RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 PTP4A2Q12974 167 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 CYP1B1Q16678 543 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 ARCQ7LC44 396 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 ZNF410Q86VK4 478 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 ULK2Q8IYT8 1036 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 PPP1R10Q96QC0 940 aaKnown RBP8.5□□□□□ -1.05
ALMS1-208ENST00000620466 EBNA1BP2Q99848 306 aaKnown RBP8.5□□□□□ -1.05
ALMS1-208ENST00000620466 DDX28Q9NUL7 540 aaKnown RBP8.5□□□□□ -1.05
ALMS1-208ENST00000620466 SYBUQ9NX95 663 aa8.5□□□□□ -1.05
ALMS1-208ENST00000620466 C5orf60A6NFR6 353 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 SYNCRIPO60506 623 aaKnown RBP8.49□□□□□ -1.05
ALMS1-208ENST00000620466 DEAF1O75398 565 aaPredicted RBP8.49□□□□□ -1.05
ALMS1-208ENST00000620466 TNFAIP8O95379 198 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 URODP06132 367 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 YBX3P16989 372 aaKnown RBP eCLIP8.49□□□□□ -1.05
ALMS1-208ENST00000620466 ME2P23368 584 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 GABRB2P47870 512 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 OXCT1P55809 520 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 MRPS22P82650 360 aaKnown RBP8.49□□□□□ -1.05
ALMS1-208ENST00000620466 EIF2B5Q13144 721 aaKnown RBP8.49□□□□□ -1.05
ALMS1-208ENST00000620466 PLD1Q13393 1074 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 BFSP2Q13515 415 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 ZFP1Q6P2D0 407 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 ABHD15Q6UXT9 468 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 DHFR2Q86XF0 187 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 C10orf107Q8IVU9 208 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 BBS7Q8IWZ6 715 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 GLT1D1Q96MS3 346 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 ZNF670Q9BS34 389 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 PIF1Q9H611 641 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 POPDC2Q9HBU9 364 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 NMRK1Q9NWW6 199 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 TMEM114B3SHH9 223 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 B3GAT3O94766 335 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 LGALS2P05162 132 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 USP17L7P0C7H9 530 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 MIER2Q8N344 545 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 UCMAQ8WVF2 138 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 CPT1BQ92523 772 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 CERS2Q96G23 380 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 ZFRQ96KR1 1074 aaKnown RBP8.49□□□□□ -1.05
ALMS1-208ENST00000620466 EMILIN2Q9BXX0 1053 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 SEPT3Q9UH03 358 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 CORO1CQ9ULV4 474 aaPredicted RBP8.49□□□□□ -1.05
ALMS1-208ENST00000620466 AP4S1Q9Y587 144 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 CICQ96RK0 1608 aaPredicted RBP8.49□□□□□ -1.05
ALMS1-208ENST00000620466 HMGB3O15347 200 aaKnown RBP8.49□□□□□ -1.05
ALMS1-208ENST00000620466 DYRK3O43781 588 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 MGRN1O60291 552 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 MMP8P22894 467 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 ANGPT1Q15389 498 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 ALFQ53S48 1182 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 CACHD1Q5VU97 1274 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 ANKRD22Q5VYY1 191 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 ZNF470Q6ECI4 717 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 DHDDSQ86SQ9 333 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 RIOX2Q8IUF8 465 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 THUMPD3Q9BV44 507 aaKnown RBP8.49□□□□□ -1.05
ALMS1-208ENST00000620466 ADAM28Q9UKQ2 775 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 GTF2A1LQ9UNN4 478 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 HOXA2O43364 376 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 DAB1O75553 588 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 CREB1P16220 341 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 GOT1P17174 413 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 CDKN2BP42772 138 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 KPNA1P52294 538 aaPredicted RBP8.49□□□□□ -1.05
ALMS1-208ENST00000620466 CHN2P52757 468 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 EFEMP1Q12805 493 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 PTPN20Q4JDL3 420 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 CTXN3Q4LDR2 81 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 RNASEH2BQ5TBB1 312 aaKnown RBP8.49□□□□□ -1.05
ALMS1-208ENST00000620466 CYP2R1Q6VVX0 501 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 LPCAT2Q7L5N7 544 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 DEFB128Q7Z7B8 93 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 MIB1Q86YT6 1006 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 RIN3Q8TB24 985 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 TKTL2Q9H0I9 626 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 ST6GALNAC4Q9H4F1 302 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 MPP6Q9NZW5 540 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 SLC12A4Q9UP95 1085 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 NKRFO15226 690 aaKnown RBP eCLIP8.49□□□□□ -1.05
ALMS1-208ENST00000620466 VPS26AO75436 327 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 FGFR3P22607 806 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 TTLL9Q3SXZ7 439 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 UNC5AQ6ZN44 842 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 C12orf29Q8N999 325 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 SLC44A1Q8WWI5 657 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 TMEM169Q96HH4 297 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 LHX5Q9H2C1 402 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 WDR41Q9HAD4 459 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 PALMDQ9NP74 551 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 SCN3BQ9NY72 215 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 VPS9D1Q9Y2B5 631 aa8.49□□□□□ -1.05
ALMS1-208ENST00000620466 EVPLLA8MZ36 301 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 F8W810 466 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 MRASO14807 208 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 LIN7AO14910 233 aaPredicted RBP8.48□□□□□ -1.05
ALMS1-208ENST00000620466 GSC2O15499 205 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 BAIAP3O94812 1187 aa8.48□□□□□ -1.05
ALMS1-208ENST00000620466 TPBGLP0DKB5 382 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms