RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, human

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT5H-216	ENST00000599335	CPXM1	Q96SM3	734 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	SPATA16	Q9BXB7	569 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	DPP3	Q9NY33	737 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	CXXC1	Q9P0U4	656 aa	Predicted RBP	11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	RIMKLB	Q9ULI2	386 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	SPTBN2	O15020	2390 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	IGKV6-21	A0A0C4DH24	114 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	RFXAP	O00287	272 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	MAP3K6	O95382	1288 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	AMH	P03971	560 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	ATP6V1E1	P36543	226 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	KDSR	Q06136	332 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	LSAMP	Q13449	338 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	PTK6	Q13882	451 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	TFDP3	Q5H9I0	405 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	C9orf50	Q5SZB4	431 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	VSIG1	Q86XK7	387 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	SCN4B	Q8IWT1	228 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	C12orf50	Q8NA57	414 aa	Predicted RBP	11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	AUTS2	Q8WXX7	1259 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	RNF38	Q9H0F5	515 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	XYLT2	Q9H1B5	865 aa		11.57	□□□□□ -0.56
SUPT5H-216	ENST00000599335	CNOT3	O75175	753 aa	Known RBP	11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	MICAL2	O94851	1124 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	DARS	P14868	501 aa	Known RBP	11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	NDST1	P52848	882 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	PTP4A2	Q12974	167 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	MYLK3	Q32MK0	819 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	SYDE1	Q6ZW31	735 aa	Predicted RBP	11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	WDTC1	Q8N5D0	677 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	C12orf29	Q8N999	325 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	GLIS1	Q8NBF1	620 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	PGLYRP2	Q96PD5	576 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	MED10	Q9BTT4	135 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	ZNF518B	Q9C0D4	1074 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	CAAP1	Q9H8G2	361 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	ENTPD7	Q9NQZ7	604 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	SIX4	Q9UIU6	781 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	MSRA	Q9UJ68	235 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	LRCH1	Q9Y2L9	728 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	NEU2	Q9Y3R4	380 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335		M0QX08	132 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	APOL1	O14791	398 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	PRMT3	O60678	531 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	SEMA3D	O95025	777 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	AGT	P01019	485 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	ZNF3	P17036	446 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	KRT15	P19012	456 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	NCALD	P61601	193 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	DEFB103A	P81534	67 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	DPYS	Q14117	519 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	NFE2L1	Q14494	772 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	TRIM43	Q96BQ3	446 aa	Predicted RBP	11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	RMDN1	Q96DB5	314 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	ERLEC1	Q96DZ1	483 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	SHCBP1L	Q9BZQ2	653 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	KLHL4	Q9C0H6	718 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	SDCBP2	Q9H190	292 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	EPB41L4B	Q9H329	900 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	EHD1	Q9H4M9	534 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	PDZD7	Q9H5P4	517 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	TCF7L2	Q9NQB0	619 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	EXOC1L	A0A1B0GW35	172 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	FAM189A1	O60320	539 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	TTC4	O95801	387 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	CHRNA1	P02708	482 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	S100A6	P06703	90 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	CPB1	P15086	417 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	RBP5	P82980	135 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	TAP1	Q03518	808 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	PPIG	Q13427	754 aa	Known RBP eCLIP	11.56	□□□□□ -0.56	4e-7	■■□□□ 14.3
SUPT5H-216	ENST00000599335	KRT81	Q14533	505 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	ZNF268	Q14587	947 aa	Predicted RBP	11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	SLC10A6	Q3KNW5	377 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	ELMSAN1	Q6PJG2	1045 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	ZNF600	Q6ZNG1	722 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	ZBED8	Q8IZ13	594 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	RFWD2	Q8NHY2	731 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	DTX3L	Q8TDB6	740 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	MED30	Q96HR3	178 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	ELOVL4	Q9GZR5	314 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	KLHL25	Q9H0H3	589 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	ALG13	Q9NP73	1137 aa	Known RBP	11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	SLC12A6	Q9UHW9	1150 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	VANGL2	Q9ULK5	521 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	MAGED2	Q9UNF1	606 aa	Predicted RBP	11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	SQOR	Q9Y6N5	450 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335	ZSWIM8	A7E2V4	1837 aa		11.56	□□□□□ -0.56
SUPT5H-216	ENST00000599335		A0A1W2PRQ8	180 aa		11.55	□□□□□ -0.56
SUPT5H-216	ENST00000599335		F8W810	466 aa		11.55	□□□□□ -0.56
SUPT5H-216	ENST00000599335	HSMCR30	P0CW71	290 aa		11.55	□□□□□ -0.56
SUPT5H-216	ENST00000599335	MCF2	P10911	925 aa		11.55	□□□□□ -0.56
SUPT5H-216	ENST00000599335	PDGFRA	P16234	1089 aa		11.55	□□□□□ -0.56
SUPT5H-216	ENST00000599335	ADAM17	P78536	824 aa		11.55	□□□□□ -0.56
SUPT5H-216	ENST00000599335	OTUD4	Q01804	1114 aa	Known RBP	11.55	□□□□□ -0.56
SUPT5H-216	ENST00000599335	CAV1	Q03135	178 aa		11.55	□□□□□ -0.56
SUPT5H-216	ENST00000599335	RELA	Q04206	551 aa		11.55	□□□□□ -0.56
SUPT5H-216	ENST00000599335	AUH	Q13825	339 aa	Known RBP	11.55	□□□□□ -0.56
SUPT5H-216	ENST00000599335	ACOT1	Q86TX2	421 aa		11.55	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms