RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 ZNF236Q9UL36 1845 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 TRIP12Q14669 1992 aaPredicted RBP4.42□□□□□ -1.7
SEC22B-202ENST00000618538 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.42□□□□□ -1.7
SEC22B-202ENST00000618538 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.42□□□□□ -1.7
SEC22B-202ENST00000618538 ASB14A6NK59 587 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 KPNA7A9QM74 516 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 PTGESO14684 152 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 GPR37O15354 613 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 DAB1O75553 588 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 LUC7L3O95232 432 aaKnown RBP4.42□□□□□ -1.7
SEC22B-202ENST00000618538 LMNAP02545 664 aaKnown RBP4.42□□□□□ -1.7
SEC22B-202ENST00000618538 JUNP05412 331 aaKnown RBP4.42□□□□□ -1.7
SEC22B-202ENST00000618538 MLNP12872 115 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 ARSAP15289 507 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 TIMP2P16035 220 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 PGAM1P18669 254 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 ITGAXP20702 1163 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 PTPN3P26045 913 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 SCNN1AP37088 669 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 PEX19P40855 299 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 IREB2P48200 963 aaKnown RBP4.42□□□□□ -1.7
SEC22B-202ENST00000618538 SLC1A6P48664 564 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 GLUD2P49448 558 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 HARS2P49590 506 aaKnown RBP4.42□□□□□ -1.7
SEC22B-202ENST00000618538 CDC16Q13042 620 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 USP4Q13107 963 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 MAP2K5Q13163 448 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 MSLNQ13421 630 aaPredicted RBP4.42□□□□□ -1.7
SEC22B-202ENST00000618538 PAFAH1B3Q15102 231 aaKnown RBP4.42□□□□□ -1.7
SEC22B-202ENST00000618538 DCAF4L1Q3SXM0 396 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 SLC9B1Q4ZJI4 515 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 DCAF6Q58WW2 860 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 CERCAMQ5T4B2 595 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 KCTD11Q693B1 232 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 IRGCQ6NXR0 463 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 CASC4Q6P4E1 433 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 TMEM154Q6P9G4 183 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 PGM2L1Q6PCE3 622 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 KYAT3Q6YP21 454 aaKnown RBP4.42□□□□□ -1.7
SEC22B-202ENST00000618538 CLEC20AQ6ZU45 233 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 FRMD7Q6ZUT3 714 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 STRADAQ7RTN6 431 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 NET1Q7Z628 596 aaPredicted RBP4.42□□□□□ -1.7
SEC22B-202ENST00000618538 CLEC14AQ86T13 490 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 ZNF410Q86VK4 478 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 ZDHHC17Q8IUH5 632 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 CRLF3Q8IUI8 442 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 DCLK2Q8N568 766 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 ZNF781Q8N8C0 355 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 SMG8Q8ND04 991 aaKnown RBP4.42□□□□□ -1.7
SEC22B-202ENST00000618538 SHCBP1Q8NEM2 672 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 ZMIZ2Q8NF64 920 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 PIWIL2Q8TC59 973 aaKnown RBP4.42□□□□□ -1.7
SEC22B-202ENST00000618538 PYDC1Q8WXC3 89 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 APBB2Q92870 758 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 PGBD4Q96DM1 585 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 MFSD3Q96ES6 412 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 CERS2Q96G23 380 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 SLC2A13Q96QE2 648 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 SPOCK3Q9BQ16 436 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 DDX50Q9BQ39 737 aaKnown RBP4.42□□□□□ -1.7
SEC22B-202ENST00000618538 APOL2Q9BQE5 337 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 RHOBTB2Q9BYZ6 727 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 FAM124BQ9H5Z6 455 aaPredicted RBP4.42□□□□□ -1.7
SEC22B-202ENST00000618538 PLEKHA5Q9HAU0 1116 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 VTA1Q9NP79 307 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 MAN1C1Q9NR34 630 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 SNX15Q9NRS6 342 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 ADARB2Q9NS39 739 aaKnown RBP4.42□□□□□ -1.7
SEC22B-202ENST00000618538 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.42□□□□□ -1.7
SEC22B-202ENST00000618538 GDAP2Q9NXN4 497 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.42□□□□□ -1.7
SEC22B-202ENST00000618538 SEPT10Q9P0V9 454 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 DLGAP2Q9P1A6 1054 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 COPG2Q9UBF2 871 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 ZNF212Q9UDV6 495 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 MAGED2Q9UNF1 606 aaPredicted RBP4.42□□□□□ -1.7
SEC22B-202ENST00000618538 NEU3Q9UQ49 428 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 DERAQ9Y315 318 aa4.42□□□□□ -1.7
SEC22B-202ENST00000618538 MRPL42Q9Y6G3 142 aaKnown RBP4.42□□□□□ -1.7
SEC22B-202ENST00000618538 SF3B1O75533 1304 aaKnown RBP eCLIP4.42□□□□□ -1.7
SEC22B-202ENST00000618538 HTTP42858 3142 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 CCDC78A2IDD5 438 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 ENO4A6NNW6 628 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 YJEFN3A6XGL0 299 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 HACD1B0YJ81 288 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 F8W8V4 182 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 SPECC1L-ADORA2AF8WAN1 911 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 H3BNX3 289 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 GOLGA8TH3BQL2 631 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 M0QYT0 321 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 XPO1O14980 1071 aaKnown RBP4.41□□□□□ -1.7
SEC22B-202ENST00000618538 CREB3O43889 395 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 OPHN1O60890 802 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 RNASEH1O60930 286 aaKnown RBP4.41□□□□□ -1.7
SEC22B-202ENST00000618538 GLRA3O75311 464 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 SERPINE1P05121 402 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 CHRNGP07510 517 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 SMIM10L2AP0DMW4 78 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 SMIM10L2BP0DMW5 78 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms