RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 KRT1P04264 644 aa15.11■□□□□ 0.01
PNKP-221ENST00000627317 RHOCP08134 193 aa15.11■□□□□ 0.01
PNKP-221ENST00000627317 CISD3P0C7P0 127 aa15.11■□□□□ 0.01
PNKP-221ENST00000627317 PABPC1P11940 636 aaKnown RBP15.11■□□□□ 0.01
PNKP-221ENST00000627317 GOT1P17174 413 aa15.11■□□□□ 0.01
PNKP-221ENST00000627317 HLA-FP30511 346 aa15.11■□□□□ 0.01
PNKP-221ENST00000627317 OR1E1P30953 314 aa15.11■□□□□ 0.01
PNKP-221ENST00000627317 MAPKAPK2P49137 400 aa15.11■□□□□ 0.01
PNKP-221ENST00000627317 MRPS21P82921 87 aaKnown RBP15.11■□□□□ 0.01
PNKP-221ENST00000627317 LMAN2Q12907 356 aa15.11■□□□□ 0.01
PNKP-221ENST00000627317 HSF5Q4G112 596 aaPredicted RBP15.11■□□□□ 0.01
PNKP-221ENST00000627317 C2orf27AQ580R0 203 aa15.11■□□□□ 0.01
PNKP-221ENST00000627317 C6orf118Q5T5N4 469 aa15.11■□□□□ 0.01
PNKP-221ENST00000627317 EMC10Q5UCC4 262 aa15.11■□□□□ 0.01
PNKP-221ENST00000627317 RFX8Q6ZV50 586 aa15.11■□□□□ 0.01
PNKP-221ENST00000627317 RASSF3Q86WH2 238 aa15.11■□□□□ 0.01
PNKP-221ENST00000627317 DCLK2Q8N568 766 aa15.11■□□□□ 0.01
PNKP-221ENST00000627317 ALLCQ8N6M5 410 aa15.11■□□□□ 0.01
PNKP-221ENST00000627317 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.11■□□□□ 0.01
PNKP-221ENST00000627317 LRRC57Q8N9N7 239 aa15.11■□□□□ 0.01
PNKP-221ENST00000627317 KCTD6Q8NC69 237 aa15.11■□□□□ 0.01
PNKP-221ENST00000627317 ALS2CR12Q96Q35 445 aa15.11■□□□□ 0.01
PNKP-221ENST00000627317 CALN1Q9BXU9 219 aa15.11■□□□□ 0.01
PNKP-221ENST00000627317 RETREG1Q9H6L5 497 aa15.11■□□□□ 0.01
PNKP-221ENST00000627317 DDX56Q9NY93 547 aaKnown RBP15.11■□□□□ 0.01
PNKP-221ENST00000627317 KIAA1522Q9P206 1035 aaPredicted RBP15.11■□□□□ 0.01
PNKP-221ENST00000627317 NEU3Q9UQ49 428 aa15.11■□□□□ 0.01
PNKP-221ENST00000627317 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.11■□□□□ 0.01
PNKP-221ENST00000627317 CAPN6Q9Y6Q1 641 aa15.11■□□□□ 0.01
PNKP-221ENST00000627317 CACNA1AO00555 2505 aa15.1■□□□□ 0.01
PNKP-221ENST00000627317 LRRD1A4D1F6 860 aa15.1■□□□□ 0.01
PNKP-221ENST00000627317 APBB3O95704 486 aa15.1■□□□□ 0.01
PNKP-221ENST00000627317 CD70P32970 193 aa15.1■□□□□ 0.01
PNKP-221ENST00000627317 PDK2Q15119 407 aa15.1■□□□□ 0.01
PNKP-221ENST00000627317 GEN1Q17RS7 908 aa15.1■□□□□ 0.01
PNKP-221ENST00000627317 ATP13A4Q4VNC1 1196 aa15.1■□□□□ 0.01
PNKP-221ENST00000627317 FSCBQ5H9T9 825 aa15.1■□□□□ 0.01
PNKP-221ENST00000627317 ARTNQ5T4W7 220 aa15.1■□□□□ 0.01
PNKP-221ENST00000627317 LAIR1Q6GTX8 287 aa15.1■□□□□ 0.01
PNKP-221ENST00000627317 CXorf57Q6NSI4 855 aaKnown RBP15.1■□□□□ 0.01
PNKP-221ENST00000627317 TMEM92Q6UXU6 159 aa15.1■□□□□ 0.01
PNKP-221ENST00000627317 PEX26Q7Z412 305 aa15.1■□□□□ 0.01
PNKP-221ENST00000627317 SETD3Q86TU7 594 aaPredicted RBP15.1■□□□□ 0.01
PNKP-221ENST00000627317 MAP7D3Q8IWC1 876 aa15.1■□□□□ 0.01
PNKP-221ENST00000627317 AHI1Q8N157 1196 aa15.1■□□□□ 0.01
PNKP-221ENST00000627317 RTL3Q8N8U3 475 aaKnown RBP15.1■□□□□ 0.01
PNKP-221ENST00000627317 KCNV2Q8TDN2 545 aa15.1■□□□□ 0.01
PNKP-221ENST00000627317 GAB3Q8WWW8 586 aa15.1■□□□□ 0.01
PNKP-221ENST00000627317 CIPCQ9C0C6 399 aa15.1■□□□□ 0.01
PNKP-221ENST00000627317 MUC3BQ9H195 1237 aa15.1■□□□□ 0.01
PNKP-221ENST00000627317 CD248Q9HCU0 757 aa15.1■□□□□ 0.01
PNKP-221ENST00000627317 TMEM248Q9NWD8 314 aa15.1■□□□□ 0.01
PNKP-221ENST00000627317 DONSONQ9NYP3 566 aa15.1■□□□□ 0.01
PNKP-221ENST00000627317 CWC15Q9P013 229 aaKnown RBP15.1■□□□□ 0.01
PNKP-221ENST00000627317 RCOR3Q9P2K3 495 aaPredicted RBP15.1■□□□□ 0.01
PNKP-221ENST00000627317 STARD13Q9Y3M8 1113 aa15.1■□□□□ 0.01
PNKP-221ENST00000627317 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.1■□□□□ 0.01
PNKP-221ENST00000627317 DOCK4Q8N1I0 1966 aa15.1■□□□□ 0.01
PNKP-221ENST00000627317 CEP250Q9BV73 2442 aa15.09■□□□□ 0.01
PNKP-221ENST00000627317 PRRT4C9JH25 899 aa15.09■□□□□ 0.01
PNKP-221ENST00000627317 SGK1O00141 431 aa15.09■□□□□ 0.01
PNKP-221ENST00000627317 KLF8O95600 359 aaPredicted RBP15.09■□□□□ 0.01
PNKP-221ENST00000627317 FTCDO95954 541 aa15.09■□□□□ 0.01
PNKP-221ENST00000627317 CSKP41240 450 aa15.09■□□□□ 0.01
PNKP-221ENST00000627317 HCAR3P49019 387 aa15.09■□□□□ 0.01
PNKP-221ENST00000627317 SLC12A1Q13621 1099 aa15.09■□□□□ 0.01
PNKP-221ENST00000627317 SIM2Q14190 667 aaPredicted RBP15.09■□□□□ 0.01
PNKP-221ENST00000627317 DPYSL3Q14195 570 aa15.09■□□□□ 0.01
PNKP-221ENST00000627317 EIF4HQ15056 248 aaKnown RBP15.09■□□□□ 0.01
PNKP-221ENST00000627317 CRY1Q16526 586 aa15.09■□□□□ 0.01
PNKP-221ENST00000627317 FUT11Q495W5 492 aa15.09■□□□□ 0.01
PNKP-221ENST00000627317 RNF219Q5W0B1 726 aaPredicted RBP15.09■□□□□ 0.01
PNKP-221ENST00000627317 NLRP14Q86W24 1093 aa15.09■□□□□ 0.01
PNKP-221ENST00000627317 CCDC33Q8N5R6 958 aa15.09■□□□□ 0.01
PNKP-221ENST00000627317 UCMAQ8WVF2 138 aa15.09■□□□□ 0.01
PNKP-221ENST00000627317 CSPG4P5Q96PW8 444 aa15.09■□□□□ 0.01
PNKP-221ENST00000627317 ZNF670Q9BS34 389 aa15.09■□□□□ 0.01
PNKP-221ENST00000627317 ZDHHC4Q9NPG8 344 aa15.09■□□□□ 0.01
PNKP-221ENST00000627317 DNAI1Q9UI46 699 aa15.09■□□□□ 0.01
PNKP-221ENST00000627317 AMFRQ9UKV5 643 aa15.09■□□□□ 0.01
PNKP-221ENST00000627317 PYCARDQ9ULZ3 195 aa15.09■□□□□ 0.01
PNKP-221ENST00000627317 TBC1D30Q9Y2I9 924 aa15.09■□□□□ 0.01
PNKP-221ENST00000627317 ILVBLA1L0T0 632 aa15.08■□□□□ 0
PNKP-221ENST00000627317 AXIN1O15169 862 aa15.08■□□□□ 0
PNKP-221ENST00000627317 RAMP2O60895 175 aa15.08■□□□□ 0
PNKP-221ENST00000627317 RPP40O75818 363 aaKnown RBP15.08■□□□□ 0
PNKP-221ENST00000627317 CD48P09326 243 aa15.08■□□□□ 0
PNKP-221ENST00000627317 POLR2EP19388 210 aaKnown RBP15.08■□□□□ 0
PNKP-221ENST00000627317 MZF1P28698 734 aaPredicted RBP15.08■□□□□ 0
PNKP-221ENST00000627317 CTNNA1P35221 906 aaKnown RBP15.08■□□□□ 0
PNKP-221ENST00000627317 TIE1P35590 1138 aa15.08■□□□□ 0
PNKP-221ENST00000627317 ARSEP51690 589 aa15.08■□□□□ 0
PNKP-221ENST00000627317 DGKEP52429 567 aa15.08■□□□□ 0
PNKP-221ENST00000627317 MMRN1Q13201 1228 aa15.08■□□□□ 0
PNKP-221ENST00000627317 DPYSQ14117 519 aa15.08■□□□□ 0
PNKP-221ENST00000627317 LPAL2Q16609 132 aa15.08■□□□□ 0
PNKP-221ENST00000627317 PLEKHG6Q3KR16 790 aa15.08■□□□□ 0
PNKP-221ENST00000627317 PITRM1Q5JRX3 1037 aa15.08■□□□□ 0
PNKP-221ENST00000627317 MBLAC2Q68D91 279 aa15.08■□□□□ 0
PNKP-221ENST00000627317 ZNF783Q6ZMS7 281 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms