RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 RFC2P35250 354 aa19.46■□□□□ 0.71
PSPC1-206ENST00000619300 CRYMQ14894 314 aa19.46■□□□□ 0.71
PSPC1-206ENST00000619300 KIAA1841Q6NSI8 718 aa19.46■□□□□ 0.71
PSPC1-206ENST00000619300 OTOP3Q7RTS5 596 aa19.46■□□□□ 0.71
PSPC1-206ENST00000619300 YTHDF3Q7Z739 585 aaKnown RBP19.46■□□□□ 0.71
PSPC1-206ENST00000619300 DNAAF3Q8N9W5 541 aa19.46■□□□□ 0.71
PSPC1-206ENST00000619300 TCP10LQ8TDR4 215 aa19.46■□□□□ 0.71
PSPC1-206ENST00000619300 USP33Q8TEY7 942 aa19.46■□□□□ 0.71
PSPC1-206ENST00000619300 TOP1MTQ969P6 601 aa19.46■□□□□ 0.71
PSPC1-206ENST00000619300 ZYG11BQ9C0D3 744 aa19.46■□□□□ 0.71
PSPC1-206ENST00000619300 LRRC40Q9H9A6 602 aa19.46■□□□□ 0.71
PSPC1-206ENST00000619300 DONSONQ9NYP3 566 aa19.46■□□□□ 0.71
PSPC1-206ENST00000619300 GRID1Q9ULK0 1009 aa19.46■□□□□ 0.71
PSPC1-206ENST00000619300 MRPL42Q9Y6G3 142 aaKnown RBP19.46■□□□□ 0.71
PSPC1-206ENST00000619300 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.46■□□□□ 0.71
PSPC1-206ENST00000619300 IGLV3-27P01718 113 aa19.46■□□□□ 0.71
PSPC1-206ENST00000619300 PYGBP11216 843 aa19.46■□□□□ 0.71
PSPC1-206ENST00000619300 SERPINB9P50453 376 aa19.46■□□□□ 0.71
PSPC1-206ENST00000619300 PAPOLAP51003 745 aaKnown RBP19.46■□□□□ 0.71
PSPC1-206ENST00000619300 SEPT7Q16181 437 aaKnown RBP19.46■□□□□ 0.71
PSPC1-206ENST00000619300 TIGD7Q6NT04 549 aaPredicted RBP19.46■□□□□ 0.71
PSPC1-206ENST00000619300 LVRNQ6Q4G3 990 aa19.46■□□□□ 0.71
PSPC1-206ENST00000619300 KLHDC8BQ8IXV7 354 aa19.46■□□□□ 0.71
PSPC1-206ENST00000619300 UNC5BQ8IZJ1 945 aa19.46■□□□□ 0.71
PSPC1-206ENST00000619300 UMODL1-AS1Q8N2C9 162 aa19.46■□□□□ 0.71
PSPC1-206ENST00000619300 ANKS4BQ8N8V4 417 aa19.46■□□□□ 0.71
PSPC1-206ENST00000619300 MTBPQ96DY7 904 aa19.46■□□□□ 0.71
PSPC1-206ENST00000619300 CCSER2Q9H7U1 834 aa19.46■□□□□ 0.71
PSPC1-206ENST00000619300 MAGED2Q9UNF1 606 aaPredicted RBP19.46■□□□□ 0.71
PSPC1-206ENST00000619300 IGLV3-10A0A075B6K4 115 aa19.45■□□□□ 0.7
PSPC1-206ENST00000619300 GOLGA6L7A0A1B0GV03 622 aa19.45■□□□□ 0.7
PSPC1-206ENST00000619300 SNX3O60493 162 aa19.45■□□□□ 0.7
PSPC1-206ENST00000619300 LPXNO60711 386 aa19.45■□□□□ 0.7
PSPC1-206ENST00000619300 KIAA0754O94854 1291 aa19.45■□□□□ 0.7
PSPC1-206ENST00000619300 RING1Q06587 406 aa19.45■□□□□ 0.7
PSPC1-206ENST00000619300 PDK4Q16654 411 aa19.45■□□□□ 0.7
PSPC1-206ENST00000619300 ACBD5Q5T8D3 534 aaPredicted RBP19.45■□□□□ 0.7
PSPC1-206ENST00000619300 RGS9BPQ6ZS82 235 aa19.45■□□□□ 0.7
PSPC1-206ENST00000619300 CDKL2Q92772 493 aa19.45■□□□□ 0.7
PSPC1-206ENST00000619300 NOL6Q9H6R4 1146 aaKnown RBP19.45■□□□□ 0.7
PSPC1-206ENST00000619300 UBP1Q9NZI7 540 aa19.45■□□□□ 0.7
PSPC1-206ENST00000619300 AAR2Q9Y312 384 aaKnown RBP19.45■□□□□ 0.7
PSPC1-206ENST00000619300 ABHD14A-ACY1A0A1B0GW23 586 aa19.44■□□□□ 0.7
PSPC1-206ENST00000619300 ANKRD65E5RJM6 399 aa19.44■□□□□ 0.7
PSPC1-206ENST00000619300 C2CD2LO14523 706 aa19.44■□□□□ 0.7
PSPC1-206ENST00000619300 TLR5O60602 858 aa19.44■□□□□ 0.7
PSPC1-206ENST00000619300 HMBSP08397 361 aa19.44■□□□□ 0.7
PSPC1-206ENST00000619300 CLTBP09497 229 aa19.44■□□□□ 0.7
PSPC1-206ENST00000619300 NPY2RP49146 381 aa19.44■□□□□ 0.7
PSPC1-206ENST00000619300 KPNA1P52294 538 aaPredicted RBP19.44■□□□□ 0.7
PSPC1-206ENST00000619300 NDST2P52849 883 aa19.44■□□□□ 0.7
PSPC1-206ENST00000619300 NIPAL4Q0D2K0 466 aa19.44■□□□□ 0.7
PSPC1-206ENST00000619300 ITIH4Q14624 930 aa19.44■□□□□ 0.7
PSPC1-206ENST00000619300 SPANXN3Q5MJ09 141 aa19.44■□□□□ 0.7
PSPC1-206ENST00000619300 SPOUT1Q5T280 376 aaKnown RBP19.44■□□□□ 0.7
PSPC1-206ENST00000619300 FBXL22Q6P050 247 aa19.44■□□□□ 0.7
PSPC1-206ENST00000619300 APOPT1Q96IL0 206 aa19.44■□□□□ 0.7
PSPC1-206ENST00000619300 FCRL5Q96RD9 977 aa19.44■□□□□ 0.7
PSPC1-206ENST00000619300 CLSTN3Q9BQT9 956 aa19.44■□□□□ 0.7
PSPC1-206ENST00000619300 GLOD4Q9HC38 313 aa19.44■□□□□ 0.7
PSPC1-206ENST00000619300 TMEM248Q9NWD8 314 aa19.44■□□□□ 0.7
PSPC1-206ENST00000619300 RPS6KL1Q9Y6S9 549 aa19.44■□□□□ 0.7
PSPC1-206ENST00000619300 MAGEB16A2A368 324 aa19.44■□□□□ 0.7
PSPC1-206ENST00000619300 AP3B1O00203 1094 aa19.44■□□□□ 0.7
PSPC1-206ENST00000619300 NEK3P51956 506 aa19.44■□□□□ 0.7
PSPC1-206ENST00000619300 CORO7P57737 925 aa19.44■□□□□ 0.7
PSPC1-206ENST00000619300 NAPEPLDQ6IQ20 393 aa19.44■□□□□ 0.7
PSPC1-206ENST00000619300 MARK2Q7KZI7 788 aaKnown RBP19.44■□□□□ 0.7
PSPC1-206ENST00000619300 LINC00523Q86TU6 105 aa19.44■□□□□ 0.7
PSPC1-206ENST00000619300 ZNF276Q8N554 614 aa19.44■□□□□ 0.7
PSPC1-206ENST00000619300 ZNF689Q96CS4 500 aaPredicted RBP19.44■□□□□ 0.7
PSPC1-206ENST00000619300 ZNF419Q96HQ0 510 aaPredicted RBP19.44■□□□□ 0.7
PSPC1-206ENST00000619300 ZNF333Q96JL9 665 aa19.44■□□□□ 0.7
PSPC1-206ENST00000619300 CDK5RAP1Q96SZ6 601 aaKnown RBP19.44■□□□□ 0.7
PSPC1-206ENST00000619300 WBP1LQ9NX94 342 aa19.44■□□□□ 0.7
PSPC1-206ENST00000619300 AFF4Q9UHB7 1163 aaKnown RBP19.44■□□□□ 0.7
PSPC1-206ENST00000619300 IPO11Q9UI26 975 aaKnown RBP19.44■□□□□ 0.7
PSPC1-206ENST00000619300 DRGXA6NNA5 263 aa19.43■□□□□ 0.7
PSPC1-206ENST00000619300 RFPL1O75677 317 aa19.43■□□□□ 0.7
PSPC1-206ENST00000619300 SOD2P04179 222 aa19.43■□□□□ 0.7
PSPC1-206ENST00000619300 CNTFP26441 200 aa19.43■□□□□ 0.7
PSPC1-206ENST00000619300 MGAT5Q09328 741 aa19.43■□□□□ 0.7
PSPC1-206ENST00000619300 MTA1Q13330 715 aa19.43■□□□□ 0.7
PSPC1-206ENST00000619300 NAB1Q13506 487 aa19.43■□□□□ 0.7
PSPC1-206ENST00000619300 ALFQ53S48 1182 aa19.43■□□□□ 0.7
PSPC1-206ENST00000619300 RAP1GAP2Q684P5 730 aa19.43■□□□□ 0.7
PSPC1-206ENST00000619300 ZNF449Q6P9G9 518 aa19.43■□□□□ 0.7
PSPC1-206ENST00000619300 TFAP2DQ7Z6R9 452 aa19.43■□□□□ 0.7
PSPC1-206ENST00000619300 TMEM135Q86UB9 458 aa19.43■□□□□ 0.7
PSPC1-206ENST00000619300 OTUD6BQ8N6M0 293 aa19.43■□□□□ 0.7
PSPC1-206ENST00000619300 ZNF461Q8TAF7 563 aa19.43■□□□□ 0.7
PSPC1-206ENST00000619300 IGSF8Q969P0 613 aa19.43■□□□□ 0.7
PSPC1-206ENST00000619300 FCRL3Q96P31 734 aaPredicted RBP19.43■□□□□ 0.7
PSPC1-206ENST00000619300 PITPNM3Q9BZ71 974 aa19.43■□□□□ 0.7
PSPC1-206ENST00000619300 RBM22Q9NW64 420 aaKnown RBP eCLIP19.43■□□□□ 0.7
PSPC1-206ENST00000619300 SLC17A7Q9P2U7 560 aa19.43■□□□□ 0.7
PSPC1-206ENST00000619300 MICAL3Q7RTP6 2002 aa19.43■□□□□ 0.7
PSPC1-206ENST00000619300 HMX2A2RU54 273 aa19.42■□□□□ 0.7
PSPC1-206ENST00000619300 ANXA9O76027 345 aa19.42■□□□□ 0.7
PSPC1-206ENST00000619300 CNTN5O94779 1100 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms