RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 NNMTP40261 264 aa13.41□□□□□ -0.26
USE1-207ENST00000596136 STK19P49842 368 aaPredicted RBP13.41□□□□□ -0.26
USE1-207ENST00000596136 ZNF143P52747 638 aaPredicted RBP13.41□□□□□ -0.26
USE1-207ENST00000596136 TPM4P67936 248 aa13.41□□□□□ -0.26
USE1-207ENST00000596136 ARL13BQ3SXY8 428 aa13.41□□□□□ -0.26
USE1-207ENST00000596136 WDR45BQ5MNZ6 344 aa13.41□□□□□ -0.26
USE1-207ENST00000596136 SYCP2LQ5T4T6 812 aa13.41□□□□□ -0.26
USE1-207ENST00000596136 MANEALQ5VSG8 457 aa13.41□□□□□ -0.26
USE1-207ENST00000596136 RNF219Q5W0B1 726 aaPredicted RBP13.41□□□□□ -0.26
USE1-207ENST00000596136 E4F1Q66K89 784 aaPredicted RBP13.41□□□□□ -0.26
USE1-207ENST00000596136 NTAN1Q96AB6 310 aa13.41□□□□□ -0.26
USE1-207ENST00000596136 PSMB7Q99436 277 aa13.41□□□□□ -0.26
USE1-207ENST00000596136 EDEM2Q9BV94 578 aa13.41□□□□□ -0.26
USE1-207ENST00000596136 SELENOOQ9BVL4 669 aa13.41□□□□□ -0.26
USE1-207ENST00000596136 GPR174Q9BXC1 333 aa13.41□□□□□ -0.26
USE1-207ENST00000596136 NUSAP1Q9BXS6 441 aaKnown RBP13.41□□□□□ -0.26
USE1-207ENST00000596136 HAUS4Q9H6D7 363 aa13.41□□□□□ -0.26
USE1-207ENST00000596136 SEPT11Q9NVA2 429 aaKnown RBP13.41□□□□□ -0.26
USE1-207ENST00000596136 TAS2R14Q9NYV8 317 aa13.41□□□□□ -0.26
USE1-207ENST00000596136 OR12D3Q9UGF7 316 aa13.41□□□□□ -0.26
USE1-207ENST00000596136 SLC6A14Q9UN76 642 aa13.41□□□□□ -0.26
USE1-207ENST00000596136 HS3ST2Q9Y278 367 aa13.41□□□□□ -0.26
USE1-207ENST00000596136 PCDH15Q96QU1 1955 aa13.41□□□□□ -0.26
USE1-207ENST00000596136 KNL1Q8NG31 2342 aa13.41□□□□□ -0.26
USE1-207ENST00000596136 NYNRINQ9P2P1 1898 aaKnown RBP13.4□□□□□ -0.26
USE1-207ENST00000596136 CXorf51AA0A1B0GTR3 108 aa13.4□□□□□ -0.26
USE1-207ENST00000596136 A0A1W2PQJ5 194 aa13.4□□□□□ -0.26
USE1-207ENST00000596136 ILVBLA1L0T0 632 aa13.4□□□□□ -0.26
USE1-207ENST00000596136 DCDC2BA2VCK2 349 aa13.4□□□□□ -0.26
USE1-207ENST00000596136 RNASEH1O60930 286 aaKnown RBP13.4□□□□□ -0.26
USE1-207ENST00000596136 GPD1P21695 349 aa13.4□□□□□ -0.26
USE1-207ENST00000596136 ACSL1P33121 698 aa13.4□□□□□ -0.26
USE1-207ENST00000596136 SCAPQ12770 1279 aa13.4□□□□□ -0.26
USE1-207ENST00000596136 CST6Q15828 149 aa13.4□□□□□ -0.26
USE1-207ENST00000596136 ASIC2Q16515 512 aa13.4□□□□□ -0.26
USE1-207ENST00000596136 C6orf118Q5T5N4 469 aa13.4□□□□□ -0.26
USE1-207ENST00000596136 SFMBT2Q5VUG0 894 aa13.4□□□□□ -0.26
USE1-207ENST00000596136 ZNF783Q6ZMS7 281 aa13.4□□□□□ -0.26
USE1-207ENST00000596136 ZNF571Q7Z3V5 609 aaPredicted RBP13.4□□□□□ -0.26
USE1-207ENST00000596136 C1orf216Q8TAB5 229 aa13.4□□□□□ -0.26
USE1-207ENST00000596136 FAM172AQ8WUF8 416 aa13.4□□□□□ -0.26
USE1-207ENST00000596136 ZYG11BQ9C0D3 744 aa13.4□□□□□ -0.26
USE1-207ENST00000596136 PABPC3Q9H361 631 aaKnown RBP13.4□□□□□ -0.26
USE1-207ENST00000596136 SGK2Q9HBY8 427 aa13.4□□□□□ -0.26
USE1-207ENST00000596136 TMEM9BQ9NQ34 198 aa13.4□□□□□ -0.26
USE1-207ENST00000596136 MPP6Q9NZW5 540 aa13.4□□□□□ -0.26
USE1-207ENST00000596136 SUSD2Q9UGT4 822 aa13.4□□□□□ -0.26
USE1-207ENST00000596136 ADAMTS1Q9UHI8 967 aa13.4□□□□□ -0.26
USE1-207ENST00000596136 VPS28Q9UK41 221 aa13.4□□□□□ -0.26
USE1-207ENST00000596136 PCNX2A6NKB5 2137 aa13.39□□□□□ -0.27
USE1-207ENST00000596136 C4orf47A7E2U8 309 aa13.39□□□□□ -0.27
USE1-207ENST00000596136 SRGAP2O75044 1071 aa13.39□□□□□ -0.27
USE1-207ENST00000596136 RHOCP08134 193 aa13.39□□□□□ -0.27
USE1-207ENST00000596136 RRM1P23921 792 aa13.39□□□□□ -0.27
USE1-207ENST00000596136 OR1E1P30953 314 aa13.39□□□□□ -0.27
USE1-207ENST00000596136 UBASH3AP57075 661 aa13.39□□□□□ -0.27
USE1-207ENST00000596136 RPL7AP62424 266 aaKnown RBP13.39□□□□□ -0.27
USE1-207ENST00000596136 KRT83P78385 493 aa13.39□□□□□ -0.27
USE1-207ENST00000596136 SFSWAPQ12872 951 aaKnown RBP13.39□□□□□ -0.27
USE1-207ENST00000596136 MAMLD1Q13495 774 aa13.39□□□□□ -0.27
USE1-207ENST00000596136 ELAVL3Q14576 367 aaKnown RBP13.39□□□□□ -0.27
USE1-207ENST00000596136 CDO1Q16878 200 aa13.39□□□□□ -0.27
USE1-207ENST00000596136 TTC31Q49AM3 519 aaPredicted RBP13.39□□□□□ -0.27
USE1-207ENST00000596136 DCAF12L1Q5VU92 463 aa13.39□□□□□ -0.27
USE1-207ENST00000596136 IL31Q6EBC2 164 aa13.39□□□□□ -0.27
USE1-207ENST00000596136 PLEKHA7Q6IQ23 1121 aa13.39□□□□□ -0.27
USE1-207ENST00000596136 DNAJC24Q6P3W2 148 aa13.39□□□□□ -0.27
USE1-207ENST00000596136 NLRP14Q86W24 1093 aa13.39□□□□□ -0.27
USE1-207ENST00000596136 CACUL1Q86Y37 369 aa13.39□□□□□ -0.27
USE1-207ENST00000596136 STK40Q8N2I9 435 aa13.39□□□□□ -0.27
USE1-207ENST00000596136 SH2D3CQ8N5H7 860 aa13.39□□□□□ -0.27
USE1-207ENST00000596136 DCAF4L2Q8NA75 395 aa13.39□□□□□ -0.27
USE1-207ENST00000596136 SYN2Q92777 582 aaPredicted RBP13.39□□□□□ -0.27
USE1-207ENST00000596136 FAM131CQ96AQ9 280 aa13.39□□□□□ -0.27
USE1-207ENST00000596136 IQCDQ96DY2 449 aa13.39□□□□□ -0.27
USE1-207ENST00000596136 CNPY3Q9BT09 278 aa13.39□□□□□ -0.27
USE1-207ENST00000596136 C2orf49Q9BVC5 232 aaPredicted RBP13.39□□□□□ -0.27
USE1-207ENST00000596136 BTBD1Q9H0C5 482 aa13.39□□□□□ -0.27
USE1-207ENST00000596136 VPS51Q9UID3 782 aa13.39□□□□□ -0.27
USE1-207ENST00000596136 SLC25A13Q9UJS0 675 aa13.39□□□□□ -0.27
USE1-207ENST00000596136 NEU3Q9UQ49 428 aa13.39□□□□□ -0.27
USE1-207ENST00000596136 ATXN2Q99700 1313 aaKnown RBP13.39□□□□□ -0.27
USE1-207ENST00000596136 A0A0D9SEW6 157 aa13.38□□□□□ -0.27
USE1-207ENST00000596136 FAM72CH0Y354 149 aa13.38□□□□□ -0.27
USE1-207ENST00000596136 GOLGA6L19H0YKK7 550 aa13.38□□□□□ -0.27
USE1-207ENST00000596136 DDX3XO00571 662 aaKnown RBP eCLIP13.38□□□□□ -0.27
USE1-207ENST00000596136 ALOX15BO15296 676 aa13.38□□□□□ -0.27
USE1-207ENST00000596136 MID1O15344 667 aa13.38□□□□□ -0.27
USE1-207ENST00000596136 CCP110O43303 1012 aa13.38□□□□□ -0.27
USE1-207ENST00000596136 ZMPSTE24O75844 475 aa13.38□□□□□ -0.27
USE1-207ENST00000596136 SEMA4FO95754 770 aa13.38□□□□□ -0.27
USE1-207ENST00000596136 ADH1BP00325 375 aa13.38□□□□□ -0.27
USE1-207ENST00000596136 SRCP12931 536 aa13.38□□□□□ -0.27
USE1-207ENST00000596136 VAV1P15498 845 aa13.38□□□□□ -0.27
USE1-207ENST00000596136 RHOQP17081 205 aa13.38□□□□□ -0.27
USE1-207ENST00000596136 ENGP17813 658 aa13.38□□□□□ -0.27
USE1-207ENST00000596136 C5AR1P21730 350 aa13.38□□□□□ -0.27
USE1-207ENST00000596136 SLC8A1P32418 973 aa13.38□□□□□ -0.27
USE1-207ENST00000596136 AIF1P55008 147 aa13.38□□□□□ -0.27
USE1-207ENST00000596136 KLHL30Q0D2K2 578 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms