RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 STK38LQ9Y2H1 464 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 SAMD9Q5K651 1589 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 BECN2A8MW95 431 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 H7C1D1 291 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 GPR171O14626 319 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 SYN3O14994 580 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 CPNE3O75131 537 aaKnown RBP3.1□□□□□ -1.91
CBWD3-209ENST00000614377 IPO13O94829 963 aaKnown RBP3.1□□□□□ -1.91
CBWD3-209ENST00000614377 TJP3O95049 919 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 ASS1P00966 412 aaKnown RBP3.1□□□□□ -1.91
CBWD3-209ENST00000614377 LRG1P02750 347 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 MYL6BP14649 208 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 ZNF12P17014 697 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 GALP22466 123 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 GLRA2P23416 452 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 STX2P32856 288 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 IL13P35225 146 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 BMI1P35226 326 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 SPAM1P38567 509 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 SLC9A3P48764 834 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 ARHGDIAP52565 204 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 CACNA2D1P54289 1103 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 C17orf67Q0P5P2 114 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 COASYQ13057 564 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 CAMK2DQ13557 499 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 ARHGAP19Q14CB8 494 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 FLYWCH1Q4VC44 716 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 FBXO47Q5MNV8 452 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 FBXL19Q6PCT2 694 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 SHQ1Q6PI26 577 aaKnown RBP3.1□□□□□ -1.91
CBWD3-209ENST00000614377 DARS2Q6PI48 645 aaKnown RBP3.1□□□□□ -1.91
CBWD3-209ENST00000614377 FOXR2Q6PJQ5 311 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 KLHL24Q6TFL4 600 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 CACNA2D4Q7Z3S7 1137 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 R3HCC1LQ7Z5L2 792 aaKnown RBP3.1□□□□□ -1.91
CBWD3-209ENST00000614377 CPLX4Q7Z7G2 160 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 PRUNE1Q86TP1 453 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 RALGPS2Q86X27 583 aaPredicted RBP3.1□□□□□ -1.91
CBWD3-209ENST00000614377 DCP2Q8IU60 420 aaKnown RBP3.1□□□□□ -1.91
CBWD3-209ENST00000614377 VSTM4Q8IW00 320 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 CCDC28AQ8IWP9 274 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.1□□□□□ -1.91
CBWD3-209ENST00000614377 KIAA2013Q8IYS2 634 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 ELMOD2Q8IZ81 293 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 ALLCQ8N6M5 410 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 ANKRD13CQ8N6S4 541 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 CELF5Q8N6W0 485 aaKnown RBP3.1□□□□□ -1.91
CBWD3-209ENST00000614377 EFHBQ8N7U6 833 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 TMEM102Q8N9M5 508 aaPredicted RBP3.1□□□□□ -1.91
CBWD3-209ENST00000614377 FSIP1Q8NA03 581 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 FAM13CQ8NE31 585 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 SRFBP1Q8NEF9 429 aaKnown RBP3.1□□□□□ -1.91
CBWD3-209ENST00000614377 OR52N1Q8NH53 320 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 SCFD2Q8WU76 684 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 RASSF5Q8WWW0 418 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 METTL21AQ8WXB1 218 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 GATAD2BQ8WXI9 593 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 NKD2Q969F2 451 aaPredicted RBP3.1□□□□□ -1.91
CBWD3-209ENST00000614377 L3MBTL2Q969R5 705 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 LRRC39Q96DD0 335 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 IQCDQ96DY2 449 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 MAP6Q96JE9 813 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 FAR2Q96K12 515 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 CAMK1GQ96NX5 476 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 PNKPQ96T60 521 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 GON7Q9BXV9 100 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 FRMD8Q9BZ67 464 aaPredicted RBP3.1□□□□□ -1.91
CBWD3-209ENST00000614377 REXO4Q9GZR2 422 aaKnown RBP3.1□□□□□ -1.91
CBWD3-209ENST00000614377 MARCH7Q9H992 704 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 CERS4Q9HA82 394 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 SIAEQ9HAT2 523 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 RPRD1BQ9NQG5 326 aaKnown RBP3.1□□□□□ -1.91
CBWD3-209ENST00000614377 PRDM6Q9NQX0 595 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 ZDHHC3Q9NYG2 299 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 SELENONQ9NZV5 590 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 UXTQ9UBK9 157 aaPredicted RBP3.1□□□□□ -1.91
CBWD3-209ENST00000614377 MORF4L1Q9UBU8 362 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 CPSF3Q9UKF6 684 aaKnown RBP3.1□□□□□ -1.91
CBWD3-209ENST00000614377 SLC39A10Q9ULF5 831 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 POLIQ9UNA4 740 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 AURKCQ9UQB9 309 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 COQ6Q9Y2Z9 468 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 RIPK3Q9Y572 518 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 PCDHA3Q9Y5H8 950 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 SNX14Q9Y5W7 946 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 NPHP4O75161 1426 aaPredicted RBP3.1□□□□□ -1.91
CBWD3-209ENST00000614377 FRMPD4Q14CM0 1322 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 MYBBP1AQ9BQG0 1328 aaKnown RBP3.1□□□□□ -1.91
CBWD3-209ENST00000614377 ARID1BQ8NFD5 2236 aaPredicted RBP3.1□□□□□ -1.91
CBWD3-209ENST00000614377 TAF1LQ8IZX4 1826 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 EFCAB10A6NFE3 127 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 ZNF233A6NK53 670 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 NT5C1B-RDH14C9J2C7 533 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 PSMD11O00231 422 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 NEMP1O14524 444 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 SCAMP1O15126 338 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 ACOX3O15254 700 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 KCNN4O15554 427 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 HCRTR2O43614 444 aa3.1□□□□□ -1.91
CBWD3-209ENST00000614377 ZNF862O60290 1169 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms