RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 SORBS2O94875 1100 aaKnown RBP16.86■□□□□ 0.29
CNOT3-208ENST00000613073 PEX2P28328 305 aa16.86■□□□□ 0.29
CNOT3-208ENST00000613073 GRIA1P42261 906 aa16.86■□□□□ 0.29
CNOT3-208ENST00000613073 KBTBD12Q3ZCT8 623 aa16.86■□□□□ 0.29
CNOT3-208ENST00000613073 CAND1Q86VP6 1230 aaKnown RBP16.86■□□□□ 0.29
CNOT3-208ENST00000613073 RTP3Q9BQQ7 232 aa16.86■□□□□ 0.29
CNOT3-208ENST00000613073 ANLNQ9NQW6 1124 aa16.86■□□□□ 0.29
CNOT3-208ENST00000613073 IL1RAPL1Q9NZN1 696 aa16.86■□□□□ 0.29
CNOT3-208ENST00000613073 SENP1Q9P0U3 644 aa16.86■□□□□ 0.29
CNOT3-208ENST00000613073 TDRKHQ9Y2W6 561 aaKnown RBP16.86■□□□□ 0.29
CNOT3-208ENST00000613073 MTO1Q9Y2Z2 717 aaKnown RBP16.86■□□□□ 0.29
CNOT3-208ENST00000613073 FAM72CH0Y354 149 aa16.86■□□□□ 0.29
CNOT3-208ENST00000613073 BUD23O43709 281 aaKnown RBP16.86■□□□□ 0.29
CNOT3-208ENST00000613073 ITGB1P05556 798 aa16.86■□□□□ 0.29
CNOT3-208ENST00000613073 DLDP09622 509 aaKnown RBP16.86■□□□□ 0.29
CNOT3-208ENST00000613073 ATP6V1B1P15313 513 aa16.86■□□□□ 0.29
CNOT3-208ENST00000613073 BDNFP23560 247 aa16.86■□□□□ 0.29
CNOT3-208ENST00000613073 NR2C2P49116 596 aa16.86■□□□□ 0.29
CNOT3-208ENST00000613073 DAOAP59103 153 aa16.86■□□□□ 0.29
CNOT3-208ENST00000613073 ACTR3P61158 418 aa16.86■□□□□ 0.29
CNOT3-208ENST00000613073 ASPHQ12797 758 aa16.86■□□□□ 0.29
CNOT3-208ENST00000613073 KLHL38Q2WGJ6 581 aa16.86■□□□□ 0.29
CNOT3-208ENST00000613073 MMEL1Q495T6 779 aa16.86■□□□□ 0.29
CNOT3-208ENST00000613073 FAM72AQ5TYM5 149 aa16.86■□□□□ 0.29
CNOT3-208ENST00000613073 FAM72DQ6L9T8 149 aa16.86■□□□□ 0.29
CNOT3-208ENST00000613073 DENND5BQ6ZUT9 1274 aa16.86■□□□□ 0.29
CNOT3-208ENST00000613073 MRPL10Q7Z7H8 261 aaKnown RBP16.86■□□□□ 0.29
CNOT3-208ENST00000613073 PRPF39Q86UA1 669 aaKnown RBP16.86■□□□□ 0.29
CNOT3-208ENST00000613073 FAM72BQ86X60 149 aa16.86■□□□□ 0.29
CNOT3-208ENST00000613073 NT5C3BQ969T7 300 aa16.86■□□□□ 0.29
CNOT3-208ENST00000613073 MYLPFQ96A32 169 aa16.86■□□□□ 0.29
CNOT3-208ENST00000613073 TMEM209Q96SK2 561 aa16.86■□□□□ 0.29
CNOT3-208ENST00000613073 ZNF395Q9H8N7 513 aaPredicted RBP16.86■□□□□ 0.29
CNOT3-208ENST00000613073 SEPT10Q9P0V9 454 aa16.86■□□□□ 0.29
CNOT3-208ENST00000613073 MYOCOSA0A1B0GUC4 107 aa16.85■□□□□ 0.29
CNOT3-208ENST00000613073 ZNF487B1APH4 448 aa16.85■□□□□ 0.29
CNOT3-208ENST00000613073 RAP1GDS1P52306 607 aa16.85■□□□□ 0.29
CNOT3-208ENST00000613073 ITGA7Q13683 1181 aa16.85■□□□□ 0.29
CNOT3-208ENST00000613073 SH2D4BQ5SQS7 431 aa16.85■□□□□ 0.29
CNOT3-208ENST00000613073 CCNYQ8ND76 341 aa16.85■□□□□ 0.29
CNOT3-208ENST00000613073 KLHDC9Q8NEP7 349 aa16.85■□□□□ 0.29
CNOT3-208ENST00000613073 SLC26A7Q8TE54 656 aa16.85■□□□□ 0.29
CNOT3-208ENST00000613073 DCAKDQ8WVC6 231 aa16.85■□□□□ 0.29
CNOT3-208ENST00000613073 TFB1MQ8WVM0 346 aaKnown RBP16.85■□□□□ 0.29
CNOT3-208ENST00000613073 SLC2A13Q96QE2 648 aa16.85■□□□□ 0.29
CNOT3-208ENST00000613073 PIH1D1Q9NWS0 290 aaKnown RBP16.85■□□□□ 0.29
CNOT3-208ENST00000613073 CDH9Q9ULB4 789 aa16.85■□□□□ 0.29
CNOT3-208ENST00000613073 TBC1D30Q9Y2I9 924 aa16.85■□□□□ 0.29
CNOT3-208ENST00000613073 A0A0U1RQF3 1178 aa16.85■□□□□ 0.29
CNOT3-208ENST00000613073 EPHB1P54762 984 aa16.85■□□□□ 0.29
CNOT3-208ENST00000613073 ALDH18A1P54886 795 aaKnown RBP16.85■□□□□ 0.29
CNOT3-208ENST00000613073 IFRD2Q12894 506 aaPredicted RBP16.85■□□□□ 0.29
CNOT3-208ENST00000613073 MSLNQ13421 630 aaPredicted RBP16.85■□□□□ 0.29
CNOT3-208ENST00000613073 CCSAPQ6IQ19 270 aaPredicted RBP16.85■□□□□ 0.29
CNOT3-208ENST00000613073 ADGRD1Q6QNK2 874 aa16.85■□□□□ 0.29
CNOT3-208ENST00000613073 TMPRSS6Q8IU80 811 aa16.85■□□□□ 0.29
CNOT3-208ENST00000613073 EFCAB3Q8N7B9 438 aa16.85■□□□□ 0.29
CNOT3-208ENST00000613073 HTR3CQ8WXA8 447 aa16.85■□□□□ 0.29
CNOT3-208ENST00000613073 QKIQ96PU8 341 aaKnown RBP eCLIP16.85■□□□□ 0.29
CNOT3-208ENST00000613073 YIPF2Q9BWQ6 316 aa16.85■□□□□ 0.29
CNOT3-208ENST00000613073 TMLHEQ9NVH6 421 aa16.85■□□□□ 0.29
CNOT3-208ENST00000613073 MAD1L1Q9Y6D9 718 aa16.85■□□□□ 0.29
CNOT3-208ENST00000613073 CCDC195A0A1B0GUA6 201 aa16.84■□□□□ 0.29
CNOT3-208ENST00000613073 I6L893 689 aaPredicted RBP16.84■□□□□ 0.29
CNOT3-208ENST00000613073 FAM155BO75949 473 aa16.84■□□□□ 0.29
CNOT3-208ENST00000613073 RPL9P32969 192 aaKnown RBP16.84■□□□□ 0.29
CNOT3-208ENST00000613073 ADARP55265 1226 aaKnown RBP16.84■□□□□ 0.29
CNOT3-208ENST00000613073 TRMT5Q32P41 509 aaKnown RBP16.84■□□□□ 0.29
CNOT3-208ENST00000613073 PAOXQ6QHF9 649 aa16.84■□□□□ 0.29
CNOT3-208ENST00000613073 RNF111Q6ZNA4 994 aa16.84■□□□□ 0.29
CNOT3-208ENST00000613073 NET1Q7Z628 596 aaPredicted RBP16.84■□□□□ 0.29
CNOT3-208ENST00000613073 PDSS2Q86YH6 399 aa16.84■□□□□ 0.29
CNOT3-208ENST00000613073 CTAGE3PQ8IX95 158 aa16.84■□□□□ 0.29
CNOT3-208ENST00000613073 MPP5Q8N3R9 675 aa16.84■□□□□ 0.29
CNOT3-208ENST00000613073 DDIT4Q9NX09 232 aa16.84■□□□□ 0.29
CNOT3-208ENST00000613073 ZC3H7BQ9UGR2 993 aaKnown RBP16.84■□□□□ 0.29
CNOT3-208ENST00000613073 ZNF711Q9Y462 761 aa16.84■□□□□ 0.29
CNOT3-208ENST00000613073 GCATO75600 419 aa16.84■□□□□ 0.29
CNOT3-208ENST00000613073 ZNF189O75820 626 aaPredicted RBP16.84■□□□□ 0.29
CNOT3-208ENST00000613073 ODC1P11926 461 aa16.84■□□□□ 0.29
CNOT3-208ENST00000613073 VCLP18206 1134 aa16.84■□□□□ 0.29
CNOT3-208ENST00000613073 PCSK1P29120 753 aa16.84■□□□□ 0.29
CNOT3-208ENST00000613073 PDK3Q15120 406 aa16.84■□□□□ 0.29
CNOT3-208ENST00000613073 SMARCD1Q96GM5 515 aa16.84■□□□□ 0.29
CNOT3-208ENST00000613073 SHCBP1LQ9BZQ2 653 aa16.84■□□□□ 0.29
CNOT3-208ENST00000613073 ARHGEF38Q9NXL2 777 aa16.84■□□□□ 0.29
CNOT3-208ENST00000613073 SNX10Q9Y5X0 201 aa16.84■□□□□ 0.29
CNOT3-208ENST00000613073 IKBKGQ9Y6K9 419 aa16.84■□□□□ 0.29
CNOT3-208ENST00000613073 F8W8V4 182 aa16.83■□□□□ 0.29
CNOT3-208ENST00000613073 EEF2KO00418 725 aaKnown RBP16.83■□□□□ 0.29
CNOT3-208ENST00000613073 LPXNO60711 386 aa16.83■□□□□ 0.29
CNOT3-208ENST00000613073 ZNF623O75123 536 aa16.83■□□□□ 0.29
CNOT3-208ENST00000613073 TM7SF2O76062 418 aa16.83■□□□□ 0.29
CNOT3-208ENST00000613073 SLC18A1P54219 525 aa16.83■□□□□ 0.29
CNOT3-208ENST00000613073 KRT72Q14CN4 511 aa16.83■□□□□ 0.29
CNOT3-208ENST00000613073 TRIP10Q15642 601 aa16.83■□□□□ 0.29
CNOT3-208ENST00000613073 GRAMD1BQ3KR37 738 aa16.83■□□□□ 0.29
CNOT3-208ENST00000613073 DHRS4Q9BTZ2 278 aa16.83■□□□□ 0.29
CNOT3-208ENST00000613073 MECRQ9BV79 373 aa16.83■□□□□ 0.29
CNOT3-208ENST00000613073 GRIP2Q9C0E4 1043 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms