RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 C9orf64Q5T6V5 341 aa17.66■□□□□ 0.42
HERC3-214ENST00000601319 SH3PXD2AQ5TCZ1 1133 aa17.66■□□□□ 0.42
HERC3-214ENST00000601319 SLC23A3Q6PIS1 610 aa17.66■□□□□ 0.42
HERC3-214ENST00000601319 WDR59Q6PJI9 974 aa17.66■□□□□ 0.42
HERC3-214ENST00000601319 ZNF571Q7Z3V5 609 aaPredicted RBP17.66■□□□□ 0.42
HERC3-214ENST00000601319 CACUL1Q86Y37 369 aa17.66■□□□□ 0.42
HERC3-214ENST00000601319 CEP76Q8TAP6 659 aa17.66■□□□□ 0.42
HERC3-214ENST00000601319 MCEEQ96PE7 176 aa17.66■□□□□ 0.42
HERC3-214ENST00000601319 EDEM2Q9BV94 578 aa17.66■□□□□ 0.42
HERC3-214ENST00000601319 C2orf49Q9BVC5 232 aaPredicted RBP17.66■□□□□ 0.42
HERC3-214ENST00000601319 ZYG11BQ9C0D3 744 aa17.66■□□□□ 0.42
HERC3-214ENST00000601319 OSBPL2Q9H1P3 480 aa17.66■□□□□ 0.42
HERC3-214ENST00000601319 HAUS4Q9H6D7 363 aa17.66■□□□□ 0.42
HERC3-214ENST00000601319 RXFP3Q9NSD7 469 aa17.66■□□□□ 0.42
HERC3-214ENST00000601319 TMEM74BQ9NUR3 256 aa17.66■□□□□ 0.42
HERC3-214ENST00000601319 SLCO3A1Q9UIG8 710 aa17.66■□□□□ 0.42
HERC3-214ENST00000601319 SLC25A13Q9UJS0 675 aa17.66■□□□□ 0.42
HERC3-214ENST00000601319 HS3ST2Q9Y278 367 aa17.66■□□□□ 0.42
HERC3-214ENST00000601319 SNX10Q9Y5X0 201 aa17.66■□□□□ 0.42
HERC3-214ENST00000601319 PLXNA2O75051 1894 aa17.65■□□□□ 0.42
HERC3-214ENST00000601319 ATP9BO43861 1147 aa17.65■□□□□ 0.42
HERC3-214ENST00000601319 RNASEH1O60930 286 aaKnown RBP17.65■□□□□ 0.42
HERC3-214ENST00000601319 STK19P49842 368 aaPredicted RBP17.65■□□□□ 0.42
HERC3-214ENST00000601319 FOXK2Q01167 660 aa17.65■□□□□ 0.42
HERC3-214ENST00000601319 RAB6CQ53S08 254 aa17.65■□□□□ 0.42
HERC3-214ENST00000601319 SYCP2LQ5T4T6 812 aa17.65■□□□□ 0.42
HERC3-214ENST00000601319 USP30Q70CQ3 517 aa17.65■□□□□ 0.42
HERC3-214ENST00000601319 DCAF4L2Q8NA75 395 aa17.65■□□□□ 0.42
HERC3-214ENST00000601319 DNASE2BQ8WZ79 361 aa17.65■□□□□ 0.42
HERC3-214ENST00000601319 RPL10LQ96L21 214 aaKnown RBP17.65■□□□□ 0.42
HERC3-214ENST00000601319 CNPY3Q9BT09 278 aa17.65■□□□□ 0.42
HERC3-214ENST00000601319 RAB6CQ9H0N0 254 aa17.65■□□□□ 0.42
HERC3-214ENST00000601319 MUC3BQ9H195 1237 aa17.65■□□□□ 0.42
HERC3-214ENST00000601319 PABPC3Q9H361 631 aaKnown RBP17.65■□□□□ 0.42
HERC3-214ENST00000601319 MTG2Q9H4K7 406 aa17.65■□□□□ 0.42
HERC3-214ENST00000601319 TAS2R14Q9NYV8 317 aa17.65■□□□□ 0.42
HERC3-214ENST00000601319 MPP6Q9NZW5 540 aa17.65■□□□□ 0.42
HERC3-214ENST00000601319 SUSD2Q9UGT4 822 aa17.65■□□□□ 0.42
HERC3-214ENST00000601319 NEU3Q9UQ49 428 aa17.65■□□□□ 0.42
HERC3-214ENST00000601319 ATXN2Q99700 1313 aaKnown RBP17.65■□□□□ 0.42
HERC3-214ENST00000601319 ILVBLA1L0T0 632 aa17.64■□□□□ 0.41
HERC3-214ENST00000601319 PATE3B3GLJ2 98 aa17.64■□□□□ 0.41
HERC3-214ENST00000601319 DDX3XO00571 662 aaKnown RBP eCLIP17.64■□□□□ 0.41
HERC3-214ENST00000601319 CCP110O43303 1012 aa17.64■□□□□ 0.41
HERC3-214ENST00000601319 OR1E1P30953 314 aa17.64■□□□□ 0.41
HERC3-214ENST00000601319 AIF1P55008 147 aa17.64■□□□□ 0.41
HERC3-214ENST00000601319 RPL7AP62424 266 aaKnown RBP17.64■□□□□ 0.41
HERC3-214ENST00000601319 KRT83P78385 493 aa17.64■□□□□ 0.41
HERC3-214ENST00000601319 SFSWAPQ12872 951 aaKnown RBP17.64■□□□□ 0.41
HERC3-214ENST00000601319 CST6Q15828 149 aa17.64■□□□□ 0.41
HERC3-214ENST00000601319 DUOXA1Q1HG43 343 aa17.64■□□□□ 0.41
HERC3-214ENST00000601319 TRIM61Q5EBN2 209 aa17.64■□□□□ 0.41
HERC3-214ENST00000601319 WDR45BQ5MNZ6 344 aa17.64■□□□□ 0.41
HERC3-214ENST00000601319 STPG1Q5TH74 334 aa17.64■□□□□ 0.41
HERC3-214ENST00000601319 PLEKHA7Q6IQ23 1121 aa17.64■□□□□ 0.41
HERC3-214ENST00000601319 DGLUCYQ7Z3D6 616 aa17.64■□□□□ 0.41
HERC3-214ENST00000601319 TFAP2DQ7Z6R9 452 aa17.64■□□□□ 0.41
HERC3-214ENST00000601319 CCDC185Q8N715 623 aa17.64■□□□□ 0.41
HERC3-214ENST00000601319 FRS2Q8WU20 508 aa17.64■□□□□ 0.41
HERC3-214ENST00000601319 PTPRN2Q92932 1015 aa17.64■□□□□ 0.41
HERC3-214ENST00000601319 PSMB7Q99436 277 aa17.64■□□□□ 0.41
HERC3-214ENST00000601319 GPR174Q9BXC1 333 aa17.64■□□□□ 0.41
HERC3-214ENST00000601319 PARVAQ9NVD7 372 aa17.64■□□□□ 0.41
HERC3-214ENST00000601319 IFNKQ9P0W0 207 aa17.64■□□□□ 0.41
HERC3-214ENST00000601319 OR12D3Q9UGF7 316 aa17.64■□□□□ 0.41
HERC3-214ENST00000601319 BZW2Q9Y6E2 419 aaKnown RBP17.64■□□□□ 0.41
HERC3-214ENST00000601319 CXorf51AA0A1B0GTR3 108 aa17.63■□□□□ 0.41
HERC3-214ENST00000601319 ALOX15BO15296 676 aa17.63■□□□□ 0.41
HERC3-214ENST00000601319 SRGAP2O75044 1071 aa17.63■□□□□ 0.41
HERC3-214ENST00000601319 TPM3P06753 285 aa17.63■□□□□ 0.41
HERC3-214ENST00000601319 SERPINF2P08697 491 aa17.63■□□□□ 0.41
HERC3-214ENST00000601319 DESP17661 470 aa17.63■□□□□ 0.41
HERC3-214ENST00000601319 ZBED6P86452 979 aa17.63■□□□□ 0.41
HERC3-214ENST00000601319 MAMLD1Q13495 774 aa17.63■□□□□ 0.41
HERC3-214ENST00000601319 HGSNATQ68CP4 663 aa17.63■□□□□ 0.41
HERC3-214ENST00000601319 DCUN1D2Q6PH85 259 aa17.63■□□□□ 0.41
HERC3-214ENST00000601319 SH2D3CQ8N5H7 860 aa17.63■□□□□ 0.41
HERC3-214ENST00000601319 DEFB119Q8N690 84 aa17.63■□□□□ 0.41
HERC3-214ENST00000601319 TRIM11Q96F44 468 aa17.63■□□□□ 0.41
HERC3-214ENST00000601319 NUSAP1Q9BXS6 441 aaKnown RBP17.63■□□□□ 0.41
HERC3-214ENST00000601319 SGK2Q9HBY8 427 aa17.63■□□□□ 0.41
HERC3-214ENST00000601319 CAPN10Q9HC96 672 aa17.63■□□□□ 0.41
HERC3-214ENST00000601319 ADAMTS1Q9UHI8 967 aa17.63■□□□□ 0.41
HERC3-214ENST00000601319 VPS51Q9UID3 782 aa17.63■□□□□ 0.41
HERC3-214ENST00000601319 FZD4Q9ULV1 537 aa17.63■□□□□ 0.41
HERC3-214ENST00000601319 CAPN11Q9UMQ6 739 aa17.63■□□□□ 0.41
HERC3-214ENST00000601319 METTL12A8MUP2 240 aa17.62■□□□□ 0.41
HERC3-214ENST00000601319 MEI4A8MW99 385 aa17.62■□□□□ 0.41
HERC3-214ENST00000601319 RTN2O75298 545 aa17.62■□□□□ 0.41
HERC3-214ENST00000601319 ADH1BP00325 375 aa17.62■□□□□ 0.41
HERC3-214ENST00000601319 GYPCP04921 128 aa17.62■□□□□ 0.41
HERC3-214ENST00000601319 RHOQP17081 205 aa17.62■□□□□ 0.41
HERC3-214ENST00000601319 ETFBP38117 255 aa17.62■□□□□ 0.41
HERC3-214ENST00000601319 MAPKAPK2P49137 400 aa17.62■□□□□ 0.41
HERC3-214ENST00000601319 CLCN6P51797 869 aa17.62■□□□□ 0.41
HERC3-214ENST00000601319 IRX4P78413 519 aa17.62■□□□□ 0.41
HERC3-214ENST00000601319 LRSAM1Q6UWE0 723 aa17.62■□□□□ 0.41
HERC3-214ENST00000601319 SLFN11Q7Z7L1 901 aa17.62■□□□□ 0.41
HERC3-214ENST00000601319 DSG4Q86SJ6 1040 aa17.62■□□□□ 0.41
HERC3-214ENST00000601319 FNIP1Q8TF40 1166 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms