RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 ZNF683Q8IZ20 524 aa12.41□□□□□ -0.42
TPM4-212ENST00000590180 STK40Q8N2I9 435 aa12.41□□□□□ -0.42
TPM4-212ENST00000590180 CADM4Q8NFZ8 388 aa12.41□□□□□ -0.42
TPM4-212ENST00000590180 KNL1Q8NG31 2342 aa12.41□□□□□ -0.42
TPM4-212ENST00000590180 CENPIQ92674 756 aaPredicted RBP12.41□□□□□ -0.42
TPM4-212ENST00000590180 PTPRN2Q92932 1015 aa12.41□□□□□ -0.42
TPM4-212ENST00000590180 ALG14Q96F25 216 aa12.41□□□□□ -0.42
TPM4-212ENST00000590180 MCEEQ96PE7 176 aa12.41□□□□□ -0.42
TPM4-212ENST00000590180 FAM129BQ96TA1 746 aa12.41□□□□□ -0.42
TPM4-212ENST00000590180 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.41□□□□□ -0.42
TPM4-212ENST00000590180 EDEM2Q9BV94 578 aa12.41□□□□□ -0.42
TPM4-212ENST00000590180 MAGEB5Q9BZ81 275 aa12.41□□□□□ -0.42
TPM4-212ENST00000590180 ZYG11BQ9C0D3 744 aa12.41□□□□□ -0.42
TPM4-212ENST00000590180 BTBD1Q9H0C5 482 aa12.41□□□□□ -0.42
TPM4-212ENST00000590180 RSPH9Q9H1X1 276 aaPredicted RBP12.41□□□□□ -0.42
TPM4-212ENST00000590180 FBXL12Q9NXK8 326 aa12.41□□□□□ -0.42
TPM4-212ENST00000590180 SLC6A14Q9UN76 642 aa12.41□□□□□ -0.42
TPM4-212ENST00000590180 OR51B4Q9Y5P0 310 aa12.41□□□□□ -0.42
TPM4-212ENST00000590180 NUP205Q92621 2012 aa12.4□□□□□ -0.42
TPM4-212ENST00000590180 IGLV3-10A0A075B6K4 115 aa12.4□□□□□ -0.42
TPM4-212ENST00000590180 METTL12A8MUP2 240 aa12.4□□□□□ -0.42
TPM4-212ENST00000590180 IGLV3-19P01714 112 aa12.4□□□□□ -0.42
TPM4-212ENST00000590180 PLEKP08567 350 aaPredicted RBP12.4□□□□□ -0.42
TPM4-212ENST00000590180 VAV1P15498 845 aa12.4□□□□□ -0.42
TPM4-212ENST00000590180 GNSP15586 552 aa12.4□□□□□ -0.42
TPM4-212ENST00000590180 DESP17661 470 aa12.4□□□□□ -0.42
TPM4-212ENST00000590180 KCNA4P22459 653 aa12.4□□□□□ -0.42
TPM4-212ENST00000590180 SLC8A1P32418 973 aa12.4□□□□□ -0.42
TPM4-212ENST00000590180 ACSL1P33121 698 aa12.4□□□□□ -0.42
TPM4-212ENST00000590180 ZNF143P52747 638 aaPredicted RBP12.4□□□□□ -0.42
TPM4-212ENST00000590180 LIMK1P53667 647 aa12.4□□□□□ -0.42
TPM4-212ENST00000590180 ATXN3P54252 364 aaPredicted RBP12.4□□□□□ -0.42
TPM4-212ENST00000590180 HDAC4P56524 1084 aa12.4□□□□□ -0.42
TPM4-212ENST00000590180 GSCP56915 257 aaPredicted RBP12.4□□□□□ -0.42
TPM4-212ENST00000590180 RPL7AP62424 266 aaKnown RBP12.4□□□□□ -0.42
TPM4-212ENST00000590180 GFPT1Q06210 699 aaPredicted RBP12.4□□□□□ -0.42
TPM4-212ENST00000590180 ARID5BQ14865 1188 aa12.4□□□□□ -0.42
TPM4-212ENST00000590180 DLG2Q15700 870 aa12.4□□□□□ -0.42
TPM4-212ENST00000590180 UAP1L1Q3KQV9 507 aa12.4□□□□□ -0.42
TPM4-212ENST00000590180 FIGNQ5HY92 759 aa12.4□□□□□ -0.42
TPM4-212ENST00000590180 RABEPKQ7Z6M1 372 aa12.4□□□□□ -0.42
TPM4-212ENST00000590180 SLFN11Q7Z7L1 901 aa12.4□□□□□ -0.42
TPM4-212ENST00000590180 ATP11CQ8NB49 1132 aa12.4□□□□□ -0.42
TPM4-212ENST00000590180 VCPIP1Q96JH7 1222 aa12.4□□□□□ -0.42
TPM4-212ENST00000590180 OMDQ99983 421 aa12.4□□□□□ -0.42
TPM4-212ENST00000590180 SYT11Q9BT88 431 aa12.4□□□□□ -0.42
TPM4-212ENST00000590180 C2orf49Q9BVC5 232 aaPredicted RBP12.4□□□□□ -0.42
TPM4-212ENST00000590180 TTYH3Q9C0H2 523 aa12.4□□□□□ -0.42
TPM4-212ENST00000590180 OSBPL2Q9H1P3 480 aa12.4□□□□□ -0.42
TPM4-212ENST00000590180 PABPC3Q9H361 631 aaKnown RBP12.4□□□□□ -0.42
TPM4-212ENST00000590180 TMEM9BQ9NQ34 198 aa12.4□□□□□ -0.42
TPM4-212ENST00000590180 PARVAQ9NVD7 372 aa12.4□□□□□ -0.42
TPM4-212ENST00000590180 EVLQ9UI08 416 aaPredicted RBP12.4□□□□□ -0.42
TPM4-212ENST00000590180 NUMA1Q14980 2115 aa12.4□□□□□ -0.43
TPM4-212ENST00000590180 CKAP5Q14008 2032 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 A0A0D9SEW6 157 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 A0A1W2PP55 124 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 TCRBV5S1A1TA0A578 114 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 LNP1A1A4G5 178 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 FAM47DPA6NHR8 397 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 DDX3XO00571 662 aaKnown RBP eCLIP12.39□□□□□ -0.43
TPM4-212ENST00000590180 MID1O15344 667 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 CCP110O43303 1012 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 SNAP91O60641 907 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 RTN2O75298 545 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 SEMA4FO95754 770 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 MT-CO1P00395 513 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 IL1BP01584 269 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 TPM3P06753 285 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 SERPINF2P08697 491 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 GZMAP12544 262 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 HOXD12P35452 270 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 PRKCIP41743 596 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 MAPK8P45983 427 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 PSMD8P48556 350 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 MAMLD1Q13495 774 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 CST6Q15828 149 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 TDRD12Q587J7 1177 aaKnown RBP12.39□□□□□ -0.43
TPM4-212ENST00000590180 DAB2IPQ5VWQ8 1189 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 E4F1Q66K89 784 aaPredicted RBP12.39□□□□□ -0.43
TPM4-212ENST00000590180 SLC23A3Q6PIS1 610 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 DRC7Q8IY82 874 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 CCDC185Q8N715 623 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 OR7D4Q8NG98 312 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 SNX19Q92543 992 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 CNPY3Q9BT09 278 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 GTPBP2Q9BX10 602 aaKnown RBP12.39□□□□□ -0.43
TPM4-212ENST00000590180 TSPY26PQ9H489 355 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 C6orf106Q9H6K1 298 aaPredicted RBP12.39□□□□□ -0.43
TPM4-212ENST00000590180 SGK2Q9HBY8 427 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 FSCN3Q9NQT6 498 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 PPARGC1AQ9UBK2 798 aaKnown RBP12.39□□□□□ -0.43
TPM4-212ENST00000590180 SUSD2Q9UGT4 822 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 EIF2B4Q9UI10 523 aaKnown RBP12.39□□□□□ -0.43
TPM4-212ENST00000590180 SCML1Q9UN30 329 aa12.39□□□□□ -0.43
TPM4-212ENST00000590180 LUC7L2Q9Y383 392 aaKnown RBP12.39□□□□□ -0.43
TPM4-212ENST00000590180 FARP1Q9Y4F1 1045 aaPredicted RBP12.39□□□□□ -0.43
TPM4-212ENST00000590180 ITIH6Q6UXX5 1313 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 A0A1W2PQJ5 194 aa12.38□□□□□ -0.43
TPM4-212ENST00000590180 ILVBLA1L0T0 632 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms