RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 LRRIQ3A6PVS8 624 aaPredicted RBP14.35□□□□□ -0.11
SNX1-214ENST00000625244 STK19P49842 368 aaPredicted RBP14.35□□□□□ -0.11
SNX1-214ENST00000625244 RIPPLY3P57055 190 aa14.35□□□□□ -0.11
SNX1-214ENST00000625244 TAS2R38P59533 333 aa14.35□□□□□ -0.11
SNX1-214ENST00000625244 HNRNPKP61978 463 aaKnown RBP eCLIP14.35□□□□□ -0.11
SNX1-214ENST00000625244 ECT2LQ008S8 904 aa14.35□□□□□ -0.11
SNX1-214ENST00000625244 INCA1Q0VD86 236 aa14.35□□□□□ -0.11
SNX1-214ENST00000625244 KCNAB2Q13303 367 aa14.35□□□□□ -0.11
SNX1-214ENST00000625244 NR0B2Q15466 257 aa14.35□□□□□ -0.11
SNX1-214ENST00000625244 SGSM1Q2NKQ1 1148 aa14.35□□□□□ -0.11
SNX1-214ENST00000625244 DEFB133Q30KQ1 61 aa14.35□□□□□ -0.11
SNX1-214ENST00000625244 RAB41Q5JT25 222 aa14.35□□□□□ -0.11
SNX1-214ENST00000625244 STXBP4Q6ZWJ1 553 aa14.35□□□□□ -0.11
SNX1-214ENST00000625244 RAB11FIP2Q7L804 512 aa14.35□□□□□ -0.11
SNX1-214ENST00000625244 ZNF557Q8N988 423 aaPredicted RBP14.35□□□□□ -0.11
SNX1-214ENST00000625244 PRICKLE1Q96MT3 831 aaPredicted RBP14.35□□□□□ -0.11
SNX1-214ENST00000625244 NT5C1AQ9BXI3 368 aa14.35□□□□□ -0.11
SNX1-214ENST00000625244 NCKIPSDQ9NZQ3 722 aa14.35□□□□□ -0.11
SNX1-214ENST00000625244 ANAPC2Q9UJX6 822 aa14.35□□□□□ -0.11
SNX1-214ENST00000625244 PRRC2CQ9Y520 2896 aaKnown RBP14.34□□□□□ -0.11
SNX1-214ENST00000625244 A0A1W2PQU0 124 aa14.34□□□□□ -0.11
SNX1-214ENST00000625244 POLE2P56282 527 aa14.34□□□□□ -0.11
SNX1-214ENST00000625244 RPS24P62847 133 aaKnown RBP14.34□□□□□ -0.11
SNX1-214ENST00000625244 SPIDRQ14159 915 aa14.34□□□□□ -0.11
SNX1-214ENST00000625244 GCNT7Q6ZNI0 430 aa14.34□□□□□ -0.11
SNX1-214ENST00000625244 Q6ZSR6 202 aa14.34□□□□□ -0.11
SNX1-214ENST00000625244 EPM2AIP1Q7L775 607 aaPredicted RBP14.34□□□□□ -0.11
SNX1-214ENST00000625244 PIGZQ86VD9 579 aa14.34□□□□□ -0.11
SNX1-214ENST00000625244 ZFAND4Q86XD8 727 aa14.34□□□□□ -0.11
SNX1-214ENST00000625244 CCDC65Q8IXS2 484 aa14.34□□□□□ -0.11
SNX1-214ENST00000625244 CARNMT1Q8N4J0 409 aa14.34□□□□□ -0.11
SNX1-214ENST00000625244 ZNF507Q8TCN5 953 aa14.34□□□□□ -0.11
SNX1-214ENST00000625244 EDEM1Q92611 657 aa14.34□□□□□ -0.11
SNX1-214ENST00000625244 SYNDIG1Q9H7V2 258 aa14.34□□□□□ -0.11
SNX1-214ENST00000625244 EPB41L5Q9HCM4 733 aa14.34□□□□□ -0.11
SNX1-214ENST00000625244 SEPT10Q9P0V9 454 aa14.34□□□□□ -0.11
SNX1-214ENST00000625244 KLF15Q9UIH9 416 aa14.34□□□□□ -0.11
SNX1-214ENST00000625244 SALL4Q9UJQ4 1053 aa14.34□□□□□ -0.11
SNX1-214ENST00000625244 CEP83Q9Y592 693 aa14.34□□□□□ -0.11
SNX1-214ENST00000625244 CELSR1Q9NYQ6 3014 aa14.33□□□□□ -0.12
SNX1-214ENST00000625244 NTN3O00634 580 aaPredicted RBP14.33□□□□□ -0.12
SNX1-214ENST00000625244 NVLO15381 856 aaKnown RBP14.33□□□□□ -0.12
SNX1-214ENST00000625244 BMP15O95972 392 aa14.33□□□□□ -0.12
SNX1-214ENST00000625244 ZBED1O96006 694 aa14.33□□□□□ -0.12
SNX1-214ENST00000625244 TRIM21P19474 475 aaKnown RBP14.33□□□□□ -0.12
SNX1-214ENST00000625244 NUMBP49757 651 aa14.33□□□□□ -0.12
SNX1-214ENST00000625244 TKTL1P51854 596 aa14.33□□□□□ -0.12
SNX1-214ENST00000625244 AP3M2P53677 418 aa14.33□□□□□ -0.12
SNX1-214ENST00000625244 CLDN10P78369 228 aa14.33□□□□□ -0.12
SNX1-214ENST00000625244 C1QBPQ07021 282 aaKnown RBP14.33□□□□□ -0.12
SNX1-214ENST00000625244 FZD2Q14332 565 aa14.33□□□□□ -0.12
SNX1-214ENST00000625244 ZNF284Q2VY69 593 aa14.33□□□□□ -0.12
SNX1-214ENST00000625244 RNF219Q5W0B1 726 aaPredicted RBP14.33□□□□□ -0.12
SNX1-214ENST00000625244 PM20D1Q6GTS8 502 aa14.33□□□□□ -0.12
SNX1-214ENST00000625244 NADSYN1Q6IA69 706 aa14.33□□□□□ -0.12
SNX1-214ENST00000625244 OR6B2Q6IFH4 312 aa14.33□□□□□ -0.12
SNX1-214ENST00000625244 BORAQ6PGQ7 559 aa14.33□□□□□ -0.12
SNX1-214ENST00000625244 ABI3BPQ7Z7G0 1075 aa14.33□□□□□ -0.12
SNX1-214ENST00000625244 DSG4Q86SJ6 1040 aa14.33□□□□□ -0.12
SNX1-214ENST00000625244 NELFCDQ8IXH7 590 aa14.33□□□□□ -0.12
SNX1-214ENST00000625244 APCDD1Q8J025 514 aa14.33□□□□□ -0.12
SNX1-214ENST00000625244 PARD3BQ8TEW8 1205 aa14.33□□□□□ -0.12
SNX1-214ENST00000625244 MIB2Q96AX9 1013 aa14.33□□□□□ -0.12
SNX1-214ENST00000625244 SPAG5Q96R06 1193 aa14.33□□□□□ -0.12
SNX1-214ENST00000625244 CCDC3Q9BQI4 270 aa14.33□□□□□ -0.12
SNX1-214ENST00000625244 PANK2Q9BZ23 570 aa14.33□□□□□ -0.12
SNX1-214ENST00000625244 ULBP1Q9BZM6 244 aa14.33□□□□□ -0.12
SNX1-214ENST00000625244 FOXP3Q9BZS1 431 aa14.33□□□□□ -0.12
SNX1-214ENST00000625244 PREBQ9HCU5 417 aa14.33□□□□□ -0.12
SNX1-214ENST00000625244 OLA1Q9NTK5 396 aaKnown RBP14.33□□□□□ -0.12
SNX1-214ENST00000625244 CSNK1G3Q9Y6M4 447 aa14.33□□□□□ -0.12
SNX1-214ENST00000625244 A0A087X0B3 334 aa14.32□□□□□ -0.12
SNX1-214ENST00000625244 EIF3DO15371 548 aaKnown RBP eCLIP14.32□□□□□ -0.12
SNX1-214ENST00000625244 IRAK2O43187 625 aa14.32□□□□□ -0.12
SNX1-214ENST00000625244 ASS1P00966 412 aaKnown RBP14.32□□□□□ -0.12
SNX1-214ENST00000625244 CSF2P04141 144 aa14.32□□□□□ -0.12
SNX1-214ENST00000625244 NME1P15531 152 aaKnown RBP14.32□□□□□ -0.12
SNX1-214ENST00000625244 HNRNPA2B1P22626 353 aaKnown RBP14.32□□□□□ -0.12
SNX1-214ENST00000625244 AKT2P31751 481 aa14.32□□□□□ -0.12
SNX1-214ENST00000625244 DLG4P78352 724 aa14.32□□□□□ -0.12
SNX1-214ENST00000625244 EIF3IQ13347 325 aaKnown RBP14.32□□□□□ -0.12
SNX1-214ENST00000625244 CDH18Q13634 790 aa14.32□□□□□ -0.12
SNX1-214ENST00000625244 SLC35F3Q8IY50 421 aa14.32□□□□□ -0.12
SNX1-214ENST00000625244 HJURPQ8NCD3 748 aaPredicted RBP14.32□□□□□ -0.12
SNX1-214ENST00000625244 WDR48Q8TAF3 677 aa14.32□□□□□ -0.12
SNX1-214ENST00000625244 RNF139Q8WU17 664 aa14.32□□□□□ -0.12
SNX1-214ENST00000625244 FRS2Q8WU20 508 aa14.32□□□□□ -0.12
SNX1-214ENST00000625244 BOCQ9BWV1 1114 aa14.32□□□□□ -0.12
SNX1-214ENST00000625244 IRX2Q9BZI1 471 aaPredicted RBP14.32□□□□□ -0.12
SNX1-214ENST00000625244 UBXN6Q9BZV1 441 aa14.32□□□□□ -0.12
SNX1-214ENST00000625244 ZNF71Q9NQZ8 489 aaPredicted RBP14.32□□□□□ -0.12
SNX1-214ENST00000625244 PISDQ9UG56 409 aa14.32□□□□□ -0.12
SNX1-214ENST00000625244 PPM1HQ9ULR3 514 aa14.32□□□□□ -0.12
SNX1-214ENST00000625244 ADGRG4Q8IZF6 3080 aa14.32□□□□□ -0.12
SNX1-214ENST00000625244 NYNRINQ9P2P1 1898 aaKnown RBP14.31□□□□□ -0.12
SNX1-214ENST00000625244 AKAP9Q99996 3911 aa14.31□□□□□ -0.12
SNX1-214ENST00000625244 NF1P21359 2839 aa14.31□□□□□ -0.12
SNX1-214ENST00000625244 LRRK1Q38SD2 2015 aa14.31□□□□□ -0.12
SNX1-214ENST00000625244 PRAMEF33A0A0G2JMD5 474 aa14.31□□□□□ -0.12
SNX1-214ENST00000625244 H3BQV1 296 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms