RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 CCNKO75909 580 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 GFAPP14136 432 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 NAGAP17050 411 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 XRCC1P18887 633 aaPredicted RBP8.07□□□□□ -1.12
VPS11-209ENST00000622309 SLC26A2P50443 739 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 FXR2P51116 673 aaKnown RBP eCLIP8.07□□□□□ -1.12
VPS11-209ENST00000622309 PRKAA2P54646 552 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 TMBIM6P55061 237 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 RPS8P62241 208 aaKnown RBP8.07□□□□□ -1.12
VPS11-209ENST00000622309 FAAP100Q0VG06 881 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 C16orf46Q6P387 395 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 IDO2Q6ZQW0 420 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 TNS4Q8IZW8 715 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 MZB1Q8WU39 189 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 MAP6Q96JE9 813 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 FEM1CQ96JP0 617 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 RMDN3Q96TC7 470 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 RTKNQ9BST9 563 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 CHID1Q9BWS9 393 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 SP140LQ9H930 580 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 PARVAQ9NVD7 372 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 PKD2L2Q9NZM6 624 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 SUCOQ9UBS9 1254 aaKnown RBP8.07□□□□□ -1.12
VPS11-209ENST00000622309 APEX2Q9UBZ4 518 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 ANKRD36CQ5JPF3 1778 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 FADS2P1A8MWK0 482 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 H0YIN7 160 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 PLOD2O00469 737 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 DCXO43602 365 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 GPC4O75487 556 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 IFNB1P01574 187 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 GLRA2P23416 452 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 RFC4P35249 363 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 SOX11P35716 441 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 SLC18A2Q05940 514 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 VAC14Q08AM6 782 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 HERC3Q15034 1050 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 SNX17Q15036 470 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 CLEC16AQ2KHT3 1053 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 SNAP47Q5SQN1 464 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 ATG14Q6ZNE5 492 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 ZBTB49Q6ZSB9 765 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 HAUS6Q7Z4H7 955 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 RNF148Q8N7C7 305 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 TMEM102Q8N9M5 508 aaPredicted RBP8.07□□□□□ -1.12
VPS11-209ENST00000622309 PIWIL2Q8TC59 973 aaKnown RBP8.07□□□□□ -1.12
VPS11-209ENST00000622309 EPS8L1Q8TE68 723 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 HTRA1Q92743 480 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 ZUFSPQ96AP4 578 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 PPWD1Q96BP3 646 aaKnown RBP8.07□□□□□ -1.12
VPS11-209ENST00000622309 ZFYVE19Q96K21 471 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 HERPUD2Q9BSE4 406 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 INTS2Q9H0H0 1204 aaKnown RBP8.07□□□□□ -1.12
VPS11-209ENST00000622309 C8orf4Q9NR00 106 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 POLE4Q9NR33 117 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 UCKL1Q9NWZ5 548 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 BARHL2Q9NY43 387 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 ABI2Q9NYB9 513 aaPredicted RBP8.07□□□□□ -1.12
VPS11-209ENST00000622309 EDARQ9UNE0 448 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 RWDD3Q9Y3V2 267 aa8.07□□□□□ -1.12
VPS11-209ENST00000622309 CICQ96RK0 1608 aaPredicted RBP8.07□□□□□ -1.12
VPS11-209ENST00000622309 PDXKO00764 312 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 ACOX3O15254 700 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 SLC16A3O15427 465 aaKnown RBP8.06□□□□□ -1.12
VPS11-209ENST00000622309 HTRA2O43464 458 aaPredicted RBP8.06□□□□□ -1.12
VPS11-209ENST00000622309 DLGAP3O95886 979 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 PRLP01236 227 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 HNF1BP35680 557 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 GJC1P36383 396 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 FMO5P49326 533 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 PKNOX1P55347 436 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 DSTNP60981 165 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 C19orf57Q0VDD7 668 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 TMEM119Q4V9L6 283 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 C6orf132Q5T0Z8 1188 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 ERAP2Q6P179 960 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 POMZP3Q6PJE2 187 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 ZCCHC23Q6ZST2 131 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 RHPN2Q8IUC4 686 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 HERC6Q8IVU3 1022 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 PPM1NQ8N819 430 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 GRPEL2Q8TAA5 225 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 KLRG1Q96E93 195 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 SLC10A4Q96EP9 437 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 EMILIN2Q9BXX0 1053 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 FAM96AQ9H5X1 160 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 ANAPC7Q9UJX3 599 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 SHOC2Q9UQ13 582 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 TESMINQ9Y4I5 508 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 SNX13Q9Y5W8 968 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 CLUHO75153 1309 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 CROCCQ5TZA2 2017 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.06□□□□□ -1.12
VPS11-209ENST00000622309 H3BUI4 141 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 B4GALT4O60513 344 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 RFPL2O75678 378 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 GSNP06396 782 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 PLA2G4BP0C869 781 aa8.06□□□□□ -1.12
VPS11-209ENST00000622309 MTHFD1P11586 935 aaKnown RBP8.06□□□□□ -1.12
VPS11-209ENST00000622309 MYL4P12829 197 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms