RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 THAP12O43422 761 aa18■□□□□ 0.47
RETREG3-212ENST00000593251 SDC3O75056 442 aa18■□□□□ 0.47
RETREG3-212ENST00000593251 IRAK1P51617 712 aa18■□□□□ 0.47
RETREG3-212ENST00000593251 STX17P56962 302 aa18■□□□□ 0.47
RETREG3-212ENST00000593251 CENPCQ03188 943 aa18■□□□□ 0.47
RETREG3-212ENST00000593251 SLC12A1Q13621 1099 aa18■□□□□ 0.47
RETREG3-212ENST00000593251 ACCSLQ4AC99 568 aa18■□□□□ 0.47
RETREG3-212ENST00000593251 CXorf57Q6NSI4 855 aaKnown RBP18■□□□□ 0.47
RETREG3-212ENST00000593251 TMEM110Q86TL2 294 aa18■□□□□ 0.47
RETREG3-212ENST00000593251 PRPF39Q86UA1 669 aaKnown RBP18■□□□□ 0.47
RETREG3-212ENST00000593251 TRIM59Q8IWR1 403 aa18■□□□□ 0.47
RETREG3-212ENST00000593251 OR52K2Q8NGK3 314 aa18■□□□□ 0.47
RETREG3-212ENST00000593251 STK32AQ8WU08 396 aa18■□□□□ 0.47
RETREG3-212ENST00000593251 TSC1Q92574 1164 aa18■□□□□ 0.47
RETREG3-212ENST00000593251 TIGD1Q96MW7 591 aa18■□□□□ 0.47
RETREG3-212ENST00000593251 SPAG5Q96R06 1193 aa18■□□□□ 0.47
RETREG3-212ENST00000593251 TRIM62Q9BVG3 475 aa18■□□□□ 0.47
RETREG3-212ENST00000593251 THAP9Q9H5L6 903 aa18■□□□□ 0.47
RETREG3-212ENST00000593251 UBE2TQ9NPD8 197 aaPredicted RBP18■□□□□ 0.47
RETREG3-212ENST00000593251 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18■□□□□ 0.47
RETREG3-212ENST00000593251 CA5BQ9Y2D0 317 aa18■□□□□ 0.47
RETREG3-212ENST00000593251 MED7O43513 233 aa17.99■□□□□ 0.47
RETREG3-212ENST00000593251 PLRG1O43660 514 aaKnown RBP17.99■□□□□ 0.47
RETREG3-212ENST00000593251 BNIP3LO60238 219 aa17.99■□□□□ 0.47
RETREG3-212ENST00000593251 AFPP02771 609 aaKnown RBP17.99■□□□□ 0.47
RETREG3-212ENST00000593251 C1SP09871 688 aa17.99■□□□□ 0.47
RETREG3-212ENST00000593251 BMP6P22004 513 aa17.99■□□□□ 0.47
RETREG3-212ENST00000593251 GNA15P30679 374 aa17.99■□□□□ 0.47
RETREG3-212ENST00000593251 GGCXP38435 758 aa17.99■□□□□ 0.47
RETREG3-212ENST00000593251 RXRGP48443 463 aa17.99■□□□□ 0.47
RETREG3-212ENST00000593251 CNTN1Q12860 1018 aa17.99■□□□□ 0.47
RETREG3-212ENST00000593251 EIF4EBP2Q13542 120 aaPredicted RBP17.99■□□□□ 0.47
RETREG3-212ENST00000593251 SFMBT2Q5VUG0 894 aa17.99■□□□□ 0.47
RETREG3-212ENST00000593251 FBXL22Q6P050 247 aa17.99■□□□□ 0.47
RETREG3-212ENST00000593251 FBXL19Q6PCT2 694 aa17.99■□□□□ 0.47
RETREG3-212ENST00000593251 GJB7Q6PEY0 223 aa17.99■□□□□ 0.47
RETREG3-212ENST00000593251 KANSL1Q7Z3B3 1105 aa17.99■□□□□ 0.47
RETREG3-212ENST00000593251 DEFB106AQ8N104 65 aa17.99■□□□□ 0.47
RETREG3-212ENST00000593251 MFSD2AQ8NA29 543 aa17.99■□□□□ 0.47
RETREG3-212ENST00000593251 OR8D1Q8WZ84 308 aa17.99■□□□□ 0.47
RETREG3-212ENST00000593251 RNF34Q969K3 372 aa17.99■□□□□ 0.47
RETREG3-212ENST00000593251 MED15Q96RN5 788 aa17.99■□□□□ 0.47
RETREG3-212ENST00000593251 ERVMER34-1Q9H9K5 563 aa17.99■□□□□ 0.47
RETREG3-212ENST00000593251 SLC12A6Q9UHW9 1150 aa17.99■□□□□ 0.47
RETREG3-212ENST00000593251 HOOK1Q9UJC3 728 aaKnown RBP17.99■□□□□ 0.47
RETREG3-212ENST00000593251 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.99■□□□□ 0.47
RETREG3-212ENST00000593251 A0A1B0GVM2 712 aa17.98■□□□□ 0.47
RETREG3-212ENST00000593251 TCAF2A6NFQ2 919 aa17.98■□□□□ 0.47
RETREG3-212ENST00000593251 BIN1O00499 593 aa17.98■□□□□ 0.47
RETREG3-212ENST00000593251 GRAP2O75791 330 aa17.98■□□□□ 0.47
RETREG3-212ENST00000593251 PRB1P04280 392 aa17.98■□□□□ 0.47
RETREG3-212ENST00000593251 EIF2S3P41091 472 aaKnown RBP17.98■□□□□ 0.47
RETREG3-212ENST00000593251 PLK1P53350 603 aa17.98■□□□□ 0.47
RETREG3-212ENST00000593251 SULT2A1Q06520 285 aa17.98■□□□□ 0.47
RETREG3-212ENST00000593251 PDCLQ13371 301 aa17.98■□□□□ 0.47
RETREG3-212ENST00000593251 DLG2Q15700 870 aa17.98■□□□□ 0.47
RETREG3-212ENST00000593251 RABGAP1LQ5R372 815 aa17.98■□□□□ 0.47
RETREG3-212ENST00000593251 AGBL4Q5VU57 503 aa17.98■□□□□ 0.47
RETREG3-212ENST00000593251 Q6ZVU0 165 aa17.98■□□□□ 0.47
RETREG3-212ENST00000593251 OXR1Q8N573 874 aa17.98■□□□□ 0.47
RETREG3-212ENST00000593251 FAM131CQ96AQ9 280 aa17.98■□□□□ 0.47
RETREG3-212ENST00000593251 ALG14Q96F25 216 aa17.98■□□□□ 0.47
RETREG3-212ENST00000593251 RPRD1AQ96P16 312 aaPredicted RBP17.98■□□□□ 0.47
RETREG3-212ENST00000593251 MYOCQ99972 504 aa17.98■□□□□ 0.47
RETREG3-212ENST00000593251 DDIT4Q9NX09 232 aa17.98■□□□□ 0.47
RETREG3-212ENST00000593251 SLC25A13Q9UJS0 675 aa17.98■□□□□ 0.47
RETREG3-212ENST00000593251 VANGL2Q9ULK5 521 aa17.98■□□□□ 0.47
RETREG3-212ENST00000593251 TPX2Q9ULW0 747 aaKnown RBP17.98■□□□□ 0.47
RETREG3-212ENST00000593251 BICDL2A1A5D9 508 aa17.97■□□□□ 0.47
RETREG3-212ENST00000593251 CDK4P11802 303 aa17.97■□□□□ 0.47
RETREG3-212ENST00000593251 ZNF18P17022 549 aa17.97■□□□□ 0.47
RETREG3-212ENST00000593251 USP8P40818 1118 aa17.97■□□□□ 0.47
RETREG3-212ENST00000593251 PPP1R2P41236 205 aa17.97■□□□□ 0.47
RETREG3-212ENST00000593251 CDK17Q00537 523 aa17.97■□□□□ 0.47
RETREG3-212ENST00000593251 STAT4Q14765 748 aa17.97■□□□□ 0.47
RETREG3-212ENST00000593251 TTC39BQ5VTQ0 682 aaPredicted RBP17.97■□□□□ 0.47
RETREG3-212ENST00000593251 DSG4Q86SJ6 1040 aa17.97■□□□□ 0.47
RETREG3-212ENST00000593251 KLK6Q92876 244 aa17.97■□□□□ 0.47
RETREG3-212ENST00000593251 CPXM1Q96SM3 734 aa17.97■□□□□ 0.47
RETREG3-212ENST00000593251 FEM1AQ9BSK4 669 aa17.97■□□□□ 0.47
RETREG3-212ENST00000593251 CRACR2AQ9BSW2 395 aa17.97■□□□□ 0.47
RETREG3-212ENST00000593251 SRRTQ9BXP5 876 aaKnown RBP17.97■□□□□ 0.47
RETREG3-212ENST00000593251 KDM4CQ9H3R0 1056 aa17.97■□□□□ 0.47
RETREG3-212ENST00000593251 CAAP1Q9H8G2 361 aa17.97■□□□□ 0.47
RETREG3-212ENST00000593251 RAI2Q9Y5P3 530 aa17.97■□□□□ 0.47
RETREG3-212ENST00000593251 BECN2A8MW95 431 aa17.96■□□□□ 0.47
RETREG3-212ENST00000593251 SLC7A4O43246 635 aa17.96■□□□□ 0.47
RETREG3-212ENST00000593251 ATP9BO43861 1147 aa17.96■□□□□ 0.47
RETREG3-212ENST00000593251 CKMT2P17540 419 aa17.96■□□□□ 0.47
RETREG3-212ENST00000593251 CCR1P32246 355 aa17.96■□□□□ 0.47
RETREG3-212ENST00000593251 APBA1Q02410 837 aa17.96■□□□□ 0.47
RETREG3-212ENST00000593251 AUHQ13825 339 aaKnown RBP17.96■□□□□ 0.47
RETREG3-212ENST00000593251 MEA1Q16626 185 aa17.96■□□□□ 0.47
RETREG3-212ENST00000593251 ARHGAP44Q17R89 818 aa17.96■□□□□ 0.47
RETREG3-212ENST00000593251 FAM46CQ5VWP2 391 aa17.96■□□□□ 0.47
RETREG3-212ENST00000593251 LRRC69Q6ZNQ3 347 aa17.96■□□□□ 0.47
RETREG3-212ENST00000593251 TRIM69Q86WT6 500 aa17.96■□□□□ 0.47
RETREG3-212ENST00000593251 PASD1Q8IV76 773 aa17.96■□□□□ 0.47
RETREG3-212ENST00000593251 WDTC1Q8N5D0 677 aa17.96■□□□□ 0.47
RETREG3-212ENST00000593251 SLC2A13Q96QE2 648 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms