RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 ZNF135P52742 658 aaPredicted RBP7.29□□□□□ -1.24
COLCA1-205ENST00000620864 LPIN1Q14693 890 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 LRRC71Q8N4P6 559 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 SPIRE2Q8WWL2 714 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 CCDC115Q96NT0 180 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 DPY30Q9C005 99 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 MTMR12Q9C0I1 747 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 KCNF1Q9H3M0 494 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 NMRAL1Q9HBL8 299 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 C12orf4Q9NQ89 552 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 MCUBQ9NWR8 336 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 GPRC5DQ9NZD1 345 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 H3BN98 237 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 PDHXO00330 501 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 CYP26A1O43174 497 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 HMBSP08397 361 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 GZMAP12544 262 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 ERCC2P18074 760 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 ATF4P18848 351 aaPredicted RBP7.29□□□□□ -1.24
COLCA1-205ENST00000620864 ACTR3P61158 418 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 ELF3P78545 371 aaPredicted RBP7.29□□□□□ -1.24
COLCA1-205ENST00000620864 SCN1BQ07699 218 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 PWP1Q13610 501 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 CCNIQ14094 377 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 ALG11Q2TAA5 492 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 GALNTL6Q49A17 601 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 ZRANB3Q5FWF4 1079 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 CWF19L1Q69YN2 538 aaKnown RBP7.29□□□□□ -1.24
COLCA1-205ENST00000620864 C11orf63Q6NUN7 778 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 ZNF746Q6NUN9 644 aaPredicted RBP7.29□□□□□ -1.24
COLCA1-205ENST00000620864 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.29□□□□□ -1.24
COLCA1-205ENST00000620864 BSNDQ8WZ55 320 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 PAFAH2Q99487 392 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 TMEM117Q9H0C3 514 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 ABCB10Q9NRK6 738 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 CDC42BPAQ5VT25 1732 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 DGAT1O75907 488 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 GSSP48637 474 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 UTS2BQ765I0 119 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 DHDDSQ86SQ9 333 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 TC2NQ8N9U0 490 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 POMGNT2Q8NAT1 580 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 LRRC46Q96FV0 321 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 SPACA7Q96KW9 195 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 MUC3BQ9H195 1237 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 TUBE1Q9UJT0 475 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 PRPF19Q9UMS4 504 aaKnown RBP7.29□□□□□ -1.24
COLCA1-205ENST00000620864 SYNPO2Q9UMS6 1093 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 A0A087X1B8 175 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 AGRPO00253 132 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 KMOO15229 486 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 RGS10O43665 173 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 CYP1A1P04798 512 aaPredicted RBP7.29□□□□□ -1.24
COLCA1-205ENST00000620864 ERP29P30040 261 aaKnown RBP7.29□□□□□ -1.24
COLCA1-205ENST00000620864 SV2CQ496J9 727 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 SGMS1Q86VZ5 419 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 ZNF276Q8N554 614 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 SCAIQ8N9R8 606 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 NT5C1AQ9BXI3 368 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 XKR8Q9H6D3 395 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 C17orf75Q9HAS0 396 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 PNPLA8Q9NP80 782 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 TBC1D13Q9NVG8 400 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 ZNF224Q9NZL3 707 aa7.29□□□□□ -1.24
COLCA1-205ENST00000620864 UBQLN1Q9UMX0 589 aaKnown RBP7.29□□□□□ -1.24
COLCA1-205ENST00000620864 RPH3AQ9Y2J0 694 aaPredicted RBP7.29□□□□□ -1.24
COLCA1-205ENST00000620864 CST8O60676 142 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 SMNDC1O75940 238 aaKnown RBP eCLIP7.28□□□□□ -1.24
COLCA1-205ENST00000620864 CAMTA2O94983 1202 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 CHRNGP07510 517 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 GPR1P46091 355 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 MGAT5Q09328 741 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 GRSF1Q12849 480 aaKnown RBP eCLIP7.28□□□□□ -1.24
COLCA1-205ENST00000620864 CCNG2Q16589 344 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 PGS1Q32NB8 556 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 RGMBQ6NW40 437 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 RPTNQ6XPR3 784 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 CSGALNACT1Q8TDX6 532 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 PHF12Q96QT6 1004 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 CPNE1Q99829 537 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 APOL5Q9BWW9 433 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 NLNQ9BYT8 704 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 TRIM9Q9C026 710 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 TRIT1Q9H3H1 467 aaKnown RBP7.28□□□□□ -1.24
COLCA1-205ENST00000620864 EPB41L1Q9H4G0 881 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 SP140LQ9H930 580 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 PIH1D3Q9NQM4 214 aaKnown RBP7.28□□□□□ -1.24
COLCA1-205ENST00000620864 VPS45Q9NRW7 570 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 GIT1Q9Y2X7 761 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 A0A088AWK7 358 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 FCHO1O14526 889 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 SLC16A4O15374 487 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 LSM8O95777 96 aaKnown RBP7.28□□□□□ -1.24
COLCA1-205ENST00000620864 RB1P06400 928 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 FGRP09769 529 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 ZNF10P21506 573 aaPredicted RBP7.28□□□□□ -1.24
COLCA1-205ENST00000620864 ADORA2BP29275 332 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 OMPP47874 163 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 OR1G1P47890 313 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 CPT1AP50416 773 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms