RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 PPP1R16BQ96T49 567 aa15.48■□□□□ 0.07
PMS1-221ENST00000624204 ADPGKQ9BRR6 497 aa15.48■□□□□ 0.07
PMS1-221ENST00000624204 EIF2AQ9BY44 585 aaKnown RBP15.48■□□□□ 0.07
PMS1-221ENST00000624204 MAGEB5Q9BZ81 275 aa15.48■□□□□ 0.07
PMS1-221ENST00000624204 TMEM98Q9Y2Y6 226 aa15.48■□□□□ 0.07
PMS1-221ENST00000624204 APOL1O14791 398 aa15.48■□□□□ 0.07
PMS1-221ENST00000624204 NDUFB5O43674 189 aa15.48■□□□□ 0.07
PMS1-221ENST00000624204 LYPLA2O95372 231 aa15.48■□□□□ 0.07
PMS1-221ENST00000624204 HDCP19113 662 aa15.48■□□□□ 0.07
PMS1-221ENST00000624204 ZNF132P52740 706 aa15.48■□□□□ 0.07
PMS1-221ENST00000624204 DLG2Q15700 870 aa15.48■□□□□ 0.07
PMS1-221ENST00000624204 FAM47CQ5HY64 1035 aa15.48■□□□□ 0.07
PMS1-221ENST00000624204 GALNT18Q6P9A2 607 aa15.48■□□□□ 0.07
PMS1-221ENST00000624204 CCNYL1Q8N7R7 359 aa15.48■□□□□ 0.07
PMS1-221ENST00000624204 CHURC1Q8WUH1 139 aa15.48■□□□□ 0.07
PMS1-221ENST00000624204 RNF157Q96PX1 679 aa15.48■□□□□ 0.07
PMS1-221ENST00000624204 APBA2Q99767 749 aa15.48■□□□□ 0.07
PMS1-221ENST00000624204 ZNF518BQ9C0D4 1074 aa15.48■□□□□ 0.07
PMS1-221ENST00000624204 CCDC68Q9H2F9 335 aa15.48■□□□□ 0.07
PMS1-221ENST00000624204 ANKEF1Q9NU02 776 aa15.48■□□□□ 0.07
PMS1-221ENST00000624204 FBXO40Q9UH90 709 aa15.48■□□□□ 0.07
PMS1-221ENST00000624204 CNTN6Q9UQ52 1028 aa15.48■□□□□ 0.07
PMS1-221ENST00000624204 TRIM38O00635 465 aa15.47■□□□□ 0.07
PMS1-221ENST00000624204 CNOT3O75175 753 aaKnown RBP15.47■□□□□ 0.07
PMS1-221ENST00000624204 USP12O75317 370 aa15.47■□□□□ 0.07
PMS1-221ENST00000624204 RGS7P49802 495 aa15.47■□□□□ 0.07
PMS1-221ENST00000624204 ZNF534Q76KX8 674 aa15.47■□□□□ 0.07
PMS1-221ENST00000624204 SIX6OS1Q8N1H7 587 aa15.47■□□□□ 0.07
PMS1-221ENST00000624204 TAMM41Q96BW9 452 aa15.47■□□□□ 0.07
PMS1-221ENST00000624204 CGRRF1Q99675 332 aa15.47■□□□□ 0.07
PMS1-221ENST00000624204 HAPLN2Q9GZV7 340 aa15.47■□□□□ 0.07
PMS1-221ENST00000624204 COA1Q9GZY4 146 aa15.47■□□□□ 0.07
PMS1-221ENST00000624204 SOX17Q9H6I2 414 aaPredicted RBP15.47■□□□□ 0.07
PMS1-221ENST00000624204 EPS8L2Q9H6S3 715 aa15.47■□□□□ 0.07
PMS1-221ENST00000624204 SNX15Q9NRS6 342 aa15.47■□□□□ 0.07
PMS1-221ENST00000624204 CNTNAP4Q9C0A0 1308 aa15.47■□□□□ 0.07
PMS1-221ENST00000624204 ZNF839A8K0R7 811 aa15.47■□□□□ 0.07
PMS1-221ENST00000624204 SOCS2O14508 198 aa15.47■□□□□ 0.07
PMS1-221ENST00000624204 ERBB2P04626 1255 aa15.47■□□□□ 0.07
PMS1-221ENST00000624204 GNL1P36915 607 aaPredicted RBP15.47■□□□□ 0.07
PMS1-221ENST00000624204 YWHAEP62258 255 aaKnown RBP15.47■□□□□ 0.07
PMS1-221ENST00000624204 RC3H1Q5TC82 1133 aaKnown RBP15.47■□□□□ 0.07
PMS1-221ENST00000624204 THOC7Q6I9Y2 204 aaKnown RBP15.47■□□□□ 0.07
PMS1-221ENST00000624204 LRRC8EQ6NSJ5 796 aa15.47■□□□□ 0.07
PMS1-221ENST00000624204 GK5Q6ZS86 529 aa15.47■□□□□ 0.07
PMS1-221ENST00000624204 OFCC1Q8IZS5 231 aa15.47■□□□□ 0.07
PMS1-221ENST00000624204 LPGAT1Q92604 370 aa15.47■□□□□ 0.07
PMS1-221ENST00000624204 NTPCRQ9BSD7 190 aaKnown RBP15.47■□□□□ 0.07
PMS1-221ENST00000624204 GATA5Q9BWX5 397 aaPredicted RBP15.47■□□□□ 0.07
PMS1-221ENST00000624204 PCDH12Q9NPG4 1184 aa15.47■□□□□ 0.07
PMS1-221ENST00000624204 SACM1LQ9NTJ5 587 aa15.47■□□□□ 0.07
PMS1-221ENST00000624204 ASNSD1Q9NWL6 643 aa15.47■□□□□ 0.07
PMS1-221ENST00000624204 MOCS1Q9NZB8 636 aa15.47■□□□□ 0.07
PMS1-221ENST00000624204 DAPK2Q9UIK4 370 aa15.47■□□□□ 0.07
PMS1-221ENST00000624204 CNOT11Q9UKZ1 510 aaKnown RBP15.47■□□□□ 0.07
PMS1-221ENST00000624204 FOCADQ5VW36 1801 aa15.47■□□□□ 0.07
PMS1-221ENST00000624204 RNF103-CHMP3A0A140T963 221 aa15.46■□□□□ 0.07
PMS1-221ENST00000624204 KCNU1A8MYU2 1149 aa15.46■□□□□ 0.07
PMS1-221ENST00000624204 HDAC3O15379 428 aa15.46■□□□□ 0.07
PMS1-221ENST00000624204 TRIM13O60858 407 aa15.46■□□□□ 0.07
PMS1-221ENST00000624204 BAIAP3O94812 1187 aa15.46■□□□□ 0.07
PMS1-221ENST00000624204 ESRRBO95718 433 aa15.46■□□□□ 0.07
PMS1-221ENST00000624204 MT-ND1P03886 318 aa15.46■□□□□ 0.07
PMS1-221ENST00000624204 RAB15P59190 212 aa15.46■□□□□ 0.07
PMS1-221ENST00000624204 STXBP5Q5T5C0 1151 aa15.46■□□□□ 0.07
PMS1-221ENST00000624204 HHIPL2Q6UWX4 724 aa15.46■□□□□ 0.07
PMS1-221ENST00000624204 SCYL1Q96KG9 808 aa15.46■□□□□ 0.07
PMS1-221ENST00000624204 SFMBT1Q9UHJ3 866 aa15.46■□□□□ 0.07
PMS1-221ENST00000624204 CTDP1Q9Y5B0 961 aaPredicted RBP15.46■□□□□ 0.07
PMS1-221ENST00000624204 ZBBXA8MT70 800 aa15.46■□□□□ 0.07
PMS1-221ENST00000624204 C9JVG2 144 aa15.46■□□□□ 0.07
PMS1-221ENST00000624204 K7ERI5 159 aa15.46■□□□□ 0.07
PMS1-221ENST00000624204 PIGNO95427 931 aa15.46■□□□□ 0.07
PMS1-221ENST00000624204 MGAT1P26572 445 aa15.46■□□□□ 0.07
PMS1-221ENST00000624204 EPHX2P34913 555 aa15.46■□□□□ 0.07
PMS1-221ENST00000624204 AVPR1AP37288 418 aa15.46■□□□□ 0.07
PMS1-221ENST00000624204 PSME3P61289 254 aa15.46■□□□□ 0.07
PMS1-221ENST00000624204 CLDN10P78369 228 aa15.46■□□□□ 0.07
PMS1-221ENST00000624204 IRF9Q00978 393 aa15.46■□□□□ 0.07
PMS1-221ENST00000624204 RAB39AQ14964 217 aa15.46■□□□□ 0.07
PMS1-221ENST00000624204 RSBN1LQ6PCB5 846 aaPredicted RBP15.46■□□□□ 0.07
PMS1-221ENST00000624204 PRR23BQ6ZRT6 265 aa15.46■□□□□ 0.07
PMS1-221ENST00000624204 ZC3H7AQ8IWR0 971 aaKnown RBP15.46■□□□□ 0.07
PMS1-221ENST00000624204 CXorf38Q8TB03 319 aa15.46■□□□□ 0.07
PMS1-221ENST00000624204 CHPT1Q8WUD6 406 aa15.46■□□□□ 0.07
PMS1-221ENST00000624204 EFHD1Q9BUP0 239 aa15.46■□□□□ 0.07
PMS1-221ENST00000624204 HES2Q9Y543 173 aa15.46■□□□□ 0.07
PMS1-221ENST00000624204 KPNA7A9QM74 516 aa15.46■□□□□ 0.06
PMS1-221ENST00000624204 KCNH1O95259 989 aa15.46■□□□□ 0.06
PMS1-221ENST00000624204 JUNP05412 331 aaKnown RBP15.46■□□□□ 0.06
PMS1-221ENST00000624204 PDGFRAP16234 1089 aa15.46■□□□□ 0.06
PMS1-221ENST00000624204 PCYT1AP49585 367 aa15.46■□□□□ 0.06
PMS1-221ENST00000624204 TRIM25Q14258 630 aaKnown RBP15.46■□□□□ 0.06
PMS1-221ENST00000624204 CHSY3Q70JA7 882 aa15.46■□□□□ 0.06
PMS1-221ENST00000624204 WNK4Q96J92 1243 aa15.46■□□□□ 0.06
PMS1-221ENST00000624204 RPL10LQ96L21 214 aaKnown RBP15.46■□□□□ 0.06
PMS1-221ENST00000624204 SNX27Q96L92 541 aa15.46■□□□□ 0.06
PMS1-221ENST00000624204 MTG1Q9BT17 334 aaPredicted RBP15.46■□□□□ 0.06
PMS1-221ENST00000624204 ANKRD60Q9BZ19 345 aa15.46■□□□□ 0.06
PMS1-221ENST00000624204 NIF3L1Q9GZT8 377 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms