RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 TLL1O43897 1013 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 FKBP6O75344 327 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 SPAG7O75391 227 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 CIB2O75838 187 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 CALB1P05937 261 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 TCF4P15884 667 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 GCAP28676 217 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 TKTP29401 623 aaKnown RBP13.38□□□□□ -0.27
FOXN3-219ENST00000615335 CCT8P50990 548 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 SLC18A1P54219 525 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 HTRA4P83105 476 aaPredicted RBP13.38□□□□□ -0.27
FOXN3-219ENST00000615335 LRRC38Q5VT99 294 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 SPOCD1Q6ZMY3 1216 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 TDRPQ86YL5 185 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 PEX5LQ8IYB4 626 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 CRYBG2Q8N1P7 616 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 THEM5Q8N1Q8 247 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 LSM14AQ8ND56 463 aaKnown RBP13.38□□□□□ -0.27
FOXN3-219ENST00000615335 ZNF558Q96NG5 402 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 DRC3Q9H069 523 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 RBM38Q9H0Z9 239 aaKnown RBP13.38□□□□□ -0.27
FOXN3-219ENST00000615335 EBF3Q9H4W6 596 aa13.38□□□□□ -0.27
FOXN3-219ENST00000615335 DRG1Q9Y295 367 aaKnown RBP13.38□□□□□ -0.27
FOXN3-219ENST00000615335 GOLGA8TH3BQL2 631 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 NDUFB5O43674 189 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 TRMUO75648 421 aaKnown RBP13.37□□□□□ -0.27
FOXN3-219ENST00000615335 ETS1P14921 441 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 TYMPP19971 482 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 SPARCL1Q14515 664 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 MORF4L2Q15014 288 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 C9orf50Q5SZB4 431 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 PPP1R26Q5T8A7 1209 aaPredicted RBP13.37□□□□□ -0.27
FOXN3-219ENST00000615335 DNAJC24Q6P3W2 148 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 DCUN1D2Q6PH85 259 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 FIBCD1Q8N539 461 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 B3GALNT2Q8NCR0 500 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 BCL7CQ8WUZ0 217 aaPredicted RBP13.37□□□□□ -0.27
FOXN3-219ENST00000615335 B3GALT6Q96L58 329 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 RAD9AQ99638 391 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 VPS37BQ9H9H4 285 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 GPC6Q9Y625 555 aaPredicted RBP13.37□□□□□ -0.27
FOXN3-219ENST00000615335 SYN3O14994 580 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 PRPF4O43172 522 aaKnown RBP eCLIP13.37□□□□□ -0.272e-6■■■□□ 15.8
FOXN3-219ENST00000615335 CLPTM1O96005 669 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 EIF2S1P05198 315 aaKnown RBP13.37□□□□□ -0.27
FOXN3-219ENST00000615335 PTPN1P18031 435 aaKnown RBP13.37□□□□□ -0.27
FOXN3-219ENST00000615335 LAG3P18627 525 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 PCSK1P29120 753 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 ZNF252P-AS1Q0IIN9 211 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 ELAVL2Q12926 359 aaKnown RBP13.37□□□□□ -0.27
FOXN3-219ENST00000615335 DNAJC3Q13217 504 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 PDK4Q16654 411 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 HP1BP3Q5SSJ5 553 aaPredicted RBP13.37□□□□□ -0.27
FOXN3-219ENST00000615335 DEPDC1Q5TB30 811 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 TMCO4Q5TGY1 634 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 MTDHQ86UE4 582 aaKnown RBP13.37□□□□□ -0.27
FOXN3-219ENST00000615335 SPATA18Q8TC71 538 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 IGSF21Q96ID5 467 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 COX4I2Q96KJ9 171 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 MCEEQ96PE7 176 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 MRPS26Q9BYN8 205 aaKnown RBP13.37□□□□□ -0.27
FOXN3-219ENST00000615335 TRABDQ9H4I3 376 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 TSPAN16Q9UKR8 245 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 PCDHGC3Q9UN70 934 aa13.37□□□□□ -0.27
FOXN3-219ENST00000615335 F8VP50 259 aa13.36□□□□□ -0.27
FOXN3-219ENST00000615335 LSM8O95777 96 aaKnown RBP13.36□□□□□ -0.27
FOXN3-219ENST00000615335 CCDC130P13994 396 aa13.36□□□□□ -0.27
FOXN3-219ENST00000615335 KRT15P19012 456 aa13.36□□□□□ -0.27
FOXN3-219ENST00000615335 VCPP55072 806 aaKnown RBP13.36□□□□□ -0.27
FOXN3-219ENST00000615335 FASTKD3Q14CZ7 662 aaKnown RBP13.36□□□□□ -0.27
FOXN3-219ENST00000615335 TFDP3Q5H9I0 405 aa13.36□□□□□ -0.27
FOXN3-219ENST00000615335 KIAA0319Q5VV43 1072 aa13.36□□□□□ -0.27
FOXN3-219ENST00000615335 AAGABQ6PD74 315 aa13.36□□□□□ -0.27
FOXN3-219ENST00000615335 DHRS4L2Q6PKH6 230 aa13.36□□□□□ -0.27
FOXN3-219ENST00000615335 CENPUQ71F23 418 aa13.36□□□□□ -0.27
FOXN3-219ENST00000615335 COLGALT1Q8NBJ5 622 aa13.36□□□□□ -0.27
FOXN3-219ENST00000615335 DDI1Q8WTU0 396 aa13.36□□□□□ -0.27
FOXN3-219ENST00000615335 TMEM169Q96HH4 297 aa13.36□□□□□ -0.27
FOXN3-219ENST00000615335 ACBD6Q9BR61 282 aa13.36□□□□□ -0.27
FOXN3-219ENST00000615335 CYLDQ9NQC7 956 aa13.36□□□□□ -0.27
FOXN3-219ENST00000615335 DDX56Q9NY93 547 aaKnown RBP13.36□□□□□ -0.27
FOXN3-219ENST00000615335 UBAP1Q9NZ09 502 aa13.36□□□□□ -0.27
FOXN3-219ENST00000615335 SENP1Q9P0U3 644 aa13.36□□□□□ -0.27
FOXN3-219ENST00000615335 CDH9Q9ULB4 789 aa13.36□□□□□ -0.27
FOXN3-219ENST00000615335 SMG5Q9UPR3 1016 aaKnown RBP13.36□□□□□ -0.27
FOXN3-219ENST00000615335 TTLL3Q9Y4R7 772 aa13.36□□□□□ -0.27
FOXN3-219ENST00000615335 SPO11Q9Y5K1 396 aa13.36□□□□□ -0.27
FOXN3-219ENST00000615335 TSC2P49815 1807 aa13.36□□□□□ -0.27
FOXN3-219ENST00000615335 VWA8A3KMH1 1905 aa13.36□□□□□ -0.27
FOXN3-219ENST00000615335 hCG_1818297A0A087WSY0 165 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 M0QYV0 167 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 ALOX15BO15296 676 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 MICAL2O94851 1124 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 PTPN7P35236 360 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 PGM1P36871 562 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 PIGHQ14442 188 aaPredicted RBP13.35□□□□□ -0.27
FOXN3-219ENST00000615335 PDK3Q15120 406 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 SHHQ15465 462 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 ZNF423Q2M1K9 1284 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 ANKRD20A4Q4UJ75 823 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms