RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 SSX2IPQ9Y2D8 614 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 ARL2BPQ9Y2Y0 163 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 UNC80Q8N2C7 3258 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 WDR27A2RRH5 827 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 CCT8L1PA6NM43 557 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 SLC38A8A6NNN8 435 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 TRIM49D1C9J1S8 452 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 DFFAO00273 331 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 KLF11O14901 512 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 MAFKO60675 156 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 IGLV3-27P01718 113 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 AMHP03971 560 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 SOD2P04179 222 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 GSTA1P08263 222 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 DHRS4L1P0CG22 281 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 CSH1P0DML2 217 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 CSH2P0DML3 217 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 NFKB1P19838 968 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 MGAT1P26572 445 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 ALDH3A1P30838 453 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 CRHR1P34998 444 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 ATP5C1P36542 298 aaKnown RBP10.61□□□□□ -0.71
VPS25-203ENST00000589520 CCNFP41002 786 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 NEK3P51956 506 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 ARPP19P56211 112 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 SESN2P58004 480 aaPredicted RBP10.61□□□□□ -0.71
VPS25-203ENST00000589520 TLE2Q04725 743 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 NIPAL4Q0D2K0 466 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 EFEMP1Q12805 493 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 IFT88Q13099 833 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 MPP3Q13368 585 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 LAMB3Q13751 1172 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 CRYMQ14894 314 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 EFTUD2Q15029 972 aaKnown RBP eCLIP10.61□□□□□ -0.71
VPS25-203ENST00000589520 PSMD5Q16401 504 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 QPCTQ16769 361 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 INSCQ1MX18 579 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 PARP15Q460N3 678 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 C5orf22Q49AR2 442 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 MS4A13Q5J8X5 152 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 PCID2Q5JVF3 399 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 RTP2Q5QGT7 225 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 C10orf120Q5SQS8 335 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 SYCP2LQ5T4T6 812 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 TMCO4Q5TGY1 634 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 RNF43Q68DV7 783 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 KIAA1841Q6NSI8 718 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 LVRNQ6Q4G3 990 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 POTEHQ6S545 545 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 RNF19BQ6ZMZ0 732 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 SPATA21Q7Z572 469 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 PRPF39Q86UA1 669 aaKnown RBP10.61□□□□□ -0.71
VPS25-203ENST00000589520 CCDC33Q8N5R6 958 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 DNAAF3Q8N9W5 541 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 STKLD1Q8NE28 680 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 GDAP1Q8TB36 358 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 ZNF398Q8TD17 642 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 TCP10LQ8TDR4 215 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 LRRN4Q8WUT4 740 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 TOP1MTQ969P6 601 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 OXNAD1Q96HP4 312 aaPredicted RBP10.61□□□□□ -0.71
VPS25-203ENST00000589520 AGAP3Q96P47 875 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 PGLYRP2Q96PD5 576 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 PAIP2Q9BPZ3 127 aaKnown RBP10.61□□□□□ -0.71
VPS25-203ENST00000589520 ELAC2Q9BQ52 826 aaKnown RBP10.61□□□□□ -0.71
VPS25-203ENST00000589520 MRM3Q9HC36 420 aaKnown RBP10.61□□□□□ -0.71
VPS25-203ENST00000589520 GLOD4Q9HC38 313 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 PRDM5Q9NQX1 630 aaPredicted RBP10.61□□□□□ -0.71
VPS25-203ENST00000589520 TMEM39AQ9NV64 488 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 OSER1Q9NX31 292 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 DCDC2Q9UHG0 476 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 DNMT3LQ9UJW3 386 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 TBX21Q9UL17 535 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 SOX13Q9UN79 622 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 COLQQ9Y215 455 aaPredicted RBP10.61□□□□□ -0.71
VPS25-203ENST00000589520 RPS6KL1Q9Y6S9 549 aa10.61□□□□□ -0.71
VPS25-203ENST00000589520 NLRC5Q86WI3 1866 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 SLC12A8A0AV02 714 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 MYO1CO00159 1063 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 BIRC5O15392 142 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 MSI1O43347 362 aaKnown RBP10.6□□□□□ -0.71
VPS25-203ENST00000589520 ABLIM3O94929 683 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 TGDSO95455 350 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 OAS1P00973 400 aaKnown RBP10.6□□□□□ -0.71
VPS25-203ENST00000589520 LAG3P18627 525 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 DNAJB1P25685 340 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 SPRP35270 261 aaPredicted RBP10.6□□□□□ -0.71
VPS25-203ENST00000589520 GP5P40197 560 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 GRIA1P42261 906 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 MAGEA9P43362 315 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 GPR15P49685 360 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 CSE1LP55060 971 aaKnown RBP10.6□□□□□ -0.71
VPS25-203ENST00000589520 CCL23P55773 120 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 USP46P62068 366 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 DSG1Q02413 1049 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 CREMQ03060 361 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 ZBTB17Q13105 803 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 DUSP4Q13115 394 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 BTG3Q14201 252 aaPredicted RBP10.6□□□□□ -0.71
VPS25-203ENST00000589520 RNF187Q5TA31 235 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms