RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 C2orf27AQ580R0 203 aa13.21□□□□□ -0.29
CCL4-201ENST00000613947 FSCBQ5H9T9 825 aa13.21□□□□□ -0.29
CCL4-201ENST00000613947 EFHC2Q5JST6 749 aa13.21□□□□□ -0.29
CCL4-201ENST00000613947 PKN3Q6P5Z2 889 aa13.21□□□□□ -0.29
CCL4-201ENST00000613947 RHOT2Q8IXI1 618 aa13.21□□□□□ -0.29
CCL4-201ENST00000613947 NIPA2Q8N8Q9 360 aa13.21□□□□□ -0.29
CCL4-201ENST00000613947 RFFLQ8WZ73 363 aa13.21□□□□□ -0.29
CCL4-201ENST00000613947 ZDHHC4Q9NPG8 344 aa13.21□□□□□ -0.29
CCL4-201ENST00000613947 ABCB8Q9NUT2 735 aa13.21□□□□□ -0.29
CCL4-201ENST00000613947 MPP6Q9NZW5 540 aa13.21□□□□□ -0.29
CCL4-201ENST00000613947 USP18Q9UMW8 372 aa13.21□□□□□ -0.29
CCL4-201ENST00000613947 IGLV3-10A0A075B6K4 115 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 A0A1B0GVM2 712 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 TCAF2A6NFQ2 919 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 ANKRD65E5RJM6 399 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 H0Y626 953 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 PRPSAP2O60256 369 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 LUC7L3O95232 432 aaKnown RBP13.2□□□□□ -0.3
CCL4-201ENST00000613947 IPO7O95373 1038 aaKnown RBP13.2□□□□□ -0.3
CCL4-201ENST00000613947 IL1R2P27930 398 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 KIR2DL1P43626 348 aaPredicted RBP13.2□□□□□ -0.3
CCL4-201ENST00000613947 AIF1P55008 147 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 CDH18Q13634 790 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 TTC39BQ5VTQ0 682 aaPredicted RBP13.2□□□□□ -0.3
CCL4-201ENST00000613947 TMEM215Q68D42 235 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 NUDT18Q6ZVK8 323 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 CYP4V2Q6ZWL3 525 aaPredicted RBP13.2□□□□□ -0.3
CCL4-201ENST00000613947 ANKS1BQ7Z6G8 1248 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 CPNE8Q86YQ8 564 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 DTWD2Q8NBA8 298 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 LMLNQ96KR4 655 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 GPATCH2LQ9NWQ4 482 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 C2orf42Q9NWW7 574 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 HCN2Q9UL51 889 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 DOCK4Q8N1I0 1966 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 RCCD1A6NED2 376 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 CLDN11O75508 207 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 MTA2O94776 668 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 LRIG2O94898 1065 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 PROSCO94903 275 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 NRG1Q02297 640 aaPredicted RBP13.2□□□□□ -0.3
CCL4-201ENST00000613947 LMAN2Q12907 356 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 ERMARDQ5T6L9 678 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 MANEALQ5VSG8 457 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 KDM7AQ6ZMT4 941 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 KIAA0907Q7Z7F0 614 aaPredicted RBP13.2□□□□□ -0.3
CCL4-201ENST00000613947 TAX1BP1Q86VP1 789 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 CCDC117Q8IWD4 279 aaPredicted RBP13.2□□□□□ -0.3
CCL4-201ENST00000613947 OTUD6BQ8N6M0 293 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.2□□□□□ -0.3
CCL4-201ENST00000613947 GPATCH11Q8N954 259 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 RPLP0P6Q8NHW5 317 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 MAGEC3Q8TD91 643 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 USP33Q8TEY7 942 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 LUC7LQ9NQ29 371 aaKnown RBP13.2□□□□□ -0.3
CCL4-201ENST00000613947 POLR3BQ9NW08 1133 aaPredicted RBP13.2□□□□□ -0.3
CCL4-201ENST00000613947 STARD13Q9Y3M8 1113 aa13.2□□□□□ -0.3
CCL4-201ENST00000613947 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.19□□□□□ -0.3
CCL4-201ENST00000613947 PABPC1P11940 636 aaKnown RBP13.19□□□□□ -0.3
CCL4-201ENST00000613947 L1CAMP32004 1257 aa13.19□□□□□ -0.3
CCL4-201ENST00000613947 TIE1P35590 1138 aa13.19□□□□□ -0.3
CCL4-201ENST00000613947 CDH4P55283 916 aa13.19□□□□□ -0.3
CCL4-201ENST00000613947 ZNF177Q13360 481 aaPredicted RBP13.19□□□□□ -0.3
CCL4-201ENST00000613947 MESDQ14696 234 aa13.19□□□□□ -0.3
CCL4-201ENST00000613947 TCEAL1Q15170 157 aa13.19□□□□□ -0.3
CCL4-201ENST00000613947 CA9Q16790 459 aa13.19□□□□□ -0.3
CCL4-201ENST00000613947 KCNT1Q5JUK3 1230 aa13.19□□□□□ -0.3
CCL4-201ENST00000613947 TXNRD3NBQ6F5E7 133 aa13.19□□□□□ -0.3
CCL4-201ENST00000613947 CXorf57Q6NSI4 855 aaKnown RBP13.19□□□□□ -0.3
CCL4-201ENST00000613947 RWDD4Q6NW29 188 aaKnown RBP13.19□□□□□ -0.3
CCL4-201ENST00000613947 CHST9Q7L1S5 443 aa13.19□□□□□ -0.3
CCL4-201ENST00000613947 TFAP2DQ7Z6R9 452 aa13.19□□□□□ -0.3
CCL4-201ENST00000613947 ADIPOR2Q86V24 386 aa13.19□□□□□ -0.3
CCL4-201ENST00000613947 SPEM1Q8N4L4 309 aa13.19□□□□□ -0.3
CCL4-201ENST00000613947 MREGQ8N565 214 aa13.19□□□□□ -0.3
CCL4-201ENST00000613947 ZNF557Q8N988 423 aaPredicted RBP13.19□□□□□ -0.3
CCL4-201ENST00000613947 TRIM58Q8NG06 486 aa13.19□□□□□ -0.3
CCL4-201ENST00000613947 SORCS1Q8WY21 1168 aa13.19□□□□□ -0.3
CCL4-201ENST00000613947 SNRNP25Q9BV90 132 aaKnown RBP13.19□□□□□ -0.3
CCL4-201ENST00000613947 ZYG11BQ9C0D3 744 aa13.19□□□□□ -0.3
CCL4-201ENST00000613947 DHX35Q9H5Z1 703 aaKnown RBP13.19□□□□□ -0.3
CCL4-201ENST00000613947 ZWILCHQ9H900 591 aa13.19□□□□□ -0.3
CCL4-201ENST00000613947 SPATA6Q9NWH7 488 aaPredicted RBP13.19□□□□□ -0.3
CCL4-201ENST00000613947 ELOVL2Q9NXB9 296 aa13.19□□□□□ -0.3
CCL4-201ENST00000613947 PPARGC1AQ9UBK2 798 aaKnown RBP13.19□□□□□ -0.3
CCL4-201ENST00000613947 RNF14Q9UBS8 474 aa13.19□□□□□ -0.3
CCL4-201ENST00000613947 INTS6Q9UL03 887 aaKnown RBP13.19□□□□□ -0.3
CCL4-201ENST00000613947 SNX12Q9UMY4 172 aa13.19□□□□□ -0.3
CCL4-201ENST00000613947 AP4E1Q9UPM8 1137 aa13.19□□□□□ -0.3
CCL4-201ENST00000613947 NEU3Q9UQ49 428 aa13.19□□□□□ -0.3
CCL4-201ENST00000613947 KMT2EQ8IZD2 1858 aa13.18□□□□□ -0.3
CCL4-201ENST00000613947 TMEM110-MUSTN1A8MSY1 372 aa13.18□□□□□ -0.3
CCL4-201ENST00000613947 CREB3O43889 395 aa13.18□□□□□ -0.3
CCL4-201ENST00000613947 MYBL2P10244 700 aa13.18□□□□□ -0.3
CCL4-201ENST00000613947 TCP1P17987 556 aaKnown RBP13.18□□□□□ -0.3
CCL4-201ENST00000613947 SSR1P43307 286 aaKnown RBP13.18□□□□□ -0.3
CCL4-201ENST00000613947 NUMBP49757 651 aa13.18□□□□□ -0.3
CCL4-201ENST00000613947 MRPS21P82921 87 aaKnown RBP13.18□□□□□ -0.3
CCL4-201ENST00000613947 SLC25A11Q02978 314 aaKnown RBP13.18□□□□□ -0.3
CCL4-201ENST00000613947 SEMA3BQ13214 749 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms