RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 IRX4P78413 519 aa18.22■□□□□ 0.51
SHKBP1-204ENST00000594862 CST6Q15828 149 aa18.22■□□□□ 0.51
SHKBP1-204ENST00000594862 CDO1Q16878 200 aa18.22■□□□□ 0.51
SHKBP1-204ENST00000594862 CCDC14Q49A88 953 aa18.22■□□□□ 0.51
SHKBP1-204ENST00000594862 C9orf64Q5T6V5 341 aa18.22■□□□□ 0.51
SHKBP1-204ENST00000594862 ACAD10Q6JQN1 1059 aa18.22■□□□□ 0.51
SHKBP1-204ENST00000594862 IRF2BP2Q7Z5L9 587 aa18.22■□□□□ 0.51
SHKBP1-204ENST00000594862 DEFB119Q8N690 84 aa18.22■□□□□ 0.51
SHKBP1-204ENST00000594862 DCAF4L2Q8NA75 395 aa18.22■□□□□ 0.51
SHKBP1-204ENST00000594862 CENPIQ92674 756 aaPredicted RBP18.22■□□□□ 0.51
SHKBP1-204ENST00000594862 NTAN1Q96AB6 310 aa18.22■□□□□ 0.51
SHKBP1-204ENST00000594862 ALG14Q96F25 216 aa18.22■□□□□ 0.51
SHKBP1-204ENST00000594862 ZDHHC5Q9C0B5 715 aa18.22■□□□□ 0.51
SHKBP1-204ENST00000594862 CAPN10Q9HC96 672 aa18.22■□□□□ 0.51
SHKBP1-204ENST00000594862 ANLNQ9NQW6 1124 aa18.22■□□□□ 0.51
SHKBP1-204ENST00000594862 AIPL1Q9NZN9 384 aa18.22■□□□□ 0.51
SHKBP1-204ENST00000594862 CXorf51AA0A1B0GTR3 108 aa18.21■□□□□ 0.51
SHKBP1-204ENST00000594862 A0A1B0GTW7 788 aa18.21■□□□□ 0.51
SHKBP1-204ENST00000594862 FAM170AA1A519 330 aa18.21■□□□□ 0.51
SHKBP1-204ENST00000594862 ILVBLA1L0T0 632 aa18.21■□□□□ 0.51
SHKBP1-204ENST00000594862 DCDC2BA2VCK2 349 aa18.21■□□□□ 0.51
SHKBP1-204ENST00000594862 ATP9BO43861 1147 aa18.21■□□□□ 0.51
SHKBP1-204ENST00000594862 SEMA4FO95754 770 aa18.21■□□□□ 0.51
SHKBP1-204ENST00000594862 TPM3P06753 285 aa18.21■□□□□ 0.51
SHKBP1-204ENST00000594862 ENGP17813 658 aa18.21■□□□□ 0.51
SHKBP1-204ENST00000594862 C5AR1P21730 350 aa18.21■□□□□ 0.51
SHKBP1-204ENST00000594862 OR1E1P30953 314 aa18.21■□□□□ 0.51
SHKBP1-204ENST00000594862 ADRA1BP35368 520 aa18.21■□□□□ 0.51
SHKBP1-204ENST00000594862 IRAK1P51617 712 aa18.21■□□□□ 0.51
SHKBP1-204ENST00000594862 CLCN6P51797 869 aa18.21■□□□□ 0.51
SHKBP1-204ENST00000594862 AIF1P55008 147 aa18.21■□□□□ 0.51
SHKBP1-204ENST00000594862 NR1I3Q14994 352 aa18.21■□□□□ 0.51
SHKBP1-204ENST00000594862 DCAF12L1Q5VU92 463 aa18.21■□□□□ 0.51
SHKBP1-204ENST00000594862 LUZP1Q86V48 1076 aa18.21■□□□□ 0.51
SHKBP1-204ENST00000594862 JOSD2Q8TAC2 188 aa18.21■□□□□ 0.51
SHKBP1-204ENST00000594862 GANCQ8TET4 914 aa18.21■□□□□ 0.51
SHKBP1-204ENST00000594862 FAM172AQ8WUF8 416 aa18.21■□□□□ 0.51
SHKBP1-204ENST00000594862 OR8D1Q8WZ84 308 aa18.21■□□□□ 0.51
SHKBP1-204ENST00000594862 RPL10LQ96L21 214 aaKnown RBP18.21■□□□□ 0.51
SHKBP1-204ENST00000594862 OSBPL2Q9H1P3 480 aa18.21■□□□□ 0.51
SHKBP1-204ENST00000594862 SLCO3A1Q9UIG8 710 aa18.21■□□□□ 0.51
SHKBP1-204ENST00000594862 HS3ST2Q9Y278 367 aa18.21■□□□□ 0.51
SHKBP1-204ENST00000594862 OR51B4Q9Y5P0 310 aa18.21■□□□□ 0.51
SHKBP1-204ENST00000594862 A0A1W2PQJ5 194 aa18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 C4orf47A7E2U8 309 aa18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 I6L893 689 aaPredicted RBP18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 TM4SF5O14894 197 aa18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 SRGAP2O75044 1071 aa18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 CNTN5O94779 1100 aa18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 GZMAP12544 262 aa18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 RFC1P35251 1148 aaPredicted RBP18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 MAPKAPK2P49137 400 aa18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 STK19P49842 368 aaPredicted RBP18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 ZNF143P52747 638 aaPredicted RBP18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 FANCCQ00597 558 aa18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 SCAPQ12770 1279 aa18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 C15orf59Q2T9L4 293 aaPredicted RBP18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 ZSCAN23Q3MJ62 389 aa18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 ALFQ53S48 1182 aa18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 PPM1JQ5JR12 505 aa18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 FAM46CQ5VWP2 391 aa18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 RETSATQ6NUM9 610 aa18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 DCUN1D2Q6PH85 259 aa18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 FAM124AQ86V42 546 aa18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 MCOLN2Q8IZK6 566 aa18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 TRIM11Q96F44 468 aa18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 NAP1L5Q96NT1 182 aaPredicted RBP18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 OMDQ99983 421 aa18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 SYT11Q9BT88 431 aa18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 TTYH3Q9C0H2 523 aa18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 PARVAQ9NVD7 372 aa18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 FBXL12Q9NXK8 326 aa18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 OR12D3Q9UGF7 316 aa18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 ADAMTS1Q9UHI8 967 aa18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 FARP1Q9Y4F1 1045 aaPredicted RBP18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 BZW2Q9Y6E2 419 aaKnown RBP18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 CNOT1A5YKK6 2376 aaKnown RBP18.2■□□□□ 0.5
SHKBP1-204ENST00000594862 DOCK4Q8N1I0 1966 aa18.19■□□□□ 0.5
SHKBP1-204ENST00000594862 LRRC72A6NJI9 287 aa18.19■□□□□ 0.5
SHKBP1-204ENST00000594862 C1QTNF3-AMACRE9PGA6 284 aa18.19■□□□□ 0.5
SHKBP1-204ENST00000594862 ARHGAP33O14559 1287 aa18.19■□□□□ 0.5
SHKBP1-204ENST00000594862 SLC8A1P32418 973 aa18.19■□□□□ 0.5
SHKBP1-204ENST00000594862 HDAC4P56524 1084 aa18.19■□□□□ 0.5
SHKBP1-204ENST00000594862 UBASH3AP57075 661 aa18.19■□□□□ 0.5
SHKBP1-204ENST00000594862 KLHL30Q0D2K2 578 aa18.19■□□□□ 0.5
SHKBP1-204ENST00000594862 ACCSLQ4AC99 568 aa18.19■□□□□ 0.5
SHKBP1-204ENST00000594862 WDR59Q6PJI9 974 aa18.19■□□□□ 0.5
SHKBP1-204ENST00000594862 TFAP2DQ7Z6R9 452 aa18.19■□□□□ 0.5
SHKBP1-204ENST00000594862 VPS36Q86VN1 386 aa18.19■□□□□ 0.5
SHKBP1-204ENST00000594862 MMAAQ8IVH4 418 aaKnown RBP18.19■□□□□ 0.5
SHKBP1-204ENST00000594862 HDDC3Q8N4P3 179 aa18.19■□□□□ 0.5
SHKBP1-204ENST00000594862 SH2D3CQ8N5H7 860 aa18.19■□□□□ 0.5
SHKBP1-204ENST00000594862 PTPRN2Q92932 1015 aa18.19■□□□□ 0.5
SHKBP1-204ENST00000594862 MCEEQ96PE7 176 aa18.19■□□□□ 0.5
SHKBP1-204ENST00000594862 CNPY3Q9BT09 278 aa18.19■□□□□ 0.5
SHKBP1-204ENST00000594862 MTG2Q9H4K7 406 aa18.19■□□□□ 0.5
SHKBP1-204ENST00000594862 OSGEPQ9NPF4 335 aa18.19■□□□□ 0.5
SHKBP1-204ENST00000594862 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.19■□□□□ 0.5
SHKBP1-204ENST00000594862 CHD8Q9HCK8 2581 aa18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 TCRBV5S1A1TA0A578 114 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms