401N2 412 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 INO80DQ53TQ3 878 aaPredicted RBP3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 C9orf50Q5SZB4 431 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 C8orf82Q6P1X6 216 aaPredicted RBP3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 NFRKBQ6P4R8 1299 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 RAB11FIP2Q7L804 512 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 CTU1Q7Z7A3 348 aaKnown RBP3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 SRLQ86TD4 932 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 ZDHHC23Q8IYP9 409 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 ENGASEQ8NFI3 743 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 TMEM163Q8TC26 289 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 SLC2A12Q8TD20 617 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 PARD3BQ8TEW8 1205 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 HMGB4Q8WW32 186 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 C18orf8Q96DM3 657 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 SORBS1Q9BX66 1292 aaKnown RBP3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 MAGEH1Q9H213 219 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 C6orf106Q9H6K1 298 aaPredicted RBP3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 ZNF304Q9HCX3 659 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 NLRC4Q9NPP4 1024 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 ZDHHC7Q9NXF8 308 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 IL36RNQ9UBH0 155 aa3.38□□□□□ -1.87
PTP4A2-220ENST00000627328 TTC3P53804 2025 aa3.37□□□□□ -1.87
PTP4A2-220ENST00000627328 INAFM1C9JVW0 142 aa3.37□□□□□ -1.87
PTP4A2-220ENST00000627328 HNRNPRO43390 633 aaKnown RBP3.37□□□□□ -1.87
PTP4A2-220ENST00000627328 PRC1O43663 620 aa3.37□□□□□ -1.87
PTP4A2-220ENST00000627328 KIF1CO43896 1103 aaKnown RBP3.37□□□□□ -1.87
PTP4A2-220ENST00000627328 ITGA2BP08514 1039 aa3.37□□□□□ -1.87
PTP4A2-220ENST00000627328 PLA2G2AP14555 144 aa3.37□□□□□ -1.87
PTP4A2-220ENST00000627328 ABCB4P21439 1286 aa3.37□□□□□ -1.87
PTP4A2-220ENST00000627328 HOXA11P31270 313 aaPredicted RBP3.37□□□□□ -1.87
PTP4A2-220ENST00000627328 PPM1AP35813 382 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms