RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 GANCQ8TET4 914 aa14.34□□□□□ -0.11
PCDHGC3-208ENST00000622836 FNIP1Q8TF40 1166 aa14.34□□□□□ -0.11
PCDHGC3-208ENST00000622836 MYO19Q96H55 970 aa14.34□□□□□ -0.11
PCDHGC3-208ENST00000622836 CCDC42Q96M95 316 aa14.34□□□□□ -0.11
PCDHGC3-208ENST00000622836 EPAS1Q99814 870 aa14.34□□□□□ -0.11
PCDHGC3-208ENST00000622836 MAGEB5Q9BZ81 275 aa14.34□□□□□ -0.11
PCDHGC3-208ENST00000622836 CD93Q9NPY3 652 aa14.34□□□□□ -0.11
PCDHGC3-208ENST00000622836 PCSK1NQ9UHG2 260 aa14.34□□□□□ -0.11
PCDHGC3-208ENST00000622836 MBD1Q9UIS9 605 aaPredicted RBP14.34□□□□□ -0.11
PCDHGC3-208ENST00000622836 FZD10Q9ULW2 581 aa14.34□□□□□ -0.11
PCDHGC3-208ENST00000622836 DMDP11532 3685 aa14.34□□□□□ -0.11
PCDHGC3-208ENST00000622836 CKAP5Q14008 2032 aa14.34□□□□□ -0.11
PCDHGC3-208ENST00000622836 ABCA7Q8IZY2 2146 aa14.33□□□□□ -0.11
PCDHGC3-208ENST00000622836 MUC22E2RYF6 1773 aaPredicted RBP14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 IGHV1OR15-9A0A0B4J2B8 117 aa14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 A0A0D9SEW6 157 aa14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 TARSL2A2RTX5 802 aaKnown RBP14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 CBX4O00257 560 aa14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 BNIP3LO60238 219 aa14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 PRPSAP2O60256 369 aa14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 SIN3BO75182 1162 aa14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 RHOQP17081 205 aa14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 EPHB2P29323 1055 aa14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 CD6P30203 668 aa14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 L1CAMP32004 1257 aa14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 MAPKAPK2P49137 400 aa14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 TPMTP51580 245 aa14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 CCDC6Q16204 474 aa14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 ZNF776Q68DI1 518 aaPredicted RBP14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 IL31Q6EBC2 164 aa14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 ZNF783Q6ZMS7 281 aa14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 FAM124AQ86V42 546 aa14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 ZNF354CQ86Y25 554 aa14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 DEFB119Q8N690 84 aa14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 ATP11CQ8NB49 1132 aa14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 ALG14Q96F25 216 aa14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 NUP85Q9BW27 656 aa14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 TRIM7Q9C029 511 aa14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 ATP13A1Q9HD20 1204 aa14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 ITM2CQ9NQX7 267 aa14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 DNAI1Q9UI46 699 aa14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 PCDHGA5Q9Y5G8 931 aa14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 THADAQ6YHU6 1953 aa14.33□□□□□ -0.12
PCDHGC3-208ENST00000622836 SSU72P8A0A1W2PR75 194 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 ILVBLA1L0T0 632 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 SNAP91O60641 907 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 LRP3O75074 770 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 OXTRP30559 389 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 ETFBP38117 255 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 MPLP40238 635 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 GALCP54803 685 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 TPI1P60174 286 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 GNA12Q03113 381 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 ZNF252P-AS1Q0IIN9 211 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 SLC18A3Q16572 532 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 MANEALQ5VSG8 457 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 LYSMD4Q5XG99 296 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 RETSATQ6NUM9 610 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 METTL3Q86U44 580 aaKnown RBP14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 DCAF4L2Q8NA75 395 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 OR7D4Q8NG98 312 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 CTNNBL1Q8WYA6 563 aaPredicted RBP14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 PIGKQ92643 395 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 NCAPGQ9BPX3 1015 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 DHX35Q9H5Z1 703 aaKnown RBP14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 RETREG1Q9H6L5 497 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 CATSPERBQ9H7T0 1116 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 SEMA4GQ9NTN9 838 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 TMEM248Q9NWD8 314 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 GPATCH2LQ9NWQ4 482 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 USP36Q9P275 1121 aaKnown RBP14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 CTTNBP2NLQ9P2B4 639 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 IP6K2Q9UHH9 426 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 VPS51Q9UID3 782 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 ANAPC7Q9UJX3 599 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 AP4E1Q9UPM8 1137 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 NCKAP1Q9Y2A7 1128 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 OR51B4Q9Y5P0 310 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 ZNF292O60281 2723 aa14.32□□□□□ -0.12
PCDHGC3-208ENST00000622836 DAPK3O43293 454 aa14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 RAMP2O60895 175 aa14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 MIPP30301 263 aa14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 PTGER3P43115 390 aa14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 SSR1P43307 286 aaKnown RBP14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 PSMD8P48556 350 aa14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 RPS14P62263 151 aaKnown RBP14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 ZBTB16Q05516 673 aa14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 SFSWAPQ12872 951 aaKnown RBP14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 MAPK8IP2Q13387 824 aaPredicted RBP14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 PIGHQ14442 188 aaPredicted RBP14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 ARID5BQ14865 1188 aa14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 ACAP1Q15027 740 aa14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 DLG2Q15700 870 aa14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 ERMARDQ5T6L9 678 aa14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 C9orf64Q5T6V5 341 aa14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 LINGO4Q6UY18 593 aa14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 DSG4Q86SJ6 1040 aa14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 GAS2L3Q86XJ1 694 aa14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 MMAAQ8IVH4 418 aaKnown RBP14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 STK40Q8N2I9 435 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms