RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 MTSS1LQ765P7 747 aa7.54□□□□□ -1.2
SMAD4-210ENST00000590061 OTOP3Q7RTS5 596 aa7.54□□□□□ -1.2
SMAD4-210ENST00000590061 RBM23Q86U06 439 aaKnown RBP7.54□□□□□ -1.2
SMAD4-210ENST00000590061 FAM131BQ86XD5 332 aa7.54□□□□□ -1.2
SMAD4-210ENST00000590061 DNAAF5Q86Y56 855 aa7.54□□□□□ -1.2
SMAD4-210ENST00000590061 MIB1Q86YT6 1006 aa7.54□□□□□ -1.2
SMAD4-210ENST00000590061 TREML1Q86YW5 311 aa7.54□□□□□ -1.2
SMAD4-210ENST00000590061 RFX6Q8HWS3 928 aa7.54□□□□□ -1.2
SMAD4-210ENST00000590061 ETFBKMTQ8IXQ9 262 aa7.54□□□□□ -1.2
SMAD4-210ENST00000590061 CMTM8Q8IZV2 173 aa7.54□□□□□ -1.2
SMAD4-210ENST00000590061 BBS5Q8N3I7 341 aa7.54□□□□□ -1.2
SMAD4-210ENST00000590061 CPXM2Q8N436 756 aa7.54□□□□□ -1.2
SMAD4-210ENST00000590061 TTC9BQ8N6N2 239 aa7.54□□□□□ -1.2
SMAD4-210ENST00000590061 CELF5Q8N6W0 485 aaKnown RBP7.54□□□□□ -1.2
SMAD4-210ENST00000590061 CCDC89Q8N998 374 aa7.54□□□□□ -1.2
SMAD4-210ENST00000590061 EIF1ADQ8N9N8 165 aaKnown RBP7.54□□□□□ -1.2
SMAD4-210ENST00000590061 C12orf50Q8NA57 414 aaPredicted RBP7.54□□□□□ -1.2
SMAD4-210ENST00000590061 SPATA4Q8NEY3 305 aa7.54□□□□□ -1.2
SMAD4-210ENST00000590061 GPR152Q8TDT2 470 aa7.54□□□□□ -1.2
SMAD4-210ENST00000590061 GDPD5Q8WTR4 605 aa7.54□□□□□ -1.2
SMAD4-210ENST00000590061 FATE1Q969F0 183 aa7.54□□□□□ -1.2
SMAD4-210ENST00000590061 ACSF2Q96CM8 615 aaPredicted RBP7.54□□□□□ -1.2
SMAD4-210ENST00000590061 FAF2Q96CS3 445 aa7.54□□□□□ -1.2
SMAD4-210ENST00000590061 PABPC5Q96DU9 382 aaKnown RBP7.54□□□□□ -1.2
SMAD4-210ENST00000590061 FCRL2Q96LA5 508 aaPredicted RBP7.54□□□□□ -1.2
SMAD4-210ENST00000590061 RNF157Q96PX1 679 aa7.54□□□□□ -1.2
SMAD4-210ENST00000590061 VAT1Q99536 393 aa7.54□□□□□ -1.2
SMAD4-210ENST00000590061 SNRNP25Q9BV90 132 aaKnown RBP7.54□□□□□ -1.2
SMAD4-210ENST00000590061 TRIM7Q9C029 511 aa7.54□□□□□ -1.2
SMAD4-210ENST00000590061 LRRC19Q9H756 370 aa7.54□□□□□ -1.2
SMAD4-210ENST00000590061 NMUR1Q9HB89 426 aa7.54□□□□□ -1.2
SMAD4-210ENST00000590061 IGSF5Q9NSI5 407 aa7.54□□□□□ -1.2
SMAD4-210ENST00000590061 TDP1Q9NUW8 608 aa7.54□□□□□ -1.2
SMAD4-210ENST00000590061 STOML2Q9UJZ1 356 aa7.54□□□□□ -1.2
SMAD4-210ENST00000590061 HPCAL4Q9UM19 191 aa7.54□□□□□ -1.2
SMAD4-210ENST00000590061 GBF1Q92538 1859 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 hCG_1818297A0A087WSY0 165 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 SYNJ2BP-COX16A0A087WUM0 186 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 A0A0U1RQJ8 604 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 TARSL2A2RTX5 802 aaKnown RBP7.53□□□□□ -1.2
SMAD4-210ENST00000590061 GOLGA6CA6NDK9 693 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 GOLGA6BA6NDN3 693 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 ZSCAN5CA6NGD5 496 aaPredicted RBP7.53□□□□□ -1.2
SMAD4-210ENST00000590061 WASH4PA8MWX3 477 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 AP3B1O00203 1094 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 ACSL4O60488 711 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 CST8O60676 142 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 LILRB5O75023 590 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 PHF2O75151 1096 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 PAGE1O75459 146 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 SOAT2O75908 522 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 ITGAVP06756 1048 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 GOLGA6DP0CG33 693 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 EPCAMP16422 314 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 CES1P23141 567 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 EPHB2P29323 1055 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 CXCR5P32302 372 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 GJC1P36383 396 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 DNA2P51530 1060 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 TAS2R40P59535 323 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 CAV1Q03135 178 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 MTMR3Q13615 1198 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 SLC12A1Q13621 1099 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 BYSLQ13895 437 aaKnown RBP7.53□□□□□ -1.2
SMAD4-210ENST00000590061 KCNC3Q14003 757 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 DPYSL3Q14195 570 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 PDGFRLQ15198 375 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 CYP1B1Q16678 543 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 ANO4Q32M45 955 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 PARP15Q460N3 678 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 MPPE1Q53F39 396 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 ZC3H12AQ5D1E8 599 aaKnown RBP7.53□□□□□ -1.2
SMAD4-210ENST00000590061 TCEAL5Q5H9L2 206 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 GPR158Q5T848 1215 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 SLC9A4Q6AI14 798 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 PSAPL1Q6NUJ1 521 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 RFX8Q6ZV50 586 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 HFE2Q6ZVN8 426 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 CHST9Q7L1S5 443 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 PCGF5Q86SE9 256 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 SETD3Q86TU7 594 aaPredicted RBP7.53□□□□□ -1.2
SMAD4-210ENST00000590061 TMC8Q8IU68 726 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 CDKL3Q8IVW4 592 aaPredicted RBP7.53□□□□□ -1.2
SMAD4-210ENST00000590061 IFT20Q8IY31 132 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 MMGT1Q8N4V1 131 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 HJURPQ8NCD3 748 aaPredicted RBP7.53□□□□□ -1.2
SMAD4-210ENST00000590061 ATRIPQ8WXE1 791 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 ALG3Q92685 438 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 KRT35Q92764 455 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 SLCO2A1Q92959 643 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 NKD2Q969F2 451 aaPredicted RBP7.53□□□□□ -1.2
SMAD4-210ENST00000590061 MAGOHBQ96A72 148 aaKnown RBP7.53□□□□□ -1.2
SMAD4-210ENST00000590061 PIWIL1Q96J94 861 aaKnown RBP7.53□□□□□ -1.2
SMAD4-210ENST00000590061 CSPG4P5Q96PW8 444 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 LRRC3Q9BY71 257 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 SLC2A11Q9BYW1 496 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 FRMD8Q9BZ67 464 aaPredicted RBP7.53□□□□□ -1.2
SMAD4-210ENST00000590061 ZYG11BQ9C0D3 744 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 CCSER2Q9H7U1 834 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 CERS4Q9HA82 394 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms