RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 USP10Q14694 798 aaKnown RBP20.83■□□□□ 0.93
SSBP3-216ENST00000610401 LILRA2Q8N149 483 aa20.83■□□□□ 0.93
SSBP3-216ENST00000610401 METTL25Q8N6Q8 603 aa20.83■□□□□ 0.93
SSBP3-216ENST00000610401 SLC7A14Q8TBB6 771 aa20.83■□□□□ 0.93
SSBP3-216ENST00000610401 URGCPQ8TCY9 931 aa20.83■□□□□ 0.93
SSBP3-216ENST00000610401 DIS3LQ8TF46 1054 aaKnown RBP20.83■□□□□ 0.93
SSBP3-216ENST00000610401 EDEM1Q92611 657 aa20.83■□□□□ 0.93
SSBP3-216ENST00000610401 MRPL1Q9BYD6 325 aaKnown RBP20.83■□□□□ 0.93
SSBP3-216ENST00000610401 PRMT7Q9NVM4 692 aaPredicted RBP20.83■□□□□ 0.93
SSBP3-216ENST00000610401 MGAMO43451 1857 aa20.83■□□□□ 0.92
SSBP3-216ENST00000610401 C19orf81C9J6K1 198 aa20.83■□□□□ 0.92
SSBP3-216ENST00000610401 ZBTB24O43167 697 aaPredicted RBP20.83■□□□□ 0.92
SSBP3-216ENST00000610401 TPST1O60507 370 aa20.83■□□□□ 0.92
SSBP3-216ENST00000610401 PTPN1P18031 435 aaKnown RBP20.83■□□□□ 0.92
SSBP3-216ENST00000610401 POU6F1Q14863 301 aa20.83■□□□□ 0.92
SSBP3-216ENST00000610401 TBCCQ15814 346 aa20.83■□□□□ 0.92
SSBP3-216ENST00000610401 GK5Q6ZS86 529 aa20.83■□□□□ 0.92
SSBP3-216ENST00000610401 ATP6V1E2Q96A05 226 aa20.83■□□□□ 0.92
SSBP3-216ENST00000610401 RTP4Q96DX8 246 aa20.83■□□□□ 0.92
SSBP3-216ENST00000610401 SLC39A3Q9BRY0 314 aa20.83■□□□□ 0.92
SSBP3-216ENST00000610401 FOXD2O60548 495 aaPredicted RBP20.82■□□□□ 0.92
SSBP3-216ENST00000610401 GNL1P36915 607 aaPredicted RBP20.82■□□□□ 0.92
SSBP3-216ENST00000610401 TMED1Q13445 227 aa20.82■□□□□ 0.92
SSBP3-216ENST00000610401 CEACAM7Q14002 265 aa20.82■□□□□ 0.92
SSBP3-216ENST00000610401 GRM3Q14832 879 aa20.82■□□□□ 0.92
SSBP3-216ENST00000610401 PGM2L1Q6PCE3 622 aa20.82■□□□□ 0.92
SSBP3-216ENST00000610401 SLC41A1Q8IVJ1 513 aa20.82■□□□□ 0.92
SSBP3-216ENST00000610401 RAB3IL1Q8TBN0 382 aa20.82■□□□□ 0.92
SSBP3-216ENST00000610401 AFG1LQ8WV93 481 aa20.82■□□□□ 0.92
SSBP3-216ENST00000610401 NXF3Q9H4D5 531 aaKnown RBP20.82■□□□□ 0.92
SSBP3-216ENST00000610401 SEC24DO94855 1032 aaPredicted RBP20.82■□□□□ 0.92
SSBP3-216ENST00000610401 TPSB2P20231 275 aa20.82■□□□□ 0.92
SSBP3-216ENST00000610401 NMBRP28336 390 aa20.82■□□□□ 0.92
SSBP3-216ENST00000610401 GARSP41250 739 aaKnown RBP20.82■□□□□ 0.92
SSBP3-216ENST00000610401 TPSAB1Q15661 275 aa20.82■□□□□ 0.92
SSBP3-216ENST00000610401 FSCBQ5H9T9 825 aa20.82■□□□□ 0.92
SSBP3-216ENST00000610401 FAM91A1Q658Y4 838 aa20.82■□□□□ 0.92
SSBP3-216ENST00000610401 UGT2A3Q6UWM9 527 aa20.82■□□□□ 0.92
SSBP3-216ENST00000610401 LBX2Q6XYB7 198 aa20.82■□□□□ 0.92
SSBP3-216ENST00000610401 DENND6AQ8IWF6 608 aa20.82■□□□□ 0.92
SSBP3-216ENST00000610401 ZFAND2BQ8WV99 257 aa20.82■□□□□ 0.92
SSBP3-216ENST00000610401 PPWD1Q96BP3 646 aaKnown RBP20.82■□□□□ 0.92
SSBP3-216ENST00000610401 OLFM3Q96PB7 478 aa20.82■□□□□ 0.92
SSBP3-216ENST00000610401 KCNK16Q96T55 309 aa20.82■□□□□ 0.92
SSBP3-216ENST00000610401 SLC4A5Q9BY07 1137 aa20.82■□□□□ 0.92
SSBP3-216ENST00000610401 CDHR5Q9HBB8 845 aa20.82■□□□□ 0.92
SSBP3-216ENST00000610401 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.82■□□□□ 0.922e-6■■■□□ 14.9
SSBP3-216ENST00000610401 TLK1Q9UKI8 766 aa20.82■□□□□ 0.92
SSBP3-216ENST00000610401 GJD2Q9UKL4 321 aa20.82■□□□□ 0.92
SSBP3-216ENST00000610401 H3BSA7 217 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 IL1BP01584 269 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 GRK2P25098 689 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 PCSK6P29122 969 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 MTTPP55157 894 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 R3HDM1Q15032 1099 aaKnown RBP20.81■□□□□ 0.92
SSBP3-216ENST00000610401 DPYSL2Q16555 572 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 CHST13Q8NET6 341 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 SPATA22Q8NHS9 363 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 FTHL17Q9BXU8 183 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 FRMD8Q9BZ67 464 aaPredicted RBP20.81■□□□□ 0.92
SSBP3-216ENST00000610401 ILKAPQ9H0C8 392 aaPredicted RBP20.81■□□□□ 0.92
SSBP3-216ENST00000610401 CYP3A43Q9HB55 503 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 PIM2Q9P1W9 311 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 CDY2AQ9Y6F7 541 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 CDY1Q9Y6F8 540 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 MDM4O15151 490 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 TRIM13O60858 407 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 CYLC2Q14093 348 aaPredicted RBP20.81■□□□□ 0.92
SSBP3-216ENST00000610401 AAGABQ6PD74 315 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 BNC2Q6ZN30 1099 aaPredicted RBP20.81■□□□□ 0.92
SSBP3-216ENST00000610401 OTOP3Q7RTS5 596 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 KBTBD6Q86V97 674 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 KYQ8NBH2 561 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.81■□□□□ 0.92
SSBP3-216ENST00000610401 EME1Q96AY2 570 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 SLC45A3Q96JT2 553 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 MED10Q9BTT4 135 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 ACE2Q9BYF1 805 aaPredicted RBP20.81■□□□□ 0.92
SSBP3-216ENST00000610401 TRIM8Q9BZR9 551 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 SIK2Q9H0K1 926 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 CAAP1Q9H8G2 361 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 NFKBIEO00221 500 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 PFDN1O60925 122 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 JCHAINP01591 159 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 TKTP29401 623 aaKnown RBP20.81■□□□□ 0.92
SSBP3-216ENST00000610401 MPP3Q13368 585 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 LRRC8BQ6P9F7 803 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 KLHDC10Q6PID8 442 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 PIGZQ86VD9 579 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 EXT2Q93063 718 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 TMIGD2Q96BF3 282 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 ZNF512Q96ME7 567 aaPredicted RBP20.81■□□□□ 0.92
SSBP3-216ENST00000610401 SMARCAD1Q9H4L7 1026 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 CCDC167Q9P0B6 97 aa20.81■□□□□ 0.92
SSBP3-216ENST00000610401 G3V2L1 256 aa20.8■□□□□ 0.92
SSBP3-216ENST00000610401 EEF2KO00418 725 aaKnown RBP20.8■□□□□ 0.92
SSBP3-216ENST00000610401 C22orf31O95567 290 aa20.8■□□□□ 0.92
SSBP3-216ENST00000610401 TFAP2AP05549 437 aa20.8■□□□□ 0.92
SSBP3-216ENST00000610401 TFEBP19484 476 aa20.8■□□□□ 0.92
SSBP3-216ENST00000610401 SPRP35270 261 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms