RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 RNF38Q9H0F5 515 aa22.78■■□□□ 1.24
PPFIA3-211ENST00000602848 IPO11Q9UI26 975 aaKnown RBP22.78■■□□□ 1.24
PPFIA3-211ENST00000602848 STOML2Q9UJZ1 356 aa22.78■■□□□ 1.24
PPFIA3-211ENST00000602848 TRDMT1O14717 391 aaKnown RBP22.77■■□□□ 1.24
PPFIA3-211ENST00000602848 FGF19O95750 216 aa22.77■■□□□ 1.24
PPFIA3-211ENST00000602848 BMP8BP34820 402 aa22.77■■□□□ 1.24
PPFIA3-211ENST00000602848 ZBTB17Q13105 803 aa22.77■■□□□ 1.24
PPFIA3-211ENST00000602848 LONRF1Q17RB8 773 aa22.77■■□□□ 1.24
PPFIA3-211ENST00000602848 ALFQ53S48 1182 aa22.77■■□□□ 1.24
PPFIA3-211ENST00000602848 C9orf50Q5SZB4 431 aa22.77■■□□□ 1.24
PPFIA3-211ENST00000602848 ZNF534Q76KX8 674 aa22.77■■□□□ 1.24
PPFIA3-211ENST00000602848 PDCD7Q8N8D1 485 aaKnown RBP22.77■■□□□ 1.24
PPFIA3-211ENST00000602848 DEPDC1BQ8WUY9 529 aa22.77■■□□□ 1.24
PPFIA3-211ENST00000602848 POF1BQ8WVV4 589 aa22.77■■□□□ 1.24
PPFIA3-211ENST00000602848 NAT9Q9BTE0 207 aa22.77■■□□□ 1.24
PPFIA3-211ENST00000602848 ACSS3Q9H6R3 686 aa22.77■■□□□ 1.24
PPFIA3-211ENST00000602848 NOL6Q9H6R4 1146 aaKnown RBP22.77■■□□□ 1.24
PPFIA3-211ENST00000602848 ZNF334Q9HCZ1 680 aaPredicted RBP22.77■■□□□ 1.24
PPFIA3-211ENST00000602848 NDFIP2Q9NV92 336 aa22.77■■□□□ 1.24
PPFIA3-211ENST00000602848 RANBP2P49792 3224 aaKnown RBP22.77■■□□□ 1.24
PPFIA3-211ENST00000602848 DOCK4Q8N1I0 1966 aa22.77■■□□□ 1.24
PPFIA3-211ENST00000602848 EXOC1LA0A1B0GW35 172 aa22.76■■□□□ 1.23
PPFIA3-211ENST00000602848 C2orf78A6NCI8 922 aa22.76■■□□□ 1.23
PPFIA3-211ENST00000602848 CNTN5O94779 1100 aa22.76■■□□□ 1.23
PPFIA3-211ENST00000602848 AP2A1O95782 977 aa22.76■■□□□ 1.23
PPFIA3-211ENST00000602848 C8AP07357 584 aa22.76■■□□□ 1.23
PPFIA3-211ENST00000602848 SPATA31D3P0C874 917 aa22.76■■□□□ 1.23
PPFIA3-211ENST00000602848 CDC25CP30307 473 aa22.76■■□□□ 1.23
PPFIA3-211ENST00000602848 NR1H3Q13133 447 aa22.76■■□□□ 1.23
PPFIA3-211ENST00000602848 HNRNPDQ14103 355 aaKnown RBP22.76■■□□□ 1.23
PPFIA3-211ENST00000602848 TERF2Q15554 542 aa22.76■■□□□ 1.23
PPFIA3-211ENST00000602848 FAM133BQ5BKY9 247 aaKnown RBP22.76■■□□□ 1.23
PPFIA3-211ENST00000602848 HP1BP3Q5SSJ5 553 aaPredicted RBP22.76■■□□□ 1.23
PPFIA3-211ENST00000602848 ADGRF1Q5T601 910 aa22.76■■□□□ 1.23
PPFIA3-211ENST00000602848 SPATA31D4Q6ZUB0 917 aa22.76■■□□□ 1.23
PPFIA3-211ENST00000602848 LGI2Q8N0V4 545 aa22.76■■□□□ 1.23
PPFIA3-211ENST00000602848 SH2D3CQ8N5H7 860 aa22.76■■□□□ 1.23
PPFIA3-211ENST00000602848 MRPS31Q92665 395 aaKnown RBP22.76■■□□□ 1.23
PPFIA3-211ENST00000602848 SIGLEC10Q96LC7 697 aa22.76■■□□□ 1.23
PPFIA3-211ENST00000602848 WDR83Q9BRX9 315 aaKnown RBP22.76■■□□□ 1.23
PPFIA3-211ENST00000602848 LRRC3Q9BY71 257 aa22.76■■□□□ 1.23
PPFIA3-211ENST00000602848 ALG13Q9NP73 1137 aaKnown RBP22.76■■□□□ 1.23
PPFIA3-211ENST00000602848 RABGEF1Q9UJ41 708 aa22.76■■□□□ 1.23
PPFIA3-211ENST00000602848 AAR2Q9Y312 384 aaKnown RBP22.76■■□□□ 1.23
PPFIA3-211ENST00000602848 SDR42E2A6NKP2 422 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 RASA4BC9J798 803 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 RASA4O43374 803 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 ANXA9O76027 345 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 CORO1AP31146 461 aaKnown RBP22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 CD68P34810 354 aaPredicted RBP22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 RENBPP51606 427 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 GYS2P54840 703 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 CDH4P55283 916 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 MAGOHP61326 146 aaKnown RBP22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 TNK2Q07912 1038 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 TTC39BQ5VTQ0 682 aaPredicted RBP22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 CYS1Q717R9 158 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 TAOK1Q7L7X3 1001 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 AGAP3Q96P47 875 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 FCRL5Q96RD9 977 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 EBNA1BP2Q99848 306 aaKnown RBP22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 CHMP2BQ9UQN3 213 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 NUP205Q92621 2012 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 GOLGA6L7A0A1B0GV03 622 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 RAMP2O60895 175 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 AVILO75366 819 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 CLDN11O75508 207 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 BANF1O75531 89 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 CPP00450 1065 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 MBL2P11226 248 aaPredicted RBP22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 STX2P32856 288 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 POLD3Q15054 466 aaPredicted RBP22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 SHHQ15465 462 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 PRPF38BQ5VTL8 546 aaKnown RBP22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 KCTD11Q693B1 232 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 CHRDL2Q6WN34 429 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 CHST9Q7L1S5 443 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 DENND1CQ8IV53 801 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 NSMCE1Q8WV22 266 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 GCNAQ96QF7 691 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 CYTH2Q99418 400 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 CEP41Q9BYV8 373 aa22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 CNOT10Q9H9A5 744 aaKnown RBP22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 ZC3H7BQ9UGR2 993 aaKnown RBP22.75■■□□□ 1.23
PPFIA3-211ENST00000602848 SOBPA7XYQ1 873 aa22.74■■□□□ 1.23
PPFIA3-211ENST00000602848 KLKB1P03952 638 aa22.74■■□□□ 1.23
PPFIA3-211ENST00000602848 HDCP19113 662 aa22.74■■□□□ 1.23
PPFIA3-211ENST00000602848 NFKB1P19838 968 aa22.74■■□□□ 1.23
PPFIA3-211ENST00000602848 SSTR1P30872 391 aa22.74■■□□□ 1.23
PPFIA3-211ENST00000602848 OR1E1P30953 314 aa22.74■■□□□ 1.23
PPFIA3-211ENST00000602848 SLCO1A2P46721 670 aa22.74■■□□□ 1.23
PPFIA3-211ENST00000602848 GEMIN4P57678 1058 aaKnown RBP22.74■■□□□ 1.23
PPFIA3-211ENST00000602848 PPP2R2AP63151 447 aa22.74■■□□□ 1.23
PPFIA3-211ENST00000602848 IL10RBQ08334 325 aa22.74■■□□□ 1.23
PPFIA3-211ENST00000602848 PPM1LQ5SGD2 360 aa22.74■■□□□ 1.23
PPFIA3-211ENST00000602848 SYCP2LQ5T4T6 812 aa22.74■■□□□ 1.23
PPFIA3-211ENST00000602848 ARHGAP36Q6ZRI8 547 aa22.74■■□□□ 1.23
PPFIA3-211ENST00000602848 TFAP2DQ7Z6R9 452 aa22.74■■□□□ 1.23
PPFIA3-211ENST00000602848 LINC00523Q86TU6 105 aa22.74■■□□□ 1.23
PPFIA3-211ENST00000602848 TMC8Q8IU68 726 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms