RNA–Protein interactions for RNA: ENST00000613721.4

TUBD1-216, Transcript of tubulin delta 1, humanhuman

TSL 5 BASIC

Gene TUBD1, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-216ENST00000613721 SNX15Q9NRS6 342 aa12.22□□□□□ -0.45
TUBD1-216ENST00000613721 TMEM216Q9P0N5 145 aa12.22□□□□□ -0.45
TUBD1-216ENST00000613721 COPG2Q9UBF2 871 aa12.22□□□□□ -0.45
TUBD1-216ENST00000613721 TRHDEQ9UKU6 1024 aa12.22□□□□□ -0.45
TUBD1-216ENST00000613721 TRPV2Q9Y5S1 764 aa12.22□□□□□ -0.45
TUBD1-216ENST00000613721 HHLA1C9JL84 531 aa12.21□□□□□ -0.45
TUBD1-216ENST00000613721 SEPT4O43236 478 aa12.21□□□□□ -0.45
TUBD1-216ENST00000613721 MGEA5O60502 916 aa12.21□□□□□ -0.45
TUBD1-216ENST00000613721 MAGEC1O60732 1142 aa12.21□□□□□ -0.45
TUBD1-216ENST00000613721 USP1O94782 785 aa12.21□□□□□ -0.45
TUBD1-216ENST00000613721 LUC7L3O95232 432 aaKnown RBP12.21□□□□□ -0.45
TUBD1-216ENST00000613721 PRKCGP05129 697 aa12.21□□□□□ -0.45
TUBD1-216ENST00000613721 NFKB1P19838 968 aa12.21□□□□□ -0.45
TUBD1-216ENST00000613721 PCSK1P29120 753 aa12.21□□□□□ -0.45
TUBD1-216ENST00000613721 CD68P34810 354 aaPredicted RBP12.21□□□□□ -0.45
TUBD1-216ENST00000613721 THPOP40225 353 aa12.21□□□□□ -0.45
TUBD1-216ENST00000613721 KDSRQ06136 332 aa12.21□□□□□ -0.45
TUBD1-216ENST00000613721 GALNT2Q10471 571 aa12.21□□□□□ -0.45
TUBD1-216ENST00000613721 ZBTB17Q13105 803 aa12.21□□□□□ -0.45
TUBD1-216ENST00000613721 RCN1Q15293 331 aa12.21□□□□□ -0.45
TUBD1-216ENST00000613721 CCDC6Q16204 474 aa12.21□□□□□ -0.45
TUBD1-216ENST00000613721 KCTD11Q693B1 232 aa12.21□□□□□ -0.45
TUBD1-216ENST00000613721 STRA8Q7Z7C7 330 aa12.21□□□□□ -0.45
TUBD1-216ENST00000613721 CMC1Q7Z7K0 106 aa12.21□□□□□ -0.45
TUBD1-216ENST00000613721 C10orf107Q8IVU9 208 aa12.21□□□□□ -0.45
TUBD1-216ENST00000613721 DCLK2Q8N568 766 aa12.21□□□□□ -0.45
TUBD1-216ENST00000613721 RBM15BQ8NDT2 890 aaKnown RBP12.21□□□□□ -0.45
TUBD1-216ENST00000613721 EDEM1Q92611 657 aa12.21□□□□□ -0.45
TUBD1-216ENST00000613721 ISL2Q96A47 359 aa12.21□□□□□ -0.45
TUBD1-216ENST00000613721 VAT1Q99536 393 aa12.21□□□□□ -0.45
TUBD1-216ENST00000613721 PAAF1Q9BRP4 392 aa12.21□□□□□ -0.45
TUBD1-216ENST00000613721 TKTL2Q9H0I9 626 aa12.21□□□□□ -0.45
TUBD1-216ENST00000613721 FAM96AQ9H5X1 160 aa12.21□□□□□ -0.45
TUBD1-216ENST00000613721 WDCPQ9H6R7 721 aa12.21□□□□□ -0.45
TUBD1-216ENST00000613721 SORCS3Q9UPU3 1222 aa12.21□□□□□ -0.45
TUBD1-216ENST00000613721 LRRC42Q9Y546 428 aa12.21□□□□□ -0.45
TUBD1-216ENST00000613721 ZCWPW2A0A1B0GU75 182 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 CASTOR2A6NHX0 329 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 PRR5-ARHGAP8B1AHC4 643 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 MAGEA12P43365 314 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 CXCR3P49682 368 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 SCNN1GP51170 649 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 RAP1GDS1P52306 607 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 ARHGAP8P85298 464 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 UBAP2LQ14157 1087 aaKnown RBP12.2□□□□□ -0.46
TUBD1-216ENST00000613721 FRG1Q14331 258 aaKnown RBP12.2□□□□□ -0.46
TUBD1-216ENST00000613721 CCDC153Q494R4 210 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 DNAL1Q4LDG9 190 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 ANKRD20A4Q4UJ75 823 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 BHLHA9Q7RTU4 235 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 WDR60Q8WVS4 1066 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 MYLPFQ96A32 169 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 ATXN7L3BQ96GX2 97 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 FAM161BQ96MY7 647 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 MLPHQ9BV36 600 aaPredicted RBP12.2□□□□□ -0.46
TUBD1-216ENST00000613721 RHOBTB2Q9BYZ6 727 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 OR12D3Q9UGF7 316 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 COL4A4P53420 1690 aaPredicted RBP12.2□□□□□ -0.46
TUBD1-216ENST00000613721 ARL5CA6NH57 179 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 ARHGAP42A6NI28 874 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 ATP9BO43861 1147 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 KRT36O76013 467 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 LRIG2O94898 1065 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 PSMG1O95456 288 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 RALBP11234 206 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 CD52P31358 61 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 SESN3P58005 492 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 SP3Q02447 781 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 TUBB3Q13509 450 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 TSNAXIP1Q2TAA8 658 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 KIRREL3Q8IZU9 778 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 FBXO27Q8NI29 283 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 IRGQQ8WZA9 623 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 CHST12Q9NRB3 414 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 APOBEC2Q9Y235 224 aaKnown RBP12.2□□□□□ -0.46
TUBD1-216ENST00000613721 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.2□□□□□ -0.46
TUBD1-216ENST00000613721 SNX10Q9Y5X0 201 aa12.2□□□□□ -0.46
TUBD1-216ENST00000613721 TDRD15B5MCY1 1934 aaKnown RBP12.2□□□□□ -0.46
TUBD1-216ENST00000613721 LAMA2P24043 3122 aaKnown RBP12.2□□□□□ -0.46
TUBD1-216ENST00000613721 E2F8A0AVK6 867 aa12.19□□□□□ -0.46
TUBD1-216ENST00000613721 ODC1P11926 461 aa12.19□□□□□ -0.46
TUBD1-216ENST00000613721 CPA3P15088 417 aa12.19□□□□□ -0.46
TUBD1-216ENST00000613721 AOC1P19801 751 aa12.19□□□□□ -0.46
TUBD1-216ENST00000613721 NPY2RP49146 381 aa12.19□□□□□ -0.46
TUBD1-216ENST00000613721 CDK7P50613 346 aa12.19□□□□□ -0.46
TUBD1-216ENST00000613721 MXRA7P84157 204 aa12.19□□□□□ -0.46
TUBD1-216ENST00000613721 PAN2Q504Q3 1202 aaKnown RBP12.19□□□□□ -0.46
TUBD1-216ENST00000613721 HSP90AA5PQ58FG0 334 aa12.19□□□□□ -0.46
TUBD1-216ENST00000613721 CERCAMQ5T4B2 595 aa12.19□□□□□ -0.46
TUBD1-216ENST00000613721 FSTL4Q6MZW2 842 aa12.19□□□□□ -0.46
TUBD1-216ENST00000613721 RSPH3Q86UC2 560 aa12.19□□□□□ -0.46
TUBD1-216ENST00000613721 TAC4Q86UU9 113 aa12.19□□□□□ -0.46
TUBD1-216ENST00000613721 KCNMB4Q86W47 210 aa12.19□□□□□ -0.46
TUBD1-216ENST00000613721 MFSD3Q96ES6 412 aa12.19□□□□□ -0.46
TUBD1-216ENST00000613721 TEKT5Q96M29 485 aa12.19□□□□□ -0.46
TUBD1-216ENST00000613721 AGAP2Q99490 1192 aa12.19□□□□□ -0.46
TUBD1-216ENST00000613721 SORT1Q99523 831 aa12.19□□□□□ -0.46
TUBD1-216ENST00000613721 APOL2Q9BQE5 337 aa12.19□□□□□ -0.46
TUBD1-216ENST00000613721 SENP6Q9GZR1 1112 aaPredicted RBP12.19□□□□□ -0.46
TUBD1-216ENST00000613721 IL22Q9GZX6 179 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms