RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 CLCNKBP51801 687 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 BCAT1P54687 386 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 PLTPP55058 493 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 CD83Q01151 205 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 GALNT1Q10472 559 aaPredicted RBP9.01□□□□□ -0.97
VPS11-206ENST00000614944 GLRA4Q5JXX5 417 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 METTL11BQ5VVY1 283 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 METTL23Q86XA0 190 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 GATAD2AQ86YP4 633 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 TMEM199Q8N511 208 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 ANKRD53Q8N9V6 530 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 ARHGEF26Q96DR7 871 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 CCDC77Q9BR77 488 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 TLR10Q9BXR5 811 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 CSNK1G1Q9HCP0 422 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 WDR6Q9NNW5 1121 aaKnown RBP9.01□□□□□ -0.97
VPS11-206ENST00000614944 SEPT11Q9NVA2 429 aaKnown RBP9.01□□□□□ -0.97
VPS11-206ENST00000614944 TBC1D13Q9NVG8 400 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 TRNAU1APQ9NX07 287 aaKnown RBP9.01□□□□□ -0.97
VPS11-206ENST00000614944 MEIS3P2A8K0S8 358 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 CENPBD1B2RD01 187 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 XPO1O14980 1071 aaKnown RBP9.01□□□□□ -0.97
VPS11-206ENST00000614944 PALMO75781 387 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 OR5F1O95221 314 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 FGFR1P11362 822 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 RAP1GAPP47736 663 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 MLLT6P55198 1093 aaPredicted RBP9.01□□□□□ -0.97
VPS11-206ENST00000614944 BST2Q10589 180 aaKnown RBP9.01□□□□□ -0.97
VPS11-206ENST00000614944 KCNJ8Q15842 424 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 PARP6Q2NL67 630 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 VSIG1Q86XK7 387 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 MMAAQ8IVH4 418 aaKnown RBP9.01□□□□□ -0.97
VPS11-206ENST00000614944 DTX3Q8N9I9 347 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 MDM1Q8TC05 714 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 C2orf15Q8WU43 125 aaKnown RBP9.01□□□□□ -0.97
VPS11-206ENST00000614944 LPPQ93052 612 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 PMEPA1Q969W9 287 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 ELAC2Q9BQ52 826 aaKnown RBP9.01□□□□□ -0.97
VPS11-206ENST00000614944 COLEC11Q9BWP8 271 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 TMEM39AQ9NV64 488 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 ARMC1Q9NVT9 282 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 CNOT8Q9UFF9 292 aaKnown RBP9.01□□□□□ -0.97
VPS11-206ENST00000614944 COG5Q9UP83 839 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 ERVK-11Q9UQG0 969 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 TRAV6A0A075B6T7 132 aa9□□□□□ -0.97
VPS11-206ENST00000614944 IQANK1A0A1B0GTG1 560 aa9□□□□□ -0.97
VPS11-206ENST00000614944 OLFM2O95897 454 aa9□□□□□ -0.97
VPS11-206ENST00000614944 C1RP00736 705 aa9□□□□□ -0.97
VPS11-206ENST00000614944 KRT6AP02538 564 aa9□□□□□ -0.97
VPS11-206ENST00000614944 KRT6BP04259 564 aa9□□□□□ -0.97
VPS11-206ENST00000614944 CD58P19256 250 aa9□□□□□ -0.97
VPS11-206ENST00000614944 CDH8P55286 799 aa9□□□□□ -0.97
VPS11-206ENST00000614944 MAMLD1Q13495 774 aa9□□□□□ -0.97
VPS11-206ENST00000614944 SF3B4Q15427 424 aaKnown RBP eCLIP9□□□□□ -0.97
VPS11-206ENST00000614944 TAF12Q16514 161 aa9□□□□□ -0.97
VPS11-206ENST00000614944 TCTN1Q2MV58 587 aa9□□□□□ -0.97
VPS11-206ENST00000614944 WASHC2DQ5SRD0 308 aa9□□□□□ -0.97
VPS11-206ENST00000614944 DENND1BQ6P3S1 775 aa9□□□□□ -0.97
VPS11-206ENST00000614944 MMGT1Q8N4V1 131 aa9□□□□□ -0.97
VPS11-206ENST00000614944 RNF169Q8NCN4 708 aa9□□□□□ -0.97
VPS11-206ENST00000614944 B3GALNT2Q8NCR0 500 aa9□□□□□ -0.97
VPS11-206ENST00000614944 ZNF564Q8TBZ8 553 aaPredicted RBP9□□□□□ -0.97
VPS11-206ENST00000614944 ACTRT1Q8TDG2 376 aa9□□□□□ -0.97
VPS11-206ENST00000614944 VPS35Q96QK1 796 aa9□□□□□ -0.97
VPS11-206ENST00000614944 GPATCH1Q9BRR8 931 aaKnown RBP9□□□□□ -0.97
VPS11-206ENST00000614944 UNKQ9C0B0 810 aaKnown RBP9□□□□□ -0.97
VPS11-206ENST00000614944 RNF38Q9H0F5 515 aa9□□□□□ -0.97
VPS11-206ENST00000614944 MARCH7Q9H992 704 aa9□□□□□ -0.97
VPS11-206ENST00000614944 WASH6PQ9NQA3 447 aa9□□□□□ -0.97
VPS11-206ENST00000614944 ABI2Q9NYB9 513 aaPredicted RBP9□□□□□ -0.97
VPS11-206ENST00000614944 ZNHIT2Q9UHR6 403 aa9□□□□□ -0.97
VPS11-206ENST00000614944 DMGDHQ9UI17 866 aaKnown RBP9□□□□□ -0.97
VPS11-206ENST00000614944 TMEM191CA6NGB0 347 aa9□□□□□ -0.97
VPS11-206ENST00000614944 KLHL41O60662 606 aa9□□□□□ -0.97
VPS11-206ENST00000614944 FGFR3P22607 806 aa9□□□□□ -0.97
VPS11-206ENST00000614944 CTNNA1P35221 906 aaKnown RBP9□□□□□ -0.97
VPS11-206ENST00000614944 PTPN7P35236 360 aa9□□□□□ -0.97
VPS11-206ENST00000614944 ZNF135P52742 658 aaPredicted RBP9□□□□□ -0.97
VPS11-206ENST00000614944 C2orf54Q08AI8 447 aa9□□□□□ -0.97
VPS11-206ENST00000614944 CCDC58Q4VC31 144 aa9□□□□□ -0.97
VPS11-206ENST00000614944 SCARA5Q6ZMJ2 495 aa9□□□□□ -0.97
VPS11-206ENST00000614944 MREGQ8N565 214 aa9□□□□□ -0.97
VPS11-206ENST00000614944 FEZF2Q8TBJ5 459 aa9□□□□□ -0.97
VPS11-206ENST00000614944 RMDN1Q96DB5 314 aa9□□□□□ -0.97
VPS11-206ENST00000614944 METTL2AQ96IZ6 378 aaKnown RBP9□□□□□ -0.97
VPS11-206ENST00000614944 HEXIM2Q96MH2 286 aaKnown RBP9□□□□□ -0.97
VPS11-206ENST00000614944 MRPL1Q9BYD6 325 aaKnown RBP9□□□□□ -0.97
VPS11-206ENST00000614944 CNOT10Q9H9A5 744 aaKnown RBP9□□□□□ -0.97
VPS11-206ENST00000614944 IL23AQ9NPF7 189 aa9□□□□□ -0.97
VPS11-206ENST00000614944 CCDC160A6NGH7 325 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 OR6C75A6NL08 312 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 A8MXQ7 604 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 MCF2LO15068 1137 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 PSTPIP1O43586 416 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 OPHN1O60890 802 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 PROSCO94903 275 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 AMHP03971 560 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 PTPN1P18031 435 aaKnown RBP8.99□□□□□ -0.97
VPS11-206ENST00000614944 TNFRSF8P28908 595 aa8.99□□□□□ -0.97
VPS11-206ENST00000614944 PTGS2P35354 604 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 238.5 ms