RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 GRIA4P48058 902 aa16.38■□□□□ 0.21
DKC1-213ENST00000620277 ART3Q13508 389 aa16.38■□□□□ 0.21
DKC1-213ENST00000620277 SEMA5AQ13591 1074 aa16.38■□□□□ 0.21
DKC1-213ENST00000620277 GRM3Q14832 879 aa16.38■□□□□ 0.21
DKC1-213ENST00000620277 SLC5A9Q2M3M2 681 aa16.38■□□□□ 0.21
DKC1-213ENST00000620277 TMCO4Q5TGY1 634 aa16.38■□□□□ 0.21
DKC1-213ENST00000620277 DCUN1D1Q96GG9 259 aa16.38■□□□□ 0.21
DKC1-213ENST00000620277 NMRAL1Q9HBL8 299 aa16.38■□□□□ 0.21
DKC1-213ENST00000620277 PIGVQ9NUD9 493 aa16.38■□□□□ 0.21
DKC1-213ENST00000620277 PGAM1P18669 254 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 ETFBP38117 255 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 DPYSL2Q16555 572 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 RIOX2Q8IUF8 465 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 DSELQ8IZU8 1212 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 CEP70Q8NHQ1 597 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 URGCPQ8TCY9 931 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 TRIM8Q9BZR9 551 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 ZNF408Q9H9D4 720 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 RHBDL2Q9NX52 303 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 TPST1O60507 370 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 RTN3O95197 1032 aaPredicted RBP16.37■□□□□ 0.21
DKC1-213ENST00000620277 MCF2P10911 925 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 ERCC2P18074 760 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 NIPAL4Q0D2K0 466 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 FBXO48Q5FWF7 155 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 NOMO2Q5JPE7 1267 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 AMIGO2Q86SJ2 522 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 TMEM110Q86TL2 294 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 SLC39A3Q9BRY0 314 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 SLC4A5Q9BY07 1137 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 ASB7Q9H672 318 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 LRRC4Q9HBW1 653 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 CHST12Q9NRB3 414 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 TLK1Q9UKI8 766 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 HNRNPRO43390 633 aaKnown RBP16.37■□□□□ 0.21
DKC1-213ENST00000620277 RECQL4O94761 1208 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 TGFB3P10600 412 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 NFKB1P19838 968 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 MAGEA3P43357 314 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 MPP1Q00013 466 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 SEPT6Q14141 434 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 GK5Q6ZS86 529 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 TMC7Q7Z402 723 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 DIS3LQ8TF46 1054 aaKnown RBP16.37■□□□□ 0.21
DKC1-213ENST00000620277 LRRC39Q96DD0 335 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 NR1H4Q96RI1 486 aaPredicted RBP16.37■□□□□ 0.21
DKC1-213ENST00000620277 CDH19Q9H159 772 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 BFARQ9NZS9 450 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 LZTS1Q9Y250 596 aa16.37■□□□□ 0.21
DKC1-213ENST00000620277 ZNF195O14628 629 aa16.36■□□□□ 0.21
DKC1-213ENST00000620277 MDM4O15151 490 aa16.36■□□□□ 0.21
DKC1-213ENST00000620277 GARSP41250 739 aaKnown RBP16.36■□□□□ 0.21
DKC1-213ENST00000620277 RPS6KA3P51812 740 aa16.36■□□□□ 0.21
DKC1-213ENST00000620277 PRAMEP78395 509 aa16.36■□□□□ 0.21
DKC1-213ENST00000620277 MPP3Q13368 585 aa16.36■□□□□ 0.21
DKC1-213ENST00000620277 C11orf91Q3C1V1 193 aa16.36■□□□□ 0.21
DKC1-213ENST00000620277 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.36■□□□□ 0.212e-6■■■□□ 15
DKC1-213ENST00000620277 RTP4Q96DX8 246 aa16.36■□□□□ 0.21
DKC1-213ENST00000620277 H3BNX3 289 aa16.36■□□□□ 0.21
DKC1-213ENST00000620277 DFFAO00273 331 aa16.36■□□□□ 0.21
DKC1-213ENST00000620277 NCAM1P13591 858 aa16.36■□□□□ 0.21
DKC1-213ENST00000620277 TPSB2P20231 275 aa16.36■□□□□ 0.21
DKC1-213ENST00000620277 DPP6P42658 865 aa16.36■□□□□ 0.21
DKC1-213ENST00000620277 TNFAIP2Q03169 654 aa16.36■□□□□ 0.21
DKC1-213ENST00000620277 TTLL4Q14679 1199 aa16.36■□□□□ 0.21
DKC1-213ENST00000620277 TPSAB1Q15661 275 aa16.36■□□□□ 0.21
DKC1-213ENST00000620277 PCSK7Q16549 785 aa16.36■□□□□ 0.21
DKC1-213ENST00000620277 LRRC8BQ6P9F7 803 aa16.36■□□□□ 0.21
DKC1-213ENST00000620277 KCNMB4Q86W47 210 aa16.36■□□□□ 0.21
DKC1-213ENST00000620277 IPMKQ8NFU5 416 aa16.36■□□□□ 0.21
DKC1-213ENST00000620277 ACTRT2Q8TDY3 377 aa16.36■□□□□ 0.21
DKC1-213ENST00000620277 ABTB1Q969K4 478 aaPredicted RBP16.36■□□□□ 0.21
DKC1-213ENST00000620277 PHF21BQ96EK2 531 aa16.36■□□□□ 0.21
DKC1-213ENST00000620277 ZFP42Q96MM3 310 aa16.36■□□□□ 0.21
DKC1-213ENST00000620277 TRAPPC9Q96Q05 1148 aa16.36■□□□□ 0.21
DKC1-213ENST00000620277 RBPJLQ9UBG7 517 aa16.36■□□□□ 0.21
DKC1-213ENST00000620277 ZNF112Q9UJU3 913 aa16.36■□□□□ 0.21
DKC1-213ENST00000620277 PIN4Q9Y237 131 aaKnown RBP16.36■□□□□ 0.21
DKC1-213ENST00000620277 PTPRFP10586 1907 aa16.36■□□□□ 0.21
DKC1-213ENST00000620277 SF3B1O75533 1304 aaKnown RBP eCLIP16.35■□□□□ 0.213e-6■■■■■ 30.3
DKC1-213ENST00000620277 H3BRB1 525 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 NRP1O14786 923 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 TRIM13O60858 407 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 DDNO94850 711 aaPredicted RBP16.35■□□□□ 0.21
DKC1-213ENST00000620277 SEC24DO94855 1032 aaPredicted RBP16.35■□□□□ 0.21
DKC1-213ENST00000620277 VAPBO95292 243 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 ATICP31939 592 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 ACAD11Q709F0 780 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 LDB1Q86U70 411 aaPredicted RBP16.35■□□□□ 0.21
DKC1-213ENST00000620277 NPWQ8N729 165 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 NAT14Q8WUY8 206 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 ATP6V1E2Q96A05 226 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 VPS39Q96JC1 886 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 RPL10LQ96L21 214 aaKnown RBP16.35■□□□□ 0.21
DKC1-213ENST00000620277 C12orf42Q96LP6 360 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 PKP2Q99959 881 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 ACE2Q9BYF1 805 aaPredicted RBP16.35■□□□□ 0.21
DKC1-213ENST00000620277 ILKAPQ9H0C8 392 aaPredicted RBP16.35■□□□□ 0.21
DKC1-213ENST00000620277 TUT1Q9H6E5 874 aaKnown RBP16.35■□□□□ 0.21
DKC1-213ENST00000620277 CCDC167Q9P0B6 97 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms