RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 DRD3P35462 400 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 GABRB2P47870 512 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 CXCR3P49682 368 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 CCR5P51681 352 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 METAP1P53582 386 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 ADPRHP54922 357 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 C21orf59P57076 290 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 RNASE9P60153 205 aaKnown RBP7.84□□□□□ -1.15
CUX1-219ENST00000606749 CENPCQ03188 943 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 SCAPQ12770 1279 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 ELAVL3Q14576 367 aaKnown RBP7.84□□□□□ -1.15
CUX1-219ENST00000606749 DRAP1Q14919 205 aaPredicted RBP7.84□□□□□ -1.15
CUX1-219ENST00000606749 DLG2Q15700 870 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 DPCR1Q3MIW9 517 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 ACCSLQ4AC99 568 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 HSP90AA4PQ58FG1 418 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 PRAMEF14Q5SWL7 426 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 KLHDC7AQ5VTJ3 777 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 TBC1D3GQ6DHY5 549 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 TBC1D3CQ6IPX1 549 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 LRSAM1Q6UWE0 723 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.84□□□□□ -1.15
CUX1-219ENST00000606749 ZDHHC17Q8IUH5 632 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 FAM114A1Q8IWE2 563 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 ZNF683Q8IZ20 524 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 TBC1D3Q8IZP1 549 aaPredicted RBP7.84□□□□□ -1.15
CUX1-219ENST00000606749 TMEM35BQ8NCS4 154 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 NT5C3BQ969T7 300 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 FAM131CQ96AQ9 280 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 SKA1Q96BD8 255 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 C18orf8Q96DM3 657 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 SLC6A18Q96N87 628 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 SPAG5Q96R06 1193 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 NPY6RQ99463 290 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 SIK2Q9H0K1 926 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 KDM4CQ9H3R0 1056 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 CLSTN2Q9H4D0 955 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 WDCPQ9H6R7 721 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 SYNCQ9H7C4 482 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 ANLNQ9NQW6 1124 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 ARHGEF38Q9NXL2 777 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 RRN3Q9NYV6 651 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.84□□□□□ -1.15
CUX1-219ENST00000606749 CHMP5Q9NZZ3 219 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 SARDHQ9UL12 918 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 PPM1HQ9ULR3 514 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 TBC1D30Q9Y2I9 924 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 AKAP13Q12802 2813 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 USP24Q9UPU5 2620 aa7.84□□□□□ -1.15
CUX1-219ENST00000606749 WDFY3Q8IZQ1 3526 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 FREM2Q5SZK8 3169 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 A0A1W2PR77 199 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 GOLGA8CPA6NN73 597 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 I6L893 689 aaPredicted RBP7.83□□□□□ -1.16
CUX1-219ENST00000606749 TLR4O00206 839 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 PLK4O00444 970 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 MCF2LO15068 1137 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 LATO43561 262 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 RTN2O75298 545 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 CLDN11O75508 207 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 CNTN5O94779 1100 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 F9P00740 461 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 CD38P28907 300 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 SCNN1AP37088 669 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 GGCXP38435 758 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 GRK6P43250 576 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 CCT8P50990 548 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 CDH4P55283 916 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 IL9RQ01113 521 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 RAPGEF1Q13905 1077 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 SHBQ15464 509 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 SLC25A52Q3SY17 297 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 ALFQ53S48 1182 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 BRMS1LQ5PSV4 323 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 ARTNQ5T4W7 220 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 OTUD1Q5VV17 481 aaPredicted RBP7.83□□□□□ -1.16
CUX1-219ENST00000606749 TMPRSS7Q7RTY8 843 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 DSG4Q86SJ6 1040 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 ERICH1Q86X53 443 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 OR8D1Q8WZ84 308 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 PGAP3Q96FM1 320 aaPredicted RBP7.83□□□□□ -1.16
CUX1-219ENST00000606749 SERAC1Q96JX3 654 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 C1orf74Q96LT6 269 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 PSMB7Q99436 277 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 ELF4Q99607 663 aaPredicted RBP7.83□□□□□ -1.16
CUX1-219ENST00000606749 NAA15Q9BXJ9 866 aaKnown RBP7.83□□□□□ -1.16
CUX1-219ENST00000606749 TKTL2Q9H0I9 626 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 AASDHPPTQ9NRN7 309 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 SAMSN1Q9NSI8 373 aaKnown RBP7.83□□□□□ -1.16
CUX1-219ENST00000606749 PIGVQ9NUD9 493 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 ARHGAP20Q9P2F6 1191 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 SLC25A13Q9UJS0 675 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 VPS28Q9UK41 221 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 TPX2Q9ULW0 747 aaKnown RBP7.83□□□□□ -1.16
CUX1-219ENST00000606749 SNX10Q9Y5X0 201 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 FHOD1Q9Y613 1164 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 PLXNB3Q9ULL4 1909 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 CABIN1Q9Y6J0 2220 aa7.83□□□□□ -1.16
CUX1-219ENST00000606749 A0A0D9SEW6 157 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 DRGXA6NNA5 263 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms