RNA–Protein interactions for RNA: ENST00000591798.5

DNMT1-225, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-225ENST00000591798 UBXN6Q9BZV1 441 aa8.88□□□□□ -0.99
DNMT1-225ENST00000591798 EPN3Q9H201 632 aa8.88□□□□□ -0.99
DNMT1-225ENST00000591798 PLSCR2Q9NRY7 297 aa8.88□□□□□ -0.99
DNMT1-225ENST00000591798 GEMIN8Q9NWZ8 242 aaKnown RBP8.88□□□□□ -0.99
DNMT1-225ENST00000591798 STIM2Q9P246 746 aa8.88□□□□□ -0.99
DNMT1-225ENST00000591798 CGNQ9P2M7 1197 aaKnown RBP8.88□□□□□ -0.99
DNMT1-225ENST00000591798 SLCO3A1Q9UIG8 710 aa8.88□□□□□ -0.99
DNMT1-225ENST00000591798 CCDC187A0A096LP49 1063 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 CPED1A4D0V7 1026 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 EME2A4GXA9 379 aaPredicted RBP8.87□□□□□ -0.99
DNMT1-225ENST00000591798 RIOK3O14730 519 aaKnown RBP8.87□□□□□ -0.99
DNMT1-225ENST00000591798 PPP6R2O75170 966 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 YEATS4O95619 227 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 ZBED1O96006 694 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 SLC5A2P31639 672 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 PDX1P52945 283 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 FOXK1P85037 733 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 ECT2LQ008S8 904 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 CNTN1Q12860 1018 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 PKP1Q13835 747 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 TGIF1Q15583 401 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 FOXD4L6Q3SYB3 417 aaPredicted RBP8.87□□□□□ -0.99
DNMT1-225ENST00000591798 FAM26FQ5R3K3 315 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 LCE2DQ5TA82 110 aaPredicted RBP8.87□□□□□ -0.99
DNMT1-225ENST00000591798 ZCCHC8Q6NZY4 707 aaKnown RBP8.87□□□□□ -0.99
DNMT1-225ENST00000591798 SHC4Q6S5L8 630 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 FOXD4L3Q6VB84 417 aaPredicted RBP8.87□□□□□ -0.99
DNMT1-225ENST00000591798 MMS22LQ6ZRQ5 1243 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 EFL1Q7Z2Z2 1120 aaKnown RBP8.87□□□□□ -0.99
DNMT1-225ENST00000591798 C14orf80Q86SX3 495 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 PIGZQ86VD9 579 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 SLC22A18ASQ8N1D0 253 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 FAM26EQ8N5C1 309 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 HJURPQ8NCD3 748 aaPredicted RBP8.87□□□□□ -0.99
DNMT1-225ENST00000591798 OR13H1Q8NG92 308 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 ZNF564Q8TBZ8 553 aaPredicted RBP8.87□□□□□ -0.99
DNMT1-225ENST00000591798 RNF139Q8WU17 664 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 NDRG1Q92597 394 aaKnown RBP8.87□□□□□ -0.99
DNMT1-225ENST00000591798 EDEM1Q92611 657 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 LIN37Q96GY3 246 aaPredicted RBP8.87□□□□□ -0.99
DNMT1-225ENST00000591798 RPL10LQ96L21 214 aaKnown RBP8.87□□□□□ -0.99
DNMT1-225ENST00000591798 PRICKLE1Q96MT3 831 aaPredicted RBP8.87□□□□□ -0.99
DNMT1-225ENST00000591798 ZNF396Q96N95 335 aaPredicted RBP8.87□□□□□ -0.99
DNMT1-225ENST00000591798 SPAG5Q96R06 1193 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 MYOCQ99972 504 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 CALN1Q9BXU9 219 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 ULBP1Q9BZM6 244 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 TNMDQ9H2S6 317 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 CYP3A43Q9HB55 503 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 APOBEC3GQ9HC16 384 aaKnown RBP8.87□□□□□ -0.99
DNMT1-225ENST00000591798 NCKIPSDQ9NZQ3 722 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 TFIP11Q9UBB9 837 aaKnown RBP8.87□□□□□ -0.99
DNMT1-225ENST00000591798 ACSL6Q9UKU0 697 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 PCDHGA7Q9Y5G6 932 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 PCDHGA4Q9Y5G9 962 aa8.87□□□□□ -0.99
DNMT1-225ENST00000591798 SPENQ96T58 3664 aaKnown RBP8.87□□□□□ -0.99
DNMT1-225ENST00000591798 BLACEA4D250 179 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 PLD2O14939 933 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 CASC3O15234 703 aaKnown RBP8.86□□□□□ -0.99
DNMT1-225ENST00000591798 SLC31A1O15431 190 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 ACSL4O60488 711 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 MOCS3O95396 460 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 F13A1P00488 732 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 HLA-DRAP01903 254 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 ZSCAN22P10073 491 aaPredicted RBP8.86□□□□□ -0.99
DNMT1-225ENST00000591798 VAV1P15498 845 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 PRLRP16471 622 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 CD58P19256 250 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 PIK3CAP42336 1068 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 SLC11A2P49281 568 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 STK19P49842 368 aaPredicted RBP8.86□□□□□ -0.99
DNMT1-225ENST00000591798 TKTL1P51854 596 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 HNRNPKP61978 463 aaKnown RBP eCLIP8.86□□□□□ -0.99
DNMT1-225ENST00000591798 RPS24P62847 133 aaKnown RBP8.86□□□□□ -0.99
DNMT1-225ENST00000591798 DLG4P78352 724 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 CDH18Q13634 790 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 CLCA4Q14CN2 919 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 IGFBP7Q16270 282 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 SKIDA1Q1XH10 827 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 ZNF542PQ5EBM4 170 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 FSCBQ5H9T9 825 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 PERM1Q5SV97 790 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 RNF219Q5W0B1 726 aaPredicted RBP8.86□□□□□ -0.99
DNMT1-225ENST00000591798 BSPRYQ5W0U4 402 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 NUGGCQ68CJ6 796 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 CRTC1Q6UUV9 634 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 SV2AQ7L0J3 742 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 ABI3BPQ7Z7G0 1075 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 PTRH1Q86Y79 214 aaKnown RBP8.86□□□□□ -0.99
DNMT1-225ENST00000591798 UNC45BQ8IWX7 931 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 CARNMT1Q8N4J0 409 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 ZNF548Q8NEK5 533 aaPredicted RBP8.86□□□□□ -0.99
DNMT1-225ENST00000591798 WDR48Q8TAF3 677 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 DHX58Q96C10 678 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 HEXIM2Q96MH2 286 aaKnown RBP8.86□□□□□ -0.99
DNMT1-225ENST00000591798 FUCA2Q9BTY2 467 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 LRRC27Q9C0I9 530 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 DNAI2Q9GZS0 605 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 PREBQ9HCU5 417 aa8.86□□□□□ -0.99
DNMT1-225ENST00000591798 FZD3Q9NPG1 666 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms