RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 ST8SIA6P61647 398 aa19.05■□□□□ 0.64
CIRBP-245ENST00000621399 CSTF1Q05048 431 aaKnown RBP19.05■□□□□ 0.64
CIRBP-245ENST00000621399 ANGPT1Q15389 498 aa19.05■□□□□ 0.64
CIRBP-245ENST00000621399 CRY1Q16526 586 aa19.05■□□□□ 0.64
CIRBP-245ENST00000621399 IFI16Q16666 785 aaKnown RBP19.05■□□□□ 0.64
CIRBP-245ENST00000621399 PTPRNQ16849 979 aa19.05■□□□□ 0.64
CIRBP-245ENST00000621399 LRRC38Q5VT99 294 aa19.05■□□□□ 0.64
CIRBP-245ENST00000621399 POLNQ7Z5Q5 900 aa19.05■□□□□ 0.64
CIRBP-245ENST00000621399 MAP7D3Q8IWC1 876 aa19.05■□□□□ 0.64
CIRBP-245ENST00000621399 RHOT1Q8IXI2 618 aa19.05■□□□□ 0.64
CIRBP-245ENST00000621399 MAML2Q8IZL2 1156 aaPredicted RBP19.05■□□□□ 0.64
CIRBP-245ENST00000621399 OR7D4Q8NG98 312 aa19.05■□□□□ 0.64
CIRBP-245ENST00000621399 GABRG3Q99928 467 aa19.05■□□□□ 0.64
CIRBP-245ENST00000621399 C2orf49Q9BVC5 232 aaPredicted RBP19.05■□□□□ 0.64
CIRBP-245ENST00000621399 PRMT8Q9NR22 394 aaPredicted RBP19.05■□□□□ 0.64
CIRBP-245ENST00000621399 KLHL11Q9NVR0 708 aa19.05■□□□□ 0.64
CIRBP-245ENST00000621399 TRIM10Q9UDY6 481 aa19.05■□□□□ 0.64
CIRBP-245ENST00000621399 ERVW-1Q9UQF0 538 aa19.05■□□□□ 0.64
CIRBP-245ENST00000621399 RAMP2O60895 175 aa19.04■□□□□ 0.64
CIRBP-245ENST00000621399 PAPSS2O95340 614 aaPredicted RBP19.04■□□□□ 0.64
CIRBP-245ENST00000621399 SRPRAP08240 638 aaKnown RBP19.04■□□□□ 0.64
CIRBP-245ENST00000621399 ERCC2P18074 760 aa19.04■□□□□ 0.64
CIRBP-245ENST00000621399 ETFBP38117 255 aa19.04■□□□□ 0.64
CIRBP-245ENST00000621399 DGKEP52429 567 aa19.04■□□□□ 0.64
CIRBP-245ENST00000621399 POLD3Q15054 466 aaPredicted RBP19.04■□□□□ 0.64
CIRBP-245ENST00000621399 PDK2Q15119 407 aa19.04■□□□□ 0.64
CIRBP-245ENST00000621399 IL31Q6EBC2 164 aa19.04■□□□□ 0.64
CIRBP-245ENST00000621399 TSSK4Q6SA08 328 aa19.04■□□□□ 0.64
CIRBP-245ENST00000621399 RPL10LQ96L21 214 aaKnown RBP19.04■□□□□ 0.64
CIRBP-245ENST00000621399 CSPG4P5Q96PW8 444 aa19.04■□□□□ 0.64
CIRBP-245ENST00000621399 CALN1Q9BXU9 219 aa19.04■□□□□ 0.64
CIRBP-245ENST00000621399 TSGA10Q9BZW7 698 aa19.04■□□□□ 0.64
CIRBP-245ENST00000621399 MAGEH1Q9H213 219 aa19.04■□□□□ 0.64
CIRBP-245ENST00000621399 ATP13A1Q9HD20 1204 aa19.04■□□□□ 0.64
CIRBP-245ENST00000621399 FBXO4Q9UKT5 387 aa19.04■□□□□ 0.64
CIRBP-245ENST00000621399 CBX4O00257 560 aa19.03■□□□□ 0.64
CIRBP-245ENST00000621399 EPHX1P07099 455 aa19.03■□□□□ 0.64
CIRBP-245ENST00000621399 CD48P09326 243 aa19.03■□□□□ 0.64
CIRBP-245ENST00000621399 AMPD1P23109 780 aa19.03■□□□□ 0.64
CIRBP-245ENST00000621399 HOXD11P31277 338 aaPredicted RBP19.03■□□□□ 0.64
CIRBP-245ENST00000621399 ACVRL1P37023 503 aa19.03■□□□□ 0.64
CIRBP-245ENST00000621399 NNMTP40261 264 aa19.03■□□□□ 0.64
CIRBP-245ENST00000621399 ARSEP51690 589 aa19.03■□□□□ 0.64
CIRBP-245ENST00000621399 ENPP2Q13822 863 aa19.03■□□□□ 0.64
CIRBP-245ENST00000621399 DPYSQ14117 519 aa19.03■□□□□ 0.64
CIRBP-245ENST00000621399 ODF2Q5BJF6 829 aa19.03■□□□□ 0.64
CIRBP-245ENST00000621399 TMEM92Q6UXU6 159 aa19.03■□□□□ 0.64
CIRBP-245ENST00000621399 UMODL1-AS1Q8N2C9 162 aa19.03■□□□□ 0.64
CIRBP-245ENST00000621399 DCAF4L2Q8NA75 395 aa19.03■□□□□ 0.64
CIRBP-245ENST00000621399 TSTD1Q8NFU3 115 aa19.03■□□□□ 0.64
CIRBP-245ENST00000621399 FAM71BQ8TC56 605 aa19.03■□□□□ 0.64
CIRBP-245ENST00000621399 KIAA1524Q8TCG1 905 aa19.03■□□□□ 0.64
CIRBP-245ENST00000621399 ARHGEF2Q92974 986 aaKnown RBP19.03■□□□□ 0.64
CIRBP-245ENST00000621399 ERLEC1Q96DZ1 483 aa19.03■□□□□ 0.64
CIRBP-245ENST00000621399 MRGPRX3Q96LB0 322 aa19.03■□□□□ 0.64
CIRBP-245ENST00000621399 ZNF830Q96NB3 372 aaPredicted RBP19.03■□□□□ 0.64
CIRBP-245ENST00000621399 HHIPQ96QV1 700 aa19.03■□□□□ 0.64
CIRBP-245ENST00000621399 PSMB7Q99436 277 aa19.03■□□□□ 0.64
CIRBP-245ENST00000621399 TMEM245Q9H330 911 aa19.03■□□□□ 0.64
CIRBP-245ENST00000621399 POLMQ9NP87 494 aaPredicted RBP19.03■□□□□ 0.64
CIRBP-245ENST00000621399 RCOR3Q9P2K3 495 aaPredicted RBP19.03■□□□□ 0.64
CIRBP-245ENST00000621399 SLCO3A1Q9UIG8 710 aa19.03■□□□□ 0.64
CIRBP-245ENST00000621399 SLC25A13Q9UJS0 675 aa19.03■□□□□ 0.64
CIRBP-245ENST00000621399 RAD54BQ9Y620 910 aa19.03■□□□□ 0.64
CIRBP-245ENST00000621399 PIEZO1Q92508 2521 aa19.02■□□□□ 0.64
CIRBP-245ENST00000621399 K7ESF4 209 aa19.02■□□□□ 0.64
CIRBP-245ENST00000621399 KRT86O43790 486 aa19.02■□□□□ 0.64
CIRBP-245ENST00000621399 SYNCRIPO60506 623 aaKnown RBP19.02■□□□□ 0.64
CIRBP-245ENST00000621399 SNAP91O60641 907 aa19.02■□□□□ 0.64
CIRBP-245ENST00000621399 IL4RP24394 825 aa19.02■□□□□ 0.64
CIRBP-245ENST00000621399 PRKCHP24723 683 aa19.02■□□□□ 0.64
CIRBP-245ENST00000621399 STK19P49842 368 aaPredicted RBP19.02■□□□□ 0.64
CIRBP-245ENST00000621399 NDST2P52849 883 aa19.02■□□□□ 0.64
CIRBP-245ENST00000621399 YBEYP58557 167 aaPredicted RBP19.02■□□□□ 0.64
CIRBP-245ENST00000621399 MMRN1Q13201 1228 aa19.02■□□□□ 0.64
CIRBP-245ENST00000621399 DPYSL3Q14195 570 aa19.02■□□□□ 0.64
CIRBP-245ENST00000621399 STARD3Q14849 445 aa19.02■□□□□ 0.64
CIRBP-245ENST00000621399 ZNF354CQ86Y25 554 aa19.02■□□□□ 0.64
CIRBP-245ENST00000621399 CAMKK1Q8N5S9 505 aa19.02■□□□□ 0.64
CIRBP-245ENST00000621399 RNF10Q8N5U6 811 aaKnown RBP19.02■□□□□ 0.64
CIRBP-245ENST00000621399 KDM1BQ8NB78 822 aa19.02■□□□□ 0.64
CIRBP-245ENST00000621399 RAPGEF5Q92565 580 aa19.02■□□□□ 0.64
CIRBP-245ENST00000621399 TSC1Q92574 1164 aa19.02■□□□□ 0.64
CIRBP-245ENST00000621399 NOL6Q9H6R4 1146 aaKnown RBP19.02■□□□□ 0.64
CIRBP-245ENST00000621399 DDX56Q9NY93 547 aaKnown RBP19.02■□□□□ 0.64
CIRBP-245ENST00000621399 VPS51Q9UID3 782 aa19.02■□□□□ 0.64
CIRBP-245ENST00000621399 HPCAL4Q9UM19 191 aa19.02■□□□□ 0.64
CIRBP-245ENST00000621399 GUCA1BQ9UMX6 200 aa19.02■□□□□ 0.64
CIRBP-245ENST00000621399 HCN4Q9Y3Q4 1203 aa19.02■□□□□ 0.64
CIRBP-245ENST00000621399 KMT2EQ8IZD2 1858 aa19.02■□□□□ 0.64
CIRBP-245ENST00000621399 MUC6Q6W4X9 2439 aa19.02■□□□□ 0.63
CIRBP-245ENST00000621399 A0A1W2PQF6 199 aa19.01■□□□□ 0.63
CIRBP-245ENST00000621399 LRRD1A4D1F6 860 aa19.01■□□□□ 0.63
CIRBP-245ENST00000621399 GRID2IPA4D2P6 1211 aa19.01■□□□□ 0.63
CIRBP-245ENST00000621399 RASA4BC9J798 803 aa19.01■□□□□ 0.63
CIRBP-245ENST00000621399 ZBTB24O43167 697 aaPredicted RBP19.01■□□□□ 0.63
CIRBP-245ENST00000621399 RASA4O43374 803 aa19.01■□□□□ 0.63
CIRBP-245ENST00000621399 PSTPIP1O43586 416 aa19.01■□□□□ 0.63
CIRBP-245ENST00000621399 PALMO75781 387 aa19.01■□□□□ 0.63
CIRBP-245ENST00000621399 ALDH1A2O94788 518 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms