RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 MAGEC1O60732 1142 aa16.99■□□□□ 0.31
TRIM29-221ENST00000627238 IL1BP01584 269 aa16.99■□□□□ 0.31
TRIM29-221ENST00000627238 BMP6P22004 513 aa16.99■□□□□ 0.31
TRIM29-221ENST00000627238 STK19P49842 368 aaPredicted RBP16.99■□□□□ 0.31
TRIM29-221ENST00000627238 PPP2CBP62714 309 aa16.99■□□□□ 0.31
TRIM29-221ENST00000627238 PPP2CAP67775 309 aa16.99■□□□□ 0.31
TRIM29-221ENST00000627238 RABGAP1LQ5R372 815 aa16.99■□□□□ 0.31
TRIM29-221ENST00000627238 PRAMEF14Q5SWL7 426 aa16.99■□□□□ 0.31
TRIM29-221ENST00000627238 DSG4Q86SJ6 1040 aa16.99■□□□□ 0.31
TRIM29-221ENST00000627238 SPATS2Q86XZ4 545 aaKnown RBP16.99■□□□□ 0.31
TRIM29-221ENST00000627238 ZNF606Q8WXB4 792 aa16.99■□□□□ 0.31
TRIM29-221ENST00000627238 MAN1B1Q9UKM7 699 aa16.99■□□□□ 0.31
TRIM29-221ENST00000627238 CEP83Q9Y592 693 aa16.99■□□□□ 0.31
TRIM29-221ENST00000627238 TBC1D3DA0A087WVF3 549 aa16.98■□□□□ 0.31
TRIM29-221ENST00000627238 TBC1D3IA0A087WXS9 549 aa16.98■□□□□ 0.31
TRIM29-221ENST00000627238 TBC1D3EA0A087X179 549 aa16.98■□□□□ 0.31
TRIM29-221ENST00000627238 TBC1D3KA0A087X1G2 549 aa16.98■□□□□ 0.31
TRIM29-221ENST00000627238 GOLGA6L4A6NEF3 574 aa16.98■□□□□ 0.31
TRIM29-221ENST00000627238 TBC1D3FA6NER0 549 aaPredicted RBP16.98■□□□□ 0.31
TRIM29-221ENST00000627238 TBC1D3LB9A6J9 549 aa16.98■□□□□ 0.31
TRIM29-221ENST00000627238 CBX4O00257 560 aa16.98■□□□□ 0.31
TRIM29-221ENST00000627238 AFPP02771 609 aaKnown RBP16.98■□□□□ 0.31
TRIM29-221ENST00000627238 TBC1D3HP0C7X1 549 aa16.98■□□□□ 0.31
TRIM29-221ENST00000627238 JUPP14923 745 aa16.98■□□□□ 0.31
TRIM29-221ENST00000627238 ABCG1P45844 678 aa16.98■□□□□ 0.31
TRIM29-221ENST00000627238 PITX1P78337 314 aaPredicted RBP16.98■□□□□ 0.31
TRIM29-221ENST00000627238 DNAJC3Q13217 504 aa16.98■□□□□ 0.31
TRIM29-221ENST00000627238 PDCLQ13371 301 aa16.98■□□□□ 0.31
TRIM29-221ENST00000627238 C5orf22Q49AR2 442 aa16.98■□□□□ 0.31
TRIM29-221ENST00000627238 AGBL4Q5VU57 503 aa16.98■□□□□ 0.31
TRIM29-221ENST00000627238 FAM46CQ5VWP2 391 aa16.98■□□□□ 0.31
TRIM29-221ENST00000627238 TBC1D3GQ6DHY5 549 aa16.98■□□□□ 0.31
TRIM29-221ENST00000627238 TBC1D3CQ6IPX1 549 aa16.98■□□□□ 0.31
TRIM29-221ENST00000627238 PRPF39Q86UA1 669 aaKnown RBP16.98■□□□□ 0.31
TRIM29-221ENST00000627238 TBC1D3Q8IZP1 549 aaPredicted RBP16.98■□□□□ 0.31
TRIM29-221ENST00000627238 EID2Q8N6I1 236 aa16.98■□□□□ 0.31
TRIM29-221ENST00000627238 FAM81BQ96LP2 452 aa16.98■□□□□ 0.31
TRIM29-221ENST00000627238 INTS2Q9H0H0 1204 aaKnown RBP16.98■□□□□ 0.31
TRIM29-221ENST00000627238 PPM1HQ9ULR3 514 aa16.98■□□□□ 0.31
TRIM29-221ENST00000627238 OR51B4Q9Y5P0 310 aa16.98■□□□□ 0.31
TRIM29-221ENST00000627238 MYLKQ15746 1914 aa16.98■□□□□ 0.31
TRIM29-221ENST00000627238 ASXL3Q9C0F0 2248 aa16.97■□□□□ 0.31
TRIM29-221ENST00000627238 RNGTTO60942 597 aaKnown RBP16.97■□□□□ 0.31
TRIM29-221ENST00000627238 VAV1P15498 845 aa16.97■□□□□ 0.31
TRIM29-221ENST00000627238 PDGFRAP16234 1089 aa16.97■□□□□ 0.31
TRIM29-221ENST00000627238 CKMT2P17540 419 aa16.97■□□□□ 0.31
TRIM29-221ENST00000627238 ACP1P24666 158 aa16.97■□□□□ 0.31
TRIM29-221ENST00000627238 CCR1P32246 355 aa16.97■□□□□ 0.31
TRIM29-221ENST00000627238 EIF2S3P41091 472 aaKnown RBP16.97■□□□□ 0.31
TRIM29-221ENST00000627238 NUCB2P80303 420 aa16.97■□□□□ 0.31
TRIM29-221ENST00000627238 BNIP3Q12983 259 aa16.97■□□□□ 0.31
TRIM29-221ENST00000627238 CCDC157Q569K6 752 aa16.97■□□□□ 0.31
TRIM29-221ENST00000627238 HES3Q5TGS1 186 aa16.97■□□□□ 0.31
TRIM29-221ENST00000627238 FBXL22Q6P050 247 aa16.97■□□□□ 0.31
TRIM29-221ENST00000627238 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.97■□□□□ 0.31
TRIM29-221ENST00000627238 SNIP1Q8TAD8 396 aaKnown RBP16.97■□□□□ 0.31
TRIM29-221ENST00000627238 NELFBQ8WX92 580 aa16.97■□□□□ 0.31
TRIM29-221ENST00000627238 OR8D1Q8WZ84 308 aa16.97■□□□□ 0.31
TRIM29-221ENST00000627238 UBL7Q96S82 380 aaPredicted RBP16.97■□□□□ 0.31
TRIM29-221ENST00000627238 SARDHQ9UL12 918 aa16.97■□□□□ 0.31
TRIM29-221ENST00000627238 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.97■□□□□ 0.31
TRIM29-221ENST00000627238 PTPRQQ9UMZ3 2332 aa16.96■□□□□ 0.31
TRIM29-221ENST00000627238 TK2O00142 265 aa16.96■□□□□ 0.31
TRIM29-221ENST00000627238 MCF2LO15068 1137 aa16.96■□□□□ 0.31
TRIM29-221ENST00000627238 LETM1O95202 739 aaPredicted RBP16.96■□□□□ 0.31
TRIM29-221ENST00000627238 GNA15P30679 374 aa16.96■□□□□ 0.31
TRIM29-221ENST00000627238 METAP1P53582 386 aa16.96■□□□□ 0.31
TRIM29-221ENST00000627238 CDK17Q00537 523 aa16.96■□□□□ 0.31
TRIM29-221ENST00000627238 TARDBPQ13148 414 aaKnown RBP eCLIP16.96■□□□□ 0.31
TRIM29-221ENST00000627238 MORC3Q14149 939 aa16.96■□□□□ 0.31
TRIM29-221ENST00000627238 TAF5Q15542 800 aa16.96■□□□□ 0.31
TRIM29-221ENST00000627238 PROX2Q3B8N5 592 aa16.96■□□□□ 0.31
TRIM29-221ENST00000627238 FEM1AQ9BSK4 669 aa16.96■□□□□ 0.31
TRIM29-221ENST00000627238 PREBQ9HCU5 417 aa16.96■□□□□ 0.31
TRIM29-221ENST00000627238 UBE2TQ9NPD8 197 aaPredicted RBP16.96■□□□□ 0.31
TRIM29-221ENST00000627238 DDIT4Q9NX09 232 aa16.96■□□□□ 0.31
TRIM29-221ENST00000627238 HS3ST2Q9Y278 367 aa16.96■□□□□ 0.31
TRIM29-221ENST00000627238 TBC1D30Q9Y2I9 924 aa16.96■□□□□ 0.31
TRIM29-221ENST00000627238 CFAP46Q8IYW2 2715 aa16.96■□□□□ 0.3
TRIM29-221ENST00000627238 C1QTNF3-AMACRE9PGA6 284 aa16.95■□□□□ 0.3
TRIM29-221ENST00000627238 PRAMEF26H0Y7S4 382 aa16.95■□□□□ 0.3
TRIM29-221ENST00000627238 TLX3O43711 291 aaPredicted RBP16.95■□□□□ 0.3
TRIM29-221ENST00000627238 HSF2BPO75031 334 aa16.95■□□□□ 0.3
TRIM29-221ENST00000627238 RTN2O75298 545 aa16.95■□□□□ 0.3
TRIM29-221ENST00000627238 KRT5P13647 590 aa16.95■□□□□ 0.3
TRIM29-221ENST00000627238 SETMARQ53H47 684 aaPredicted RBP16.95■□□□□ 0.3
TRIM29-221ENST00000627238 EFHC1Q5JVL4 640 aa16.95■□□□□ 0.3
TRIM29-221ENST00000627238 NEK5Q6P3R8 708 aa16.95■□□□□ 0.3
TRIM29-221ENST00000627238 CIR1Q86X95 450 aaPredicted RBP16.95■□□□□ 0.3
TRIM29-221ENST00000627238 WDTC1Q8N5D0 677 aa16.95■□□□□ 0.3
TRIM29-221ENST00000627238 SH2D3CQ8N5H7 860 aa16.95■□□□□ 0.3
TRIM29-221ENST00000627238 DCBLD1Q8N8Z6 715 aa16.95■□□□□ 0.3
TRIM29-221ENST00000627238 TMEM145Q8NBT3 493 aa16.95■□□□□ 0.3
TRIM29-221ENST00000627238 LSM14AQ8ND56 463 aaKnown RBP16.95■□□□□ 0.3
TRIM29-221ENST00000627238 OR52K2Q8NGK3 314 aa16.95■□□□□ 0.3
TRIM29-221ENST00000627238 PRORYQ9H606 182 aa16.95■□□□□ 0.3
TRIM29-221ENST00000627238 FAM204AQ9H8W3 233 aa16.95■□□□□ 0.3
TRIM29-221ENST00000627238 SLC25A13Q9UJS0 675 aa16.95■□□□□ 0.3
TRIM29-221ENST00000627238 PCDHGC3Q9UN70 934 aa16.95■□□□□ 0.3
TRIM29-221ENST00000627238 DOCK9Q9BZ29 2069 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms