RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 C18orf8Q96DM3 657 aa17.33■□□□□ 0.36
CROCCP3-203ENST00000589964 BTBD1Q9H0C5 482 aa17.33■□□□□ 0.36
CROCCP3-203ENST00000589964 GAREM1Q9H706 876 aa17.33■□□□□ 0.36
CROCCP3-203ENST00000589964 METTL5Q9NRN9 209 aaKnown RBP17.33■□□□□ 0.36
CROCCP3-203ENST00000589964 SUSD2Q9UGT4 822 aa17.33■□□□□ 0.36
CROCCP3-203ENST00000589964 DACH1Q9UI36 760 aa17.33■□□□□ 0.36
CROCCP3-203ENST00000589964 RALYQ9UKM9 306 aaKnown RBP17.33■□□□□ 0.36
CROCCP3-203ENST00000589964 ASPMQ8IZT6 3477 aa17.32■□□□□ 0.36
CROCCP3-203ENST00000589964 DOCK9Q9BZ29 2069 aa17.32■□□□□ 0.36
CROCCP3-203ENST00000589964 EDDM13A0A1B0GTR0 161 aa17.32■□□□□ 0.36
CROCCP3-203ENST00000589964 SMAD6O43541 496 aaKnown RBP17.32■□□□□ 0.36
CROCCP3-203ENST00000589964 RTN2O75298 545 aa17.32■□□□□ 0.36
CROCCP3-203ENST00000589964 CTSLP07711 333 aa17.32■□□□□ 0.36
CROCCP3-203ENST00000589964 SRPRAP08240 638 aaKnown RBP17.32■□□□□ 0.36
CROCCP3-203ENST00000589964 SYPP08247 313 aa17.32■□□□□ 0.36
CROCCP3-203ENST00000589964 ATP1A3P13637 1013 aa17.32■□□□□ 0.36
CROCCP3-203ENST00000589964 GNSP15586 552 aa17.32■□□□□ 0.36
CROCCP3-203ENST00000589964 PLK1P53350 603 aa17.32■□□□□ 0.36
CROCCP3-203ENST00000589964 DEUP1Q05D60 604 aa17.32■□□□□ 0.36
CROCCP3-203ENST00000589964 C15orf59Q2T9L4 293 aaPredicted RBP17.32■□□□□ 0.36
CROCCP3-203ENST00000589964 C5orf22Q49AR2 442 aa17.32■□□□□ 0.36
CROCCP3-203ENST00000589964 RABGAP1LQ5R372 815 aa17.32■□□□□ 0.36
CROCCP3-203ENST00000589964 LINGO4Q6UY18 593 aa17.32■□□□□ 0.36
CROCCP3-203ENST00000589964 ERICH1Q86X53 443 aa17.32■□□□□ 0.36
CROCCP3-203ENST00000589964 OR7D4Q8NG98 312 aa17.32■□□□□ 0.36
CROCCP3-203ENST00000589964 NOX5Q96PH1 765 aa17.32■□□□□ 0.36
CROCCP3-203ENST00000589964 PDCL3Q9H2J4 239 aa17.32■□□□□ 0.36
CROCCP3-203ENST00000589964 H0Y8X5 98 aa17.31■□□□□ 0.36
CROCCP3-203ENST00000589964 CYP1A1P04798 512 aaPredicted RBP17.31■□□□□ 0.36
CROCCP3-203ENST00000589964 SLC2A3P11169 496 aa17.31■□□□□ 0.36
CROCCP3-203ENST00000589964 ZNF18P17022 549 aa17.31■□□□□ 0.36
CROCCP3-203ENST00000589964 RRM1P23921 792 aa17.31■□□□□ 0.36
CROCCP3-203ENST00000589964 ADPRHP54922 357 aa17.31■□□□□ 0.36
CROCCP3-203ENST00000589964 BPIFB4P59827 614 aa17.31■□□□□ 0.36
CROCCP3-203ENST00000589964 ATP11AP98196 1134 aa17.31■□□□□ 0.36
CROCCP3-203ENST00000589964 ZBTB16Q05516 673 aa17.31■□□□□ 0.36
CROCCP3-203ENST00000589964 RABEPKQ7Z6M1 372 aa17.31■□□□□ 0.36
CROCCP3-203ENST00000589964 SLCO6A1Q86UG4 719 aa17.31■□□□□ 0.36
CROCCP3-203ENST00000589964 DNAAF5Q86Y56 855 aa17.31■□□□□ 0.36
CROCCP3-203ENST00000589964 GATA6Q92908 595 aa17.31■□□□□ 0.36
CROCCP3-203ENST00000589964 C11orf70Q9BRQ4 267 aa17.31■□□□□ 0.36
CROCCP3-203ENST00000589964 FBRSQ9HAH7 460 aa17.31■□□□□ 0.36
CROCCP3-203ENST00000589964 TMEM63CQ9P1W3 806 aa17.31■□□□□ 0.36
CROCCP3-203ENST00000589964 VPS51Q9UID3 782 aa17.31■□□□□ 0.36
CROCCP3-203ENST00000589964 NEU3Q9UQ49 428 aa17.31■□□□□ 0.36
CROCCP3-203ENST00000589964 CA5BQ9Y2D0 317 aa17.31■□□□□ 0.36
CROCCP3-203ENST00000589964 TBC1D30Q9Y2I9 924 aa17.31■□□□□ 0.36
CROCCP3-203ENST00000589964 TP53BP1Q12888 1972 aaPredicted RBP17.31■□□□□ 0.36
CROCCP3-203ENST00000589964 TARSL2A2RTX5 802 aaKnown RBP17.3■□□□□ 0.36
CROCCP3-203ENST00000589964 LGALS16A8MUM7 142 aa17.3■□□□□ 0.36
CROCCP3-203ENST00000589964 FAM72CH0Y354 149 aa17.3■□□□□ 0.36
CROCCP3-203ENST00000589964 ATP9BO43861 1147 aa17.3■□□□□ 0.36
CROCCP3-203ENST00000589964 BNIP3LO60238 219 aa17.3■□□□□ 0.36
CROCCP3-203ENST00000589964 IL1BP01584 269 aa17.3■□□□□ 0.36
CROCCP3-203ENST00000589964 CD27P26842 260 aa17.3■□□□□ 0.36
CROCCP3-203ENST00000589964 SOX5P35711 763 aa17.3■□□□□ 0.36
CROCCP3-203ENST00000589964 CDR2Q01850 454 aa17.3■□□□□ 0.36
CROCCP3-203ENST00000589964 SHBQ15464 509 aa17.3■□□□□ 0.36
CROCCP3-203ENST00000589964 SLC25A52Q3SY17 297 aa17.3■□□□□ 0.36
CROCCP3-203ENST00000589964 TTC31Q49AM3 519 aaPredicted RBP17.3■□□□□ 0.36
CROCCP3-203ENST00000589964 FAM72AQ5TYM5 149 aa17.3■□□□□ 0.36
CROCCP3-203ENST00000589964 FAM72DQ6L9T8 149 aa17.3■□□□□ 0.36
CROCCP3-203ENST00000589964 USP30Q70CQ3 517 aa17.3■□□□□ 0.36
CROCCP3-203ENST00000589964 FAM72BQ86X60 149 aa17.3■□□□□ 0.36
CROCCP3-203ENST00000589964 KDM1BQ8NB78 822 aa17.3■□□□□ 0.36
CROCCP3-203ENST00000589964 CHST14Q8NCH0 376 aa17.3■□□□□ 0.36
CROCCP3-203ENST00000589964 PGAP3Q96FM1 320 aaPredicted RBP17.3■□□□□ 0.36
CROCCP3-203ENST00000589964 PCED1AQ9H1Q7 454 aa17.3■□□□□ 0.36
CROCCP3-203ENST00000589964 SGK2Q9HBY8 427 aa17.3■□□□□ 0.36
CROCCP3-203ENST00000589964 NDFIP2Q9NV92 336 aa17.3■□□□□ 0.36
CROCCP3-203ENST00000589964 TOR4AQ9NXH8 423 aa17.3■□□□□ 0.36
CROCCP3-203ENST00000589964 LIMA1Q9UHB6 759 aaKnown RBP17.3■□□□□ 0.36
CROCCP3-203ENST00000589964 SLC12A6Q9UHW9 1150 aa17.3■□□□□ 0.36
CROCCP3-203ENST00000589964 VPS28Q9UK41 221 aa17.3■□□□□ 0.36
CROCCP3-203ENST00000589964 PCOLCE2Q9UKZ9 415 aa17.3■□□□□ 0.36
CROCCP3-203ENST00000589964 ANKRD6Q9Y2G4 727 aa17.3■□□□□ 0.36
CROCCP3-203ENST00000589964 CHD6Q8TD26 2715 aa17.29■□□□□ 0.36
CROCCP3-203ENST00000589964 ZFHX4Q86UP3 3567 aa17.29■□□□□ 0.36
CROCCP3-203ENST00000589964 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.29■□□□□ 0.36
CROCCP3-203ENST00000589964 DRGXA6NNA5 263 aa17.29■□□□□ 0.36
CROCCP3-203ENST00000589964 E9PAM4 449 aa17.29■□□□□ 0.36
CROCCP3-203ENST00000589964 CBX4O00257 560 aa17.29■□□□□ 0.36
CROCCP3-203ENST00000589964 MOCS3O95396 460 aa17.29■□□□□ 0.36
CROCCP3-203ENST00000589964 LSM8O95777 96 aaKnown RBP17.29■□□□□ 0.36
CROCCP3-203ENST00000589964 SRCP12931 536 aa17.29■□□□□ 0.36
CROCCP3-203ENST00000589964 MMP8P22894 467 aa17.29■□□□□ 0.36
CROCCP3-203ENST00000589964 CTSKP43235 329 aa17.29■□□□□ 0.36
CROCCP3-203ENST00000589964 TAS2R38P59533 333 aa17.29■□□□□ 0.36
CROCCP3-203ENST00000589964 CNTN1Q12860 1018 aa17.29■□□□□ 0.36
CROCCP3-203ENST00000589964 ZNF177Q13360 481 aaPredicted RBP17.29■□□□□ 0.36
CROCCP3-203ENST00000589964 E2F5Q15329 346 aa17.29■□□□□ 0.36
CROCCP3-203ENST00000589964 DLG2Q15700 870 aa17.29■□□□□ 0.36
CROCCP3-203ENST00000589964 CDO1Q16878 200 aa17.29■□□□□ 0.36
CROCCP3-203ENST00000589964 TTC39BQ5VTQ0 682 aaPredicted RBP17.29■□□□□ 0.36
CROCCP3-203ENST00000589964 UNQ6494/PRO21346Q6UXR6 183 aa17.29■□□□□ 0.36
CROCCP3-203ENST00000589964 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.29■□□□□ 0.36
CROCCP3-203ENST00000589964 SH2D3CQ8N5H7 860 aa17.29■□□□□ 0.36
CROCCP3-203ENST00000589964 AOPEPQ8N6M6 819 aa17.29■□□□□ 0.36
CROCCP3-203ENST00000589964 ZNF557Q8N988 423 aaPredicted RBP17.29■□□□□ 0.36
CROCCP3-203ENST00000589964 BAHD1Q8TBE0 780 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms