RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 TLR4O00206 839 aa18.52■□□□□ 0.56
CHMP2A-208ENST00000601220 CBX4O00257 560 aa18.52■□□□□ 0.56
CHMP2A-208ENST00000601220 HSF2BPO75031 334 aa18.52■□□□□ 0.56
CHMP2A-208ENST00000601220 GRAP2O75791 330 aa18.52■□□□□ 0.56
CHMP2A-208ENST00000601220 ERBB2P04626 1255 aa18.52■□□□□ 0.56
CHMP2A-208ENST00000601220 USP8P40818 1118 aa18.52■□□□□ 0.56
CHMP2A-208ENST00000601220 NXPH1P58417 271 aa18.52■□□□□ 0.56
CHMP2A-208ENST00000601220 RABGAP1LQ5R372 815 aa18.52■□□□□ 0.56
CHMP2A-208ENST00000601220 DHRS13Q6UX07 377 aa18.52■□□□□ 0.56
CHMP2A-208ENST00000601220 GBP6Q6ZN66 633 aa18.52■□□□□ 0.56
CHMP2A-208ENST00000601220 C11orf57Q6ZUT1 292 aaPredicted RBP18.52■□□□□ 0.56
CHMP2A-208ENST00000601220 FAM183BPQ6ZVS7 135 aa18.52■□□□□ 0.56
CHMP2A-208ENST00000601220 KANSL1Q7Z3B3 1105 aa18.52■□□□□ 0.56
CHMP2A-208ENST00000601220 SPATS2Q86XZ4 545 aaKnown RBP18.52■□□□□ 0.56
CHMP2A-208ENST00000601220 PASD1Q8IV76 773 aa18.52■□□□□ 0.56
CHMP2A-208ENST00000601220 SKA1Q96BD8 255 aa18.52■□□□□ 0.56
CHMP2A-208ENST00000601220 SERAC1Q96JX3 654 aa18.52■□□□□ 0.56
CHMP2A-208ENST00000601220 ANLNQ9NQW6 1124 aa18.52■□□□□ 0.56
CHMP2A-208ENST00000601220 AASDHPPTQ9NRN7 309 aa18.52■□□□□ 0.56
CHMP2A-208ENST00000601220 FTSJ1Q9UET6 329 aa18.52■□□□□ 0.56
CHMP2A-208ENST00000601220 TBC1D30Q9Y2I9 924 aa18.52■□□□□ 0.56
CHMP2A-208ENST00000601220 APC2O95996 2303 aa18.52■□□□□ 0.56
CHMP2A-208ENST00000601220 SYNJ2BP-COX16A0A087WUM0 186 aa18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 TBC1D3DA0A087WVF3 549 aa18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 TBC1D3IA0A087WXS9 549 aa18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 TBC1D3EA0A087X179 549 aa18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 TBC1D3KA0A087X1G2 549 aa18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 TBC1D3FA6NER0 549 aaPredicted RBP18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 TBC1D3LB9A6J9 549 aa18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 I6L893 689 aaPredicted RBP18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 PLRG1O43660 514 aaKnown RBP18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 RTN2O75298 545 aa18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 TBC1D3HP0C7X1 549 aa18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 CLCN1P35523 988 aa18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 NNMTP40261 264 aa18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 RXRGP48443 463 aa18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 OXCT1P55809 520 aa18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 CYP4F3Q08477 520 aa18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 EXOC3L4Q17RC7 722 aa18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 COL28A1Q2UY09 1125 aa18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 ARTNQ5T4W7 220 aa18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 TBC1D3GQ6DHY5 549 aa18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 TBC1D3CQ6IPX1 549 aa18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 ZNF683Q8IZ20 524 aa18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 TBC1D3Q8IZP1 549 aaPredicted RBP18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 C1orf131Q8NDD1 294 aaKnown RBP18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 ZNF397Q8NF99 534 aaPredicted RBP18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 RPRD1AQ96P16 312 aaPredicted RBP18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 KDM4CQ9H3R0 1056 aa18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 ERVMER34-1Q9H9K5 563 aa18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 GDF3Q9NR23 364 aa18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 COX16Q9P0S2 106 aa18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 VANGL2Q9ULK5 521 aa18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 PCDHGA1Q9Y5H4 931 aa18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 SMG1Q96Q15 3661 aaKnown RBP18.51■□□□□ 0.55
CHMP2A-208ENST00000601220 FOXN3O00409 490 aaPredicted RBP18.5■□□□□ 0.55
CHMP2A-208ENST00000601220 MCF2LO15068 1137 aa18.5■□□□□ 0.55
CHMP2A-208ENST00000601220 SLC7A4O43246 635 aa18.5■□□□□ 0.55
CHMP2A-208ENST00000601220 PAGE1O75459 146 aa18.5■□□□□ 0.55
CHMP2A-208ENST00000601220 EPHA8P29322 1005 aaPredicted RBP18.5■□□□□ 0.55
CHMP2A-208ENST00000601220 GGCXP38435 758 aa18.5■□□□□ 0.55
CHMP2A-208ENST00000601220 SLC6A3Q01959 620 aa18.5■□□□□ 0.55
CHMP2A-208ENST00000601220 BNIP3Q12983 259 aa18.5■□□□□ 0.55
CHMP2A-208ENST00000601220 DLG2Q15700 870 aa18.5■□□□□ 0.55
CHMP2A-208ENST00000601220 INAVAQ3KP66 663 aa18.5■□□□□ 0.55
CHMP2A-208ENST00000601220 PTPN20Q4JDL3 420 aa18.5■□□□□ 0.55
CHMP2A-208ENST00000601220 AGBL4Q5VU57 503 aa18.5■□□□□ 0.55
CHMP2A-208ENST00000601220 SFMBT2Q5VUG0 894 aa18.5■□□□□ 0.55
CHMP2A-208ENST00000601220 OR6B2Q6IFH4 312 aa18.5■□□□□ 0.55
CHMP2A-208ENST00000601220 NAPEPLDQ6IQ20 393 aa18.5■□□□□ 0.55
CHMP2A-208ENST00000601220 SLC26A9Q7LBE3 791 aa18.5■□□□□ 0.55
CHMP2A-208ENST00000601220 PDZD3Q86UT5 571 aa18.5■□□□□ 0.55
CHMP2A-208ENST00000601220 SLC47A2Q86VL8 602 aa18.5■□□□□ 0.55
CHMP2A-208ENST00000601220 MFSD2AQ8NA29 543 aa18.5■□□□□ 0.55
CHMP2A-208ENST00000601220 TSC1Q92574 1164 aa18.5■□□□□ 0.55
CHMP2A-208ENST00000601220 RNF34Q969K3 372 aa18.5■□□□□ 0.55
CHMP2A-208ENST00000601220 COL5A1P20908 1838 aaPredicted RBP18.49■□□□□ 0.55
CHMP2A-208ENST00000601220 ADAMTS20P59510 1910 aa18.49■□□□□ 0.55
CHMP2A-208ENST00000601220 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.49■□□□□ 0.55
CHMP2A-208ENST00000601220 ENC1O14682 589 aa18.49■□□□□ 0.55
CHMP2A-208ENST00000601220 YKT6O15498 198 aa18.49■□□□□ 0.55
CHMP2A-208ENST00000601220 CLDN11O75508 207 aa18.49■□□□□ 0.55
CHMP2A-208ENST00000601220 DAB1O75553 588 aa18.49■□□□□ 0.55
CHMP2A-208ENST00000601220 CNTN5O94779 1100 aa18.49■□□□□ 0.55
CHMP2A-208ENST00000601220 LDOC1O95751 146 aaPredicted RBP18.49■□□□□ 0.55
CHMP2A-208ENST00000601220 ITGAVP06756 1048 aa18.49■□□□□ 0.55
CHMP2A-208ENST00000601220 TFE3P19532 575 aaPredicted RBP18.49■□□□□ 0.55
CHMP2A-208ENST00000601220 NOS2P35228 1153 aa18.49■□□□□ 0.55
CHMP2A-208ENST00000601220 TAS2R38P59533 333 aa18.49■□□□□ 0.55
CHMP2A-208ENST00000601220 CNTN1Q12860 1018 aa18.49■□□□□ 0.55
CHMP2A-208ENST00000601220 DNAJC3Q13217 504 aa18.49■□□□□ 0.55
CHMP2A-208ENST00000601220 NME3Q13232 169 aa18.49■□□□□ 0.55
CHMP2A-208ENST00000601220 MTA1Q13330 715 aa18.49■□□□□ 0.55
CHMP2A-208ENST00000601220 ZNF177Q13360 481 aaPredicted RBP18.49■□□□□ 0.55
CHMP2A-208ENST00000601220 CCDC157Q569K6 752 aa18.49■□□□□ 0.55
CHMP2A-208ENST00000601220 TMPRSS12Q86WS5 348 aa18.49■□□□□ 0.55
CHMP2A-208ENST00000601220 TRIM69Q86WT6 500 aa18.49■□□□□ 0.55
CHMP2A-208ENST00000601220 SH2D3CQ8N5H7 860 aa18.49■□□□□ 0.55
CHMP2A-208ENST00000601220 PDCD7Q8N8D1 485 aaKnown RBP18.49■□□□□ 0.55
CHMP2A-208ENST00000601220 HNRNPLLQ8WVV9 542 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms