RNA–Protein interactions for RNA: ENST00000604247.1

SRGAP2-209, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

Gene SRGAP2, Length 2,499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-209ENST00000604247 OR6Y1Q8NGX8 325 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 GTF3C2Q8WUA4 911 aaPredicted RBP13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 MLPHQ9BV36 600 aaPredicted RBP13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 STN1Q9H668 368 aaKnown RBP13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 DNAJC28Q9NX36 388 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 DDX43Q9NXZ2 648 aaKnown RBP13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 HTTP42858 3142 aa13.26□□□□□ -0.29
SRGAP2-209ENST00000604247 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.26□□□□□ -0.29
SRGAP2-209ENST00000604247 G3V2L1 256 aa13.26□□□□□ -0.29
SRGAP2-209ENST00000604247 CD1EP15812 388 aa13.26□□□□□ -0.29
SRGAP2-209ENST00000604247 SPRP35270 261 aaPredicted RBP13.26□□□□□ -0.29
SRGAP2-209ENST00000604247 MAGEA12P43365 314 aa13.26□□□□□ -0.29
SRGAP2-209ENST00000604247 AFF1P51825 1210 aaKnown RBP13.26□□□□□ -0.29
SRGAP2-209ENST00000604247 COPAP53621 1224 aa13.26□□□□□ -0.29
SRGAP2-209ENST00000604247 LIMK2P53671 638 aa13.26□□□□□ -0.29
SRGAP2-209ENST00000604247 AP2B1P63010 937 aa13.26□□□□□ -0.29
SRGAP2-209ENST00000604247 ADAM17P78536 824 aa13.26□□□□□ -0.29
SRGAP2-209ENST00000604247 SEMA3BQ13214 749 aa13.26□□□□□ -0.29
SRGAP2-209ENST00000604247 PCBP1Q15365 356 aaKnown RBP eCLIP13.26□□□□□ -0.29
SRGAP2-209ENST00000604247 KCTD11Q693B1 232 aa13.26□□□□□ -0.29
SRGAP2-209ENST00000604247 PYDC1Q8WXC3 89 aa13.26□□□□□ -0.29
SRGAP2-209ENST00000604247 EDEM1Q92611 657 aa13.26□□□□□ -0.29
SRGAP2-209ENST00000604247 SMOQ99835 787 aa13.26□□□□□ -0.29
SRGAP2-209ENST00000604247 DNAI2Q9GZS0 605 aa13.26□□□□□ -0.29
SRGAP2-209ENST00000604247 COG4Q9H9E3 785 aa13.26□□□□□ -0.29
SRGAP2-209ENST00000604247 CYP4F11Q9HBI6 524 aa13.26□□□□□ -0.29
SRGAP2-209ENST00000604247 CASS4Q9NQ75 786 aa13.26□□□□□ -0.29
SRGAP2-209ENST00000604247 CPSF2Q9P2I0 782 aaKnown RBP13.26□□□□□ -0.29
SRGAP2-209ENST00000604247 FBXW11Q9UKB1 542 aa13.26□□□□□ -0.29
SRGAP2-209ENST00000604247 MYBPHLA2RUH7 354 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 GABRDO14764 452 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 DCXO43602 365 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 PDE5AO76074 875 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 C2P06681 752 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 FAM200BP0CF97 657 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 ALOX15P16050 662 aaPredicted RBP13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 CYP2B6P20813 491 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 SP100P23497 879 aaPredicted RBP13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 DAOAP59103 153 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 PPIDQ08752 370 aaKnown RBP13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 MFSD10Q14728 455 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 LBRQ14739 615 aaKnown RBP13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 ZRSR2Q15696 482 aaKnown RBP13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 CCDC153Q494R4 210 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 SPRYD7Q5W111 196 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 TWF2Q6IBS0 349 aaKnown RBP13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 IZUMO2Q6UXV1 221 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 ZMIZ2Q8NF64 920 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 URGCPQ8TCY9 931 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 MAPK15Q8TD08 544 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 DDIT4Q9NX09 232 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 NDE1Q9NXR1 346 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 AP1G2O75843 785 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 LTFP02788 710 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 NFKB1P19838 968 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 SERPINB8P50452 374 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 SLC9B1Q4ZJI4 515 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 OLFML2BQ68BL8 750 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 RNF111Q6ZNA4 994 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 FRMD7Q6ZUT3 714 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 PLEKHH3Q7Z736 793 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 PCED1BQ96HM7 432 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 SLC9A7Q96T83 725 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 PPP1R12CQ9BZL4 782 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 C20orf96Q9NUD7 363 aaPredicted RBP13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 CPA4Q9UI42 421 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 PCDHB12Q9Y5F1 795 aa13.25□□□□□ -0.29
SRGAP2-209ENST00000604247 E9PBE3 544 aa13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 ZBTB14O43829 449 aa13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 KLHL41O60662 606 aa13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 HSPA4LO95757 839 aa13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 SAT1P21673 171 aa13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 NMBRP28336 390 aa13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 ITGA7Q13683 1181 aa13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 PPP2R5DQ14738 602 aa13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 TMCO4Q5TGY1 634 aa13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 RNF220Q5VTB9 566 aa13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 PDZD4Q76G19 769 aaPredicted RBP13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 KCNMB4Q86W47 210 aa13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 PHC3Q8NDX5 983 aa13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 GATA6Q92908 595 aa13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 ISL2Q96A47 359 aa13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 CCDC124Q96CT7 223 aaKnown RBP13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 SENP8Q96LD8 212 aa13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 COLEC11Q9BWP8 271 aa13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 RHOBTB2Q9BYZ6 727 aa13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 IARS2Q9NSE4 1012 aaKnown RBP13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 GNEQ9Y223 722 aaKnown RBP13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 BPTFQ12830 3046 aa13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 IQCA1LA6NCM1 817 aa13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 LRPAP1P30533 357 aa13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 CDK7P50613 346 aa13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 BEX3Q00994 111 aa13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 MPP3Q13368 585 aa13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 CCL14Q16627 93 aa13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 FAM110CQ1W6H9 321 aa13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 LRRC36Q1X8D7 754 aa13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 OR52E8Q6IFG1 317 aa13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 EPGNQ6UW88 154 aa13.24□□□□□ -0.29
SRGAP2-209ENST00000604247 CLEC14AQ86T13 490 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms