RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 ADAMTS1Q9UHI8 967 aa12.79□□□□□ -0.36
LINC00963-217ENST00000624009 SLC25A13Q9UJS0 675 aa12.79□□□□□ -0.36
LINC00963-217ENST00000624009 FZD4Q9ULV1 537 aa12.79□□□□□ -0.36
LINC00963-217ENST00000624009 HS3ST2Q9Y278 367 aa12.79□□□□□ -0.36
LINC00963-217ENST00000624009 METTL12A8MUP2 240 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 EIF3CLB5ME19 914 aaKnown RBP12.78□□□□□ -0.36
LINC00963-217ENST00000624009 TM4SF5O14894 197 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 ADH1BP00325 375 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 TNFAIP3P21580 790 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 GPD1P21695 349 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 ITPKAP23677 461 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 MZF1P28698 734 aaPredicted RBP12.78□□□□□ -0.36
LINC00963-217ENST00000624009 HTR7P34969 479 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 MAPKAPK2P49137 400 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 HDAC4P56524 1084 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 UBASH3AP57075 661 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 ATP11AP98196 1134 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 SLC20A2Q08357 652 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 ASIC2Q16515 512 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 TRIM61Q5EBN2 209 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 STPG1Q5TH74 334 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 DNAJC24Q6P3W2 148 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 WDR59Q6PJI9 974 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 LRSAM1Q6UWE0 723 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 DSG4Q86SJ6 1040 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 C14orf80Q86SX3 495 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 FAM131BQ86XD5 332 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 EMC1Q8N766 993 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 FNIP1Q8TF40 1166 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 FRS2Q8WU20 508 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 FAM131CQ96AQ9 280 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 TRIM11Q96F44 468 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 HSPA12BQ96MM6 686 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 EIF3CQ99613 913 aaKnown RBP12.78□□□□□ -0.36
LINC00963-217ENST00000624009 CNPY3Q9BT09 278 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 EDEM2Q9BV94 578 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 ZDHHC5Q9C0B5 715 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 ZYG11BQ9C0D3 744 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 SLC6A17Q9H1V8 727 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 PABPC3Q9H361 631 aaKnown RBP12.78□□□□□ -0.36
LINC00963-217ENST00000624009 OSGEPQ9NPF4 335 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 TMEM74BQ9NUR3 256 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 SEPT11Q9NVA2 429 aaKnown RBP12.78□□□□□ -0.36
LINC00963-217ENST00000624009 PARVAQ9NVD7 372 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 OR12D3Q9UGF7 316 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 VPS28Q9UK41 221 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 SLC6A14Q9UN76 642 aa12.78□□□□□ -0.36
LINC00963-217ENST00000624009 TTC34A8MYJ7 566 aa12.77□□□□□ -0.37
LINC00963-217ENST00000624009 UPK3BL1B0FP48 263 aa12.77□□□□□ -0.37
LINC00963-217ENST00000624009 UPK3BL2E5RIL1 263 aa12.77□□□□□ -0.37
LINC00963-217ENST00000624009 GDF9O60383 454 aa12.77□□□□□ -0.37
LINC00963-217ENST00000624009 SIN3BO75182 1162 aa12.77□□□□□ -0.37
LINC00963-217ENST00000624009 CNTN5O94779 1100 aa12.77□□□□□ -0.37
LINC00963-217ENST00000624009 RHOCP08134 193 aa12.77□□□□□ -0.37
LINC00963-217ENST00000624009 MYBL1P10243 752 aa12.77□□□□□ -0.37
LINC00963-217ENST00000624009 C5AR1P21730 350 aa12.77□□□□□ -0.37
LINC00963-217ENST00000624009 OR1E1P30953 314 aa12.77□□□□□ -0.37
LINC00963-217ENST00000624009 CTSOP43234 321 aaPredicted RBP12.77□□□□□ -0.37
LINC00963-217ENST00000624009 KLHL30Q0D2K2 578 aa12.77□□□□□ -0.37
LINC00963-217ENST00000624009 ALFQ53S48 1182 aa12.77□□□□□ -0.37
LINC00963-217ENST00000624009 DAB2IPQ5VWQ8 1189 aa12.77□□□□□ -0.37
LINC00963-217ENST00000624009 IL31Q6EBC2 164 aa12.77□□□□□ -0.37
LINC00963-217ENST00000624009 PLEKHA7Q6IQ23 1121 aa12.77□□□□□ -0.37
LINC00963-217ENST00000624009 CIR1Q86X95 450 aaPredicted RBP12.77□□□□□ -0.37
LINC00963-217ENST00000624009 SH2D3CQ8N5H7 860 aa12.77□□□□□ -0.37
LINC00963-217ENST00000624009 JOSD2Q8TAC2 188 aa12.77□□□□□ -0.37
LINC00963-217ENST00000624009 FAM172AQ8WUF8 416 aa12.77□□□□□ -0.37
LINC00963-217ENST00000624009 PTPRN2Q92932 1015 aa12.77□□□□□ -0.37
LINC00963-217ENST00000624009 NCAPGQ9BPX3 1015 aa12.77□□□□□ -0.37
LINC00963-217ENST00000624009 BTBD1Q9H0C5 482 aa12.77□□□□□ -0.37
LINC00963-217ENST00000624009 MUC3BQ9H195 1237 aa12.77□□□□□ -0.37
LINC00963-217ENST00000624009 HAUS4Q9H6D7 363 aa12.77□□□□□ -0.37
LINC00963-217ENST00000624009 TMEM9BQ9NQ34 198 aa12.77□□□□□ -0.37
LINC00963-217ENST00000624009 DONSONQ9NYP3 566 aa12.77□□□□□ -0.37
LINC00963-217ENST00000624009 SLCO3A1Q9UIG8 710 aa12.77□□□□□ -0.37
LINC00963-217ENST00000624009 NCKAP1Q9Y2A7 1128 aa12.77□□□□□ -0.37
LINC00963-217ENST00000624009 TP53BP1Q12888 1972 aaPredicted RBP12.77□□□□□ -0.37
LINC00963-217ENST00000624009 ARID1BQ8NFD5 2236 aaPredicted RBP12.77□□□□□ -0.37
LINC00963-217ENST00000624009 A0A1B0GTW7 788 aa12.76□□□□□ -0.37
LINC00963-217ENST00000624009 C10orf142B7Z368 130 aa12.76□□□□□ -0.37
LINC00963-217ENST00000624009 MCF2LO15068 1137 aa12.76□□□□□ -0.37
LINC00963-217ENST00000624009 SLC7A4O43246 635 aa12.76□□□□□ -0.37
LINC00963-217ENST00000624009 SYPP08247 313 aa12.76□□□□□ -0.37
LINC00963-217ENST00000624009 RHOQP17081 205 aa12.76□□□□□ -0.37
LINC00963-217ENST00000624009 L1CAMP32004 1257 aa12.76□□□□□ -0.37
LINC00963-217ENST00000624009 IRAK1P51617 712 aa12.76□□□□□ -0.37
LINC00963-217ENST00000624009 IRX4P78413 519 aa12.76□□□□□ -0.37
LINC00963-217ENST00000624009 ZBED6P86452 979 aa12.76□□□□□ -0.37
LINC00963-217ENST00000624009 GFPT1Q06210 699 aaPredicted RBP12.76□□□□□ -0.37
LINC00963-217ENST00000624009 MAMLD1Q13495 774 aa12.76□□□□□ -0.37
LINC00963-217ENST00000624009 CST6Q15828 149 aa12.76□□□□□ -0.37
LINC00963-217ENST00000624009 CCDC6Q16204 474 aa12.76□□□□□ -0.37
LINC00963-217ENST00000624009 C15orf59Q2T9L4 293 aaPredicted RBP12.76□□□□□ -0.37
LINC00963-217ENST00000624009 FAM46CQ5VWP2 391 aa12.76□□□□□ -0.37
LINC00963-217ENST00000624009 TCEAL6Q6IPX3 200 aa12.76□□□□□ -0.37
LINC00963-217ENST00000624009 RETSATQ6NUM9 610 aa12.76□□□□□ -0.37
LINC00963-217ENST00000624009 DCUN1D2Q6PH85 259 aa12.76□□□□□ -0.37
LINC00963-217ENST00000624009 ZNF571Q7Z3V5 609 aaPredicted RBP12.76□□□□□ -0.37
LINC00963-217ENST00000624009 SLFN11Q7Z7L1 901 aa12.76□□□□□ -0.37
LINC00963-217ENST00000624009 VPS36Q86VN1 386 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms