RNA–Protein interactions for RNA: ENST00000613916.1

PVT1-222, Transcript of Pvt1 oncogene, human

Gene PVT1, Length 137 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-222	ENST00000613916	HPCAL4	Q9UM19	191 aa		7.53	□□□□□ -1.2
PVT1-222	ENST00000613916	RAD54B	Q9Y620	910 aa		7.53	□□□□□ -1.2
PVT1-222	ENST00000613916	CHD6	Q8TD26	2715 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	TCRBV7S3A2	A0A539	114 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	AGPS	O00116	658 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	GFRA2	O00451	464 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	PER2	O15055	1255 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	FGF10	O15520	208 aa	Predicted RBP	7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	CNTN5	O94779	1100 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	PAPLN	O95428	1278 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	MBL2	P11226	248 aa	Predicted RBP	7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	RHOQ	P17081	205 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	GJA1	P17302	382 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	TACR2	P21452	398 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	HOXA9	P31269	272 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	GARS	P41250	739 aa	Known RBP	7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	MAGEA6	P43360	314 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	TNNT3	P45378	269 aa	Predicted RBP	7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	COG7	P83436	770 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	CAV1	Q03135	178 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	GAD2	Q05329	585 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	DHX9	Q08211	1270 aa	Known RBP	7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	CALCOCO2	Q13137	446 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	KCNC3	Q14003	757 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	KCNJ11	Q14654	390 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	MORF4L2	Q15014	288 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	PABPC1L	Q4VXU2	614 aa	Known RBP	7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	PPM1L	Q5SGD2	360 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	STXBP5	Q5T5C0	1151 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	ANKRD22	Q5VYY1	191 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	RWDD4	Q6NW29	188 aa	Known RBP	7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	POTEH	Q6S545	545 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916		Q6ZNB5	142 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	ARHGAP36	Q6ZRI8	547 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	BZW1	Q7L1Q6	419 aa	Known RBP	7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	DGLUCY	Q7Z3D6	616 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	TADA2B	Q86TJ2	420 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	DENND1C	Q8IV53	801 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	UBALD2	Q8IYN6	164 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	IQCK	Q8N0W5	287 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	ARL14EP	Q8N8R7	260 aa	Predicted RBP	7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	RTL3	Q8N8U3	475 aa	Known RBP	7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	NAT8L	Q8N9F0	302 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	BBOF1	Q8ND07	529 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	SHKBP1	Q8TBC3	707 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	CCDC110	Q8TBZ0	833 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	CCHCR1	Q8TD31	782 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	MICAL1	Q8TDZ2	1067 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	DEPDC1B	Q8WUY9	529 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	HTR3C	Q8WXA8	447 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	ZNF707	Q96C28	371 aa	Predicted RBP	7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	TCEAL4	Q96EI5	215 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	P2RY11	Q96G91	374 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	CELF6	Q96J87	481 aa	Known RBP	7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	TSGA13	Q96PP4	275 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	CORO1B	Q9BR76	489 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	SLC39A8	Q9C0K1	460 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	CATSPERB	Q9H7T0	1116 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	VIPAS39	Q9H9C1	493 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	TMEM248	Q9NWD8	314 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	DNMT3B	Q9UBC3	853 aa	Known RBP	7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	SLC12A6	Q9UHW9	1150 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	STOML2	Q9UJZ1	356 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	TPX2	Q9ULW0	747 aa	Known RBP	7.52	□□□□□ -1.21
PVT1-222	ENST00000613916	KIAA1549L	Q6ZVL6	1849 aa		7.52	□□□□□ -1.21
PVT1-222	ENST00000613916		A0A0A0MRY4	1105 aa		7.51	□□□□□ -1.21
PVT1-222	ENST00000613916		A0A1W2PRU2	124 aa		7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	RNF103	O00237	685 aa		7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	PPP1R12A	O14974	1030 aa	Predicted RBP	7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	NCAM2	O15394	837 aa		7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	MAFK	O60675	156 aa		7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	TMEM63A	O94886	807 aa		7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	METTL18	O95568	372 aa		7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	POU2F2	P09086	479 aa		7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	IRF1	P10914	325 aa		7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	MYL4	P12829	197 aa		7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	PTPN2	P17706	415 aa		7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	HDC	P19113	662 aa		7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	PTPN3	P26045	913 aa		7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	CDC25C	P30307	473 aa		7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	CORO1A	P31146	461 aa	Known RBP	7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	SERPINB6	P35237	376 aa		7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	HSD17B3	P37058	310 aa		7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	NRIP1	P48552	1158 aa		7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	SGSH	P51688	502 aa		7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	SLC7A9	P82251	487 aa		7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	ZNF33A	Q06730	810 aa		7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	AP1B1	Q10567	949 aa		7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	CBLB	Q13191	982 aa		7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	MTA1	Q13330	715 aa		7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	SLC5A9	Q2M3M2	681 aa		7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	ANKRD20A2	Q5SQ80	823 aa		7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	ACBD5	Q5T8D3	534 aa	Predicted RBP	7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	ANKRD20A1	Q5TYW2	823 aa		7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	ANKRD20A3	Q5VUR7	823 aa		7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	HEATR6	Q6AI08	1181 aa	Known RBP	7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	ASTL	Q6HA08	431 aa	Predicted RBP	7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	RFWD3	Q6PCD5	774 aa		7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	PDZD4	Q76G19	769 aa	Predicted RBP	7.51	□□□□□ -1.21
PVT1-222	ENST00000613916	CHSY1	Q86X52	802 aa		7.51	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms