RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 OVGP1Q12889 678 aa20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 CTXN3Q4LDR2 81 aa20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 STXBP5Q5T5C0 1151 aa20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 ARHGAP36Q6ZRI8 547 aa20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 ARHGAP18Q8N392 663 aa20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 ZNF669Q96BR6 464 aaPredicted RBP20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 SIRPGQ9P1W8 387 aa20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 TLR6Q9Y2C9 796 aa20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 HS3ST4Q9Y661 456 aa20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 ZCWPW2A0A1B0GU75 182 aa20.13■□□□□ 0.81
PCDHB11-202ENST00000624887 FAM237BA0A1B0GVD1 139 aa20.13■□□□□ 0.81
PCDHB11-202ENST00000624887 E9PAM4 449 aa20.13■□□□□ 0.81
PCDHB11-202ENST00000624887 ENPP3O14638 875 aa20.13■□□□□ 0.81
PCDHB11-202ENST00000624887 MAFKO60675 156 aa20.13■□□□□ 0.81
PCDHB11-202ENST00000624887 NBNO60934 754 aa20.13■□□□□ 0.81
PCDHB11-202ENST00000624887 ITGA2BP08514 1039 aa20.13■□□□□ 0.81
PCDHB11-202ENST00000624887 GP5P40197 560 aa20.13■□□□□ 0.81
PCDHB11-202ENST00000624887 TUBP50607 506 aa20.13■□□□□ 0.81
PCDHB11-202ENST00000624887 ANKRD20A4Q4UJ75 823 aa20.13■□□□□ 0.81
PCDHB11-202ENST00000624887 NAPEPLDQ6IQ20 393 aa20.13■□□□□ 0.81
PCDHB11-202ENST00000624887 NLRP9Q7RTR0 991 aa20.13■□□□□ 0.81
PCDHB11-202ENST00000624887 ABI1Q8IZP0 508 aa20.13■□□□□ 0.81
PCDHB11-202ENST00000624887 STKLD1Q8NE28 680 aa20.13■□□□□ 0.81
PCDHB11-202ENST00000624887 RFWD2Q8NHY2 731 aa20.13■□□□□ 0.81
PCDHB11-202ENST00000624887 SLC39A13Q96H72 371 aa20.13■□□□□ 0.81
PCDHB11-202ENST00000624887 C1orf74Q96LT6 269 aa20.13■□□□□ 0.81
PCDHB11-202ENST00000624887 CPNE1Q99829 537 aa20.13■□□□□ 0.81
PCDHB11-202ENST00000624887 MECRQ9BV79 373 aa20.13■□□□□ 0.81
PCDHB11-202ENST00000624887 SLC39A8Q9C0K1 460 aa20.13■□□□□ 0.81
PCDHB11-202ENST00000624887 IL22Q9GZX6 179 aa20.13■□□□□ 0.81
PCDHB11-202ENST00000624887 IL37Q9NZH6 218 aa20.13■□□□□ 0.81
PCDHB11-202ENST00000624887 TXNDC16Q9P2K2 825 aa20.13■□□□□ 0.81
PCDHB11-202ENST00000624887 OR6C75A6NL08 312 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 UNC5CO95185 931 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 MLLT6P55198 1093 aaPredicted RBP20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 GPNMBQ14956 572 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 SPDYAQ5MJ70 313 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 CERCAMQ5T4B2 595 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 GRTP1Q5TC63 336 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 FAM171A1Q5VUB5 890 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 AFMIDQ63HM1 303 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 KYAT3Q6YP21 454 aaKnown RBP20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 ASRGL1Q7L266 308 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 LINC00523Q86TU6 105 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 DBF4BQ8NFT6 615 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 RAB3IL1Q8TBN0 382 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 PGLYRP2Q96PD5 576 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 IL12RB2Q99665 862 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 GEMIN8Q9NWZ8 242 aaKnown RBP20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 IL1RAPL1Q9NZN1 696 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 AAR2Q9Y312 384 aaKnown RBP20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 PCDHB7Q9Y5E2 793 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 WASH4PA8MWX3 477 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 TPP1O14773 563 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 MATN3O15232 486 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 BIRC5O15392 142 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 MOCS2O96007 188 aaPredicted RBP20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 SLC2A3P11169 496 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 DNAJB2P25686 324 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 CDK7P50613 346 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 USP46P62068 366 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 ELF3P78545 371 aaPredicted RBP20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 CDH17Q12864 832 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 ATG16L1Q676U5 607 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 ZNF280DQ6N043 979 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 OTOP3Q7RTS5 596 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 TBC1D1Q86TI0 1168 aaPredicted RBP20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 CEP57Q86XR8 500 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 RTL3Q8N8U3 475 aaKnown RBP20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 USP33Q8TEY7 942 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 KLHL29Q96CT2 875 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 CASD1Q96PB1 797 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 GPR62Q9BZJ7 368 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 TXLNGQ9NUQ3 528 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 NDFIP2Q9NV92 336 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 UBP1Q9NZI7 540 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 DCTN4Q9UJW0 460 aa20.12■□□□□ 0.81
PCDHB11-202ENST00000624887 FAM92AA1XBS5 289 aa20.11■□□□□ 0.81
PCDHB11-202ENST00000624887 ATP5HO75947 161 aa20.11■□□□□ 0.81
PCDHB11-202ENST00000624887 BPGMP07738 259 aa20.11■□□□□ 0.81
PCDHB11-202ENST00000624887 NQO1P15559 274 aaKnown RBP20.11■□□□□ 0.81
PCDHB11-202ENST00000624887 BFSP2Q13515 415 aa20.11■□□□□ 0.81
PCDHB11-202ENST00000624887 PDE1CQ14123 709 aaPredicted RBP20.11■□□□□ 0.81
PCDHB11-202ENST00000624887 C14orf80Q86SX3 495 aa20.11■□□□□ 0.81
PCDHB11-202ENST00000624887 LRRC49Q8IUZ0 686 aa20.11■□□□□ 0.81
PCDHB11-202ENST00000624887 NUDCD3Q8IVD9 361 aa20.11■□□□□ 0.81
PCDHB11-202ENST00000624887 ATAD1Q8NBU5 361 aa20.11■□□□□ 0.81
PCDHB11-202ENST00000624887 E2F7Q96AV8 911 aa20.11■□□□□ 0.81
PCDHB11-202ENST00000624887 FCRL5Q96RD9 977 aa20.11■□□□□ 0.81
PCDHB11-202ENST00000624887 APOL2Q9BQE5 337 aa20.11■□□□□ 0.81
PCDHB11-202ENST00000624887 SEZ6LQ9BYH1 1024 aa20.11■□□□□ 0.81
PCDHB11-202ENST00000624887 UNC93B1Q9H1C4 597 aa20.11■□□□□ 0.81
PCDHB11-202ENST00000624887 ARHGEF3Q9NR81 526 aa20.11■□□□□ 0.81
PCDHB11-202ENST00000624887 GMIPQ9P107 970 aa20.11■□□□□ 0.81
PCDHB11-202ENST00000624887 FNIP2Q9P278 1114 aa20.11■□□□□ 0.81
PCDHB11-202ENST00000624887 SOX13Q9UN79 622 aa20.11■□□□□ 0.81
PCDHB11-202ENST00000624887 ATP9BO43861 1147 aa20.1■□□□□ 0.81
PCDHB11-202ENST00000624887 MGRN1O60291 552 aa20.1■□□□□ 0.81
PCDHB11-202ENST00000624887 GLRA3O75311 464 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms