RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 ART5Q96L15 291 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 CDHR2Q9BYE9 1310 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 FSBPO95073 299 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 TKTP29401 623 aaKnown RBP6.4□□□□□ -1.39
CDKL5-205ENST00000623535 COPAP53621 1224 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 TSNQ15631 228 aaKnown RBP6.4□□□□□ -1.39
CDKL5-205ENST00000623535 PAQR7Q86WK9 346 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 EFHD2Q96C19 240 aaPredicted RBP6.4□□□□□ -1.39
CDKL5-205ENST00000623535 DPEP2Q9H4A9 486 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 SMPD4Q9NXE4 827 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 BTBD3Q9Y2F9 522 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 CDY2AQ9Y6F7 541 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 CDY1Q9Y6F8 540 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 URB1O60287 2271 aaKnown RBP6.4□□□□□ -1.39
CDKL5-205ENST00000623535 ATP7BP35670 1465 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 BCLAF3A2AJT9 711 aaKnown RBP6.4□□□□□ -1.39
CDKL5-205ENST00000623535 TMEM150CB9EJG8 249 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 RASA4BC9J798 803 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 CD3EAPO15446 510 aaKnown RBP6.4□□□□□ -1.39
CDKL5-205ENST00000623535 RASA4O43374 803 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 OR6B1O95007 311 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 MATN4O95460 622 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 ATXN1P54253 815 aaKnown RBP6.4□□□□□ -1.39
CDKL5-205ENST00000623535 NDUFA5Q16718 116 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 POTEAQ6S8J7 498 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 PTF1AQ7RTS3 328 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 SLFN11Q7Z7L1 901 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 SFR1Q86XK3 245 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 APLFQ8IW19 511 aaPredicted RBP6.4□□□□□ -1.39
CDKL5-205ENST00000623535 TMEM156Q8N614 296 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 ATXN7L3BQ96GX2 97 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 RIT2Q99578 217 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.4□□□□□ -1.39
CDKL5-205ENST00000623535 SPRTNQ9H040 489 aaPredicted RBP6.4□□□□□ -1.39
CDKL5-205ENST00000623535 CAB39LQ9H9S4 337 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 DUS2Q9NX74 493 aaKnown RBP6.4□□□□□ -1.39
CDKL5-205ENST00000623535 CEP72Q9P209 647 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 MTO1Q9Y2Z2 717 aaKnown RBP6.4□□□□□ -1.39
CDKL5-205ENST00000623535 ITGB3P05106 788 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 ICAM1P05362 532 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 DLG1Q12959 904 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 MARC1Q5VT66 337 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 LIN54Q6MZP7 749 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 FAM83AQ86UY5 434 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 SYT12Q8IV01 421 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 TCEAL3Q969E4 200 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 NACC2Q96BF6 587 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 CDCA5Q96FF9 252 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 RIPK3Q9Y572 518 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 CNTNAP2Q9UHC6 1331 aa6.4□□□□□ -1.39
CDKL5-205ENST00000623535 PSMD11O00231 422 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 CD63P08962 238 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 PRKAG1P54619 331 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 MC1RQ01726 317 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 SLC29A2Q14542 456 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 HSDL1Q3SXM5 330 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 PITPNM3Q9BZ71 974 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 TMEM39BQ9GZU3 492 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 CDH19Q9H159 772 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 EPB41L5Q9HCM4 733 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 RIMKLBQ9ULI2 386 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 PBRM1Q86U86 1689 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 ACSL3O95573 720 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 NAMPTP43490 491 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 HCAR3P49019 387 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 NAA20P61599 178 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 PSMD5Q16401 504 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 HLFQ16534 295 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 MINDY4Q4G0A6 757 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 METTL7BQ6UX53 244 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 MAGEE2Q8TD90 523 aaPredicted RBP6.39□□□□□ -1.39
CDKL5-205ENST00000623535 TMEM47Q9BQJ4 181 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 NDC1Q9BTX1 674 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 ANKZF1Q9H8Y5 726 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 G3V2T6 193 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 TP53P04637 393 aaPredicted RBP6.39□□□□□ -1.39
CDKL5-205ENST00000623535 HOXB8P17481 243 aaPredicted RBP6.39□□□□□ -1.39
CDKL5-205ENST00000623535 CAMK2DQ13557 499 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 ALKBH5Q6P6C2 394 aaKnown RBP6.39□□□□□ -1.39
CDKL5-205ENST00000623535 ZC3HC1Q86WB0 502 aaKnown RBP6.39□□□□□ -1.39
CDKL5-205ENST00000623535 RASGRP4Q8TDF6 673 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 TSPAN18Q96SJ8 248 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 KIAA1522Q9P206 1035 aaPredicted RBP6.39□□□□□ -1.39
CDKL5-205ENST00000623535 TRIM64CA6NLI5 447 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 FOXD2O60548 495 aaPredicted RBP6.39□□□□□ -1.39
CDKL5-205ENST00000623535 SELPP16109 830 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 GGCXP38435 758 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 GRM4Q14833 912 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 NOMO2Q5JPE7 1267 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 CENPLQ8N0S6 344 aaPredicted RBP6.39□□□□□ -1.39
CDKL5-205ENST00000623535 C3orf20Q8ND61 904 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 RAD54LQ92698 747 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 MFSD14AQ96MC6 490 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 ADAM2Q99965 735 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 EFCAB1Q9HAE3 211 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 GNPTGQ9UJJ9 305 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 ZNF229Q9UJW7 825 aa6.39□□□□□ -1.39
CDKL5-205ENST00000623535 XPO1O14980 1071 aaKnown RBP6.39□□□□□ -1.39
CDKL5-205ENST00000623535 SLC16A3O15427 465 aaKnown RBP6.39□□□□□ -1.39
CDKL5-205ENST00000623535 PLEKHA8P1O95397 391 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms