RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 KIAA1958Q8N8K9 716 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 HJURPQ8NCD3 748 aaPredicted RBP9.91□□□□□ -0.82
DDX39A-220ENST00000593008 OR7D4Q8NG98 312 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 DDI1Q8WTU0 396 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 EXOC4Q96A65 974 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 AZIN2Q96A70 460 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 FAF2Q96CS3 445 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 CAPZA3Q96KX2 299 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 EPAS1Q99814 870 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 IER2Q9BTL4 223 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 C10orf88Q9H8K7 445 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 ZSCAN32Q9NX65 697 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 A0A0D9SEW6 157 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 CCDC66A2RUB6 948 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 PRR23AA6NEV1 266 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 H3BRJ5 948 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 K7ESF4 209 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 PDE2AO00408 941 aaPredicted RBP9.9□□□□□ -0.82
DDX39A-220ENST00000593008 HOXC11O43248 304 aaPredicted RBP9.9□□□□□ -0.82
DDX39A-220ENST00000593008 KAT7O95251 611 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 LATS1O95835 1130 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 MZF1P28698 734 aaPredicted RBP9.9□□□□□ -0.82
DDX39A-220ENST00000593008 HLA-FP30511 346 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 CSKP41240 450 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 CTSOP43234 321 aaPredicted RBP9.9□□□□□ -0.82
DDX39A-220ENST00000593008 ETF1P62495 437 aaKnown RBP9.9□□□□□ -0.82
DDX39A-220ENST00000593008 NRG1Q02297 640 aaPredicted RBP9.9□□□□□ -0.82
DDX39A-220ENST00000593008 LMAN2Q12907 356 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 SLC10A2Q12908 348 aaPredicted RBP9.9□□□□□ -0.82
DDX39A-220ENST00000593008 SRSF5Q13243 272 aaKnown RBP9.9□□□□□ -0.82
DDX39A-220ENST00000593008 LPAL2Q16609 132 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 GEN1Q17RS7 908 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 FUT11Q495W5 492 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 C5orf22Q49AR2 442 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 EMC10Q5UCC4 262 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 RNF43Q68DV7 783 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 MAMSTRQ6ZN01 415 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 ARHGAP12Q8IWW6 846 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 ETFBKMTQ8IXQ9 262 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 APCDD1Q8J025 514 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 PHTF2Q8N3S3 785 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 EXD1Q8NHP7 514 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 SORCS1Q8WY21 1168 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 ATG4AQ8WYN0 398 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 ZNF592Q92610 1267 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 OTUB2Q96DC9 234 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 ERLEC1Q96DZ1 483 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 TMA16Q96EY4 203 aaKnown RBP9.9□□□□□ -0.82
DDX39A-220ENST00000593008 LMLNQ96KR4 655 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 C1orf74Q96LT6 269 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 HHIPQ96QV1 700 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 OSBPL9Q96SU4 736 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 PNKPQ96T60 521 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 NAPGQ99747 312 aaPredicted RBP9.9□□□□□ -0.82
DDX39A-220ENST00000593008 ZNF670Q9BS34 389 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 ZYG11BQ9C0D3 744 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 DNAJC17Q9NVM6 304 aaKnown RBP9.9□□□□□ -0.82
DDX39A-220ENST00000593008 MARK1Q9P0L2 795 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 SLC12A6Q9UHW9 1150 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 LCMT1Q9UIC8 334 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 SNX12Q9UMY4 172 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 JRKLQ9Y4A0 524 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 PCDHGA2Q9Y5H1 932 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 KIAA1549LQ6ZVL6 1849 aa9.9□□□□□ -0.82
DDX39A-220ENST00000593008 NYNRINQ9P2P1 1898 aaKnown RBP9.89□□□□□ -0.83
DDX39A-220ENST00000593008 A0A1B0GVM2 712 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 TBC1D3BA6NDS4 549 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 TCAF2A6NFQ2 919 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 MIF4GDA9UHW6 222 aaKnown RBP9.89□□□□□ -0.83
DDX39A-220ENST00000593008 ESPNB1AK53 854 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 CEP104O60308 925 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 SNAP91O60641 907 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 CST8O60676 142 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 ATG13O75143 517 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 TULP3O75386 442 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 LUC7L3O95232 432 aaKnown RBP9.89□□□□□ -0.83
DDX39A-220ENST00000593008 LMNAP02545 664 aaKnown RBP9.89□□□□□ -0.83
DDX39A-220ENST00000593008 APODP05090 189 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 RHOQP17081 205 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 MSNP26038 577 aaKnown RBP9.89□□□□□ -0.83
DDX39A-220ENST00000593008 TIE1P35590 1138 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 NRLP54845 237 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 AIF1P55008 147 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 MTA1Q13330 715 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 SIX1Q15475 284 aaPredicted RBP9.89□□□□□ -0.83
DDX39A-220ENST00000593008 FBXO43Q4G163 708 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 MPPE1Q53F39 396 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 RABGAP1LQ5R372 815 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 TMEM215Q68D42 235 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 SLC9A4Q6AI14 798 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 LRRC31Q6UY01 552 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 PSTKQ8IV42 348 aaKnown RBP9.89□□□□□ -0.83
DDX39A-220ENST00000593008 MFN1Q8IWA4 741 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 UBL4BQ8N7F7 174 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 RTL3Q8N8U3 475 aaKnown RBP9.89□□□□□ -0.83
DDX39A-220ENST00000593008 ZBTB44Q8NCP5 570 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 NELL1Q92832 810 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 HMCESQ96FZ2 354 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 ZNF419Q96HQ0 510 aaPredicted RBP9.89□□□□□ -0.83
DDX39A-220ENST00000593008 CALR3Q96L12 384 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms