RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 CASQ2O14958 399 aaPredicted RBP13.43□□□□□ -0.26
MSH6-214ENST00000616033 MED7O43513 233 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 ATP6AP2O75787 350 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 PSMB4P28070 264 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 CCND2P30279 289 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 PLK1P53350 603 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 PRPSAP1Q14558 356 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 PID1Q7Z2X4 250 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 FAM131BQ86XD5 332 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 OR52K1Q8NGK4 314 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 CLEC4CQ8WTT0 213 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 FAM149B1Q96BN6 582 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 GCOM2Q9BZD3 368 aaPredicted RBP13.43□□□□□ -0.26
MSH6-214ENST00000616033 ELOVL4Q9GZR5 314 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 DRC3Q9H069 523 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 TRNAU1APQ9NX07 287 aaKnown RBP13.43□□□□□ -0.26
MSH6-214ENST00000616033 RNF11Q9Y3C5 154 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 RNF103-CHMP3A0A140T963 221 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 VAPBO95292 243 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 GNAO1P09471 354 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 LCP1P13796 627 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 EEF1B2P24534 225 aaKnown RBP13.43□□□□□ -0.26
MSH6-214ENST00000616033 ASPAP45381 313 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 ZNF132P52740 706 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 SP2Q02086 613 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 DGKDQ16760 1214 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 FAM47CQ5HY64 1035 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 ZBTB49Q6ZSB9 765 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 ZNF534Q76KX8 674 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 SULF1Q8IWU6 871 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 SLC35B4Q969S0 331 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 RTKNQ9BST9 563 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 ILKAPQ9H0C8 392 aaPredicted RBP13.43□□□□□ -0.26
MSH6-214ENST00000616033 RPAP3Q9H6T3 665 aaPredicted RBP13.43□□□□□ -0.26
MSH6-214ENST00000616033 ZNF70Q9UC06 446 aaPredicted RBP13.43□□□□□ -0.26
MSH6-214ENST00000616033 SORCS3Q9UPU3 1222 aa13.43□□□□□ -0.26
MSH6-214ENST00000616033 RGSL1A5PLK6 1076 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 TMEM221A6NGB7 291 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 DENRO43583 198 aaKnown RBP13.42□□□□□ -0.26
MSH6-214ENST00000616033 NFICP08651 508 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 MCF2P10911 925 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 HNRNPLP14866 589 aaKnown RBP eCLIP13.42□□□□□ -0.26
MSH6-214ENST00000616033 L1CAMP32004 1257 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 CD151P48509 253 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 XKR3Q5GH77 459 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 ARL13AQ5H913 290 aaPredicted RBP13.42□□□□□ -0.26
MSH6-214ENST00000616033 GLRA4Q5JXX5 417 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 EEF1DP3Q658K8 133 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 SEL1L3Q68CR1 1132 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 SLC2A7Q6PXP3 512 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 NIPA2Q8N8Q9 360 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 DDI1Q8WTU0 396 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 CNPY3Q9BT09 278 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 HAUS8Q9BT25 410 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 RBM38Q9H0Z9 239 aaKnown RBP13.42□□□□□ -0.26
MSH6-214ENST00000616033 VPS51Q9UID3 782 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 RIMS3Q9UJD0 308 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 RAB26Q9ULW5 256 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 A0A1W2PPW3 197 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 A0A1W2PQ67 120 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 HTR3EA5X5Y0 456 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 UNCXA6NJT0 531 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 GRK2P25098 689 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 PTPN7P35236 360 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 RCVRNP35243 200 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 ESRRGP62508 458 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 POU5F1BQ06416 359 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 BNIP3Q12983 259 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 NME3Q13232 169 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 MGAT5BQ3V5L5 792 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 TTC33Q6PID6 262 aaPredicted RBP13.42□□□□□ -0.26
MSH6-214ENST00000616033 GPR141Q7Z602 305 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 AHI1Q8N157 1196 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 FNDC8Q8TC99 324 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 PIF1Q9H611 641 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 TSPAN16Q9UKR8 245 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 MYRFQ9Y2G1 1151 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 AP4S1Q9Y587 144 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 TRIP11Q15643 1979 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 GOT1P17174 413 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 IL4RP24394 825 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 GRIA4P48058 902 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 XIAPP98170 497 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 SMUG1Q53HV7 270 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 BRSK2Q8IWQ3 736 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 CASP10Q92851 521 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 MFSD3Q96ES6 412 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 ZMAT2Q96NC0 199 aaKnown RBP13.42□□□□□ -0.26
MSH6-214ENST00000616033 ACO2Q99798 780 aaKnown RBP13.42□□□□□ -0.26
MSH6-214ENST00000616033 ZNF518BQ9C0D4 1074 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 TIMMDC1Q9NPL8 285 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 EGFL7Q9UHF1 273 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 ZDHHC2Q9UIJ5 367 aa13.42□□□□□ -0.26
MSH6-214ENST00000616033 ENTPD3O75355 529 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 ZNF143P52747 638 aaPredicted RBP13.41□□□□□ -0.26
MSH6-214ENST00000616033 ACOT1Q86TX2 421 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 KBTBD7Q8WVZ9 684 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 SREK1Q8WXA9 508 aaKnown RBP13.41□□□□□ -0.26
MSH6-214ENST00000616033 NAA50Q9GZZ1 169 aaKnown RBP13.41□□□□□ -0.26
MSH6-214ENST00000616033 PTPRHQ9HD43 1115 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms