RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 PCDHB18PQ96TA0 734 aa11.9□□□□□ -0.5
RFX1-204ENST00000588885 C11orf70Q9BRQ4 267 aa11.9□□□□□ -0.5
RFX1-204ENST00000588885 RAB6CQ9H0N0 254 aa11.9□□□□□ -0.5
RFX1-204ENST00000588885 SEPT11Q9NVA2 429 aaKnown RBP11.9□□□□□ -0.5
RFX1-204ENST00000588885 EVLQ9UI08 416 aaPredicted RBP11.9□□□□□ -0.5
RFX1-204ENST00000588885 ANGPTL2Q9UKU9 493 aa11.9□□□□□ -0.5
RFX1-204ENST00000588885 STAP1Q9ULZ2 295 aa11.9□□□□□ -0.5
RFX1-204ENST00000588885 PYCARDQ9ULZ3 195 aa11.9□□□□□ -0.5
RFX1-204ENST00000588885 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.89□□□□□ -0.51
RFX1-204ENST00000588885 FAM47DPA6NHR8 397 aa11.89□□□□□ -0.51
RFX1-204ENST00000588885 SOWAHDA6NJG2 315 aa11.89□□□□□ -0.51
RFX1-204ENST00000588885 GIPC1O14908 333 aa11.89□□□□□ -0.51
RFX1-204ENST00000588885 SRGAP2O75044 1071 aa11.89□□□□□ -0.51
RFX1-204ENST00000588885 DNTTP04053 509 aa11.89□□□□□ -0.51
RFX1-204ENST00000588885 ASLP04424 464 aa11.89□□□□□ -0.51
RFX1-204ENST00000588885 SERPINF2P08697 491 aa11.89□□□□□ -0.51
RFX1-204ENST00000588885 VAV1P15498 845 aa11.89□□□□□ -0.51
RFX1-204ENST00000588885 ACSL1P33121 698 aa11.89□□□□□ -0.51
RFX1-204ENST00000588885 ATP11AP98196 1134 aa11.89□□□□□ -0.51
RFX1-204ENST00000588885 ZNF177Q13360 481 aaPredicted RBP11.89□□□□□ -0.51
RFX1-204ENST00000588885 HNRNPA1L2Q32P51 320 aaKnown RBP11.89□□□□□ -0.51
RFX1-204ENST00000588885 SLC25A52Q3SY17 297 aa11.89□□□□□ -0.51
RFX1-204ENST00000588885 C9orf64Q5T6V5 341 aa11.89□□□□□ -0.51
RFX1-204ENST00000588885 N4BP2L1Q5TBK1 243 aaPredicted RBP11.89□□□□□ -0.51
RFX1-204ENST00000588885 DCAF12L1Q5VU92 463 aa11.89□□□□□ -0.51
RFX1-204ENST00000588885 SFMBT2Q5VUG0 894 aa11.89□□□□□ -0.51
RFX1-204ENST00000588885 CXorf57Q6NSI4 855 aaKnown RBP11.89□□□□□ -0.51
RFX1-204ENST00000588885 SLC23A3Q6PIS1 610 aa11.89□□□□□ -0.51
RFX1-204ENST00000588885 ZNF677Q86XU0 584 aa11.89□□□□□ -0.51
RFX1-204ENST00000588885 MMAAQ8IVH4 418 aaKnown RBP11.89□□□□□ -0.51
RFX1-204ENST00000588885 STK40Q8N2I9 435 aa11.89□□□□□ -0.51
RFX1-204ENST00000588885 ZCCHC9Q8N567 271 aaKnown RBP11.89□□□□□ -0.51
RFX1-204ENST00000588885 CCDC112Q8NEF3 446 aa11.89□□□□□ -0.51
RFX1-204ENST00000588885 OR8K1Q8NGG5 319 aa11.89□□□□□ -0.51
RFX1-204ENST00000588885 OR52K2Q8NGK3 314 aa11.89□□□□□ -0.51
RFX1-204ENST00000588885 FOXJ1Q92949 421 aa11.89□□□□□ -0.51
RFX1-204ENST00000588885 BAG1Q99933 345 aaPredicted RBP11.89□□□□□ -0.51
RFX1-204ENST00000588885 C6orf106Q9H6K1 298 aaPredicted RBP11.89□□□□□ -0.51
RFX1-204ENST00000588885 METTL5Q9NRN9 209 aaKnown RBP11.89□□□□□ -0.51
RFX1-204ENST00000588885 ARHGEF38Q9NXL2 777 aa11.89□□□□□ -0.51
RFX1-204ENST00000588885 RRN3Q9NYV6 651 aa11.89□□□□□ -0.51
RFX1-204ENST00000588885 TMEM59LQ9UK28 342 aa11.89□□□□□ -0.51
RFX1-204ENST00000588885 MYO6Q9UM54 1294 aa11.89□□□□□ -0.51
RFX1-204ENST00000588885 A0A1B0GVM2 712 aa11.88□□□□□ -0.51
RFX1-204ENST00000588885 TCAF2A6NFQ2 919 aa11.88□□□□□ -0.51
RFX1-204ENST00000588885 METTL12A8MUP2 240 aa11.88□□□□□ -0.51
RFX1-204ENST00000588885 FSBPO95073 299 aa11.88□□□□□ -0.51
RFX1-204ENST00000588885 KCNK5O95279 499 aa11.88□□□□□ -0.51
RFX1-204ENST00000588885 F9P00740 461 aa11.88□□□□□ -0.51
RFX1-204ENST00000588885 CYP1A1P04798 512 aaPredicted RBP11.88□□□□□ -0.51
RFX1-204ENST00000588885 SRPRAP08240 638 aaKnown RBP11.88□□□□□ -0.51
RFX1-204ENST00000588885 PLEKP08567 350 aaPredicted RBP11.88□□□□□ -0.51
RFX1-204ENST00000588885 SKILP12757 684 aa11.88□□□□□ -0.51
RFX1-204ENST00000588885 GNSP15586 552 aa11.88□□□□□ -0.51
RFX1-204ENST00000588885 HNRNPH3P31942 346 aaKnown RBP11.88□□□□□ -0.51
RFX1-204ENST00000588885 DPP6P42658 865 aa11.88□□□□□ -0.51
RFX1-204ENST00000588885 CDO1Q16878 200 aa11.88□□□□□ -0.51
RFX1-204ENST00000588885 ACCSLQ4AC99 568 aa11.88□□□□□ -0.51
RFX1-204ENST00000588885 ALFQ53S48 1182 aa11.88□□□□□ -0.51
RFX1-204ENST00000588885 TDRD12Q587J7 1177 aaKnown RBP11.88□□□□□ -0.51
RFX1-204ENST00000588885 SH3PXD2AQ5TCZ1 1133 aa11.88□□□□□ -0.51
RFX1-204ENST00000588885 TTC39BQ5VTQ0 682 aaPredicted RBP11.88□□□□□ -0.51
RFX1-204ENST00000588885 PEAR1Q5VY43 1037 aaPredicted RBP11.88□□□□□ -0.51
RFX1-204ENST00000588885 HGSNATQ68CP4 663 aa11.88□□□□□ -0.51
RFX1-204ENST00000588885 ZNF776Q68DI1 518 aaPredicted RBP11.88□□□□□ -0.51
RFX1-204ENST00000588885 RAD9BQ6WBX8 426 aa11.88□□□□□ -0.51
RFX1-204ENST00000588885 TFAP2DQ7Z6R9 452 aa11.88□□□□□ -0.51
RFX1-204ENST00000588885 FAM131BQ86XD5 332 aa11.88□□□□□ -0.51
RFX1-204ENST00000588885 CADM4Q8NFZ8 388 aa11.88□□□□□ -0.51
RFX1-204ENST00000588885 JOSD2Q8TAC2 188 aa11.88□□□□□ -0.51
RFX1-204ENST00000588885 RXFP2Q8WXD0 754 aa11.88□□□□□ -0.51
RFX1-204ENST00000588885 NT5C3BQ969T7 300 aa11.88□□□□□ -0.51
RFX1-204ENST00000588885 CHP1Q99653 195 aa11.88□□□□□ -0.51
RFX1-204ENST00000588885 FEM1AQ9BSK4 669 aa11.88□□□□□ -0.51
RFX1-204ENST00000588885 MUC3BQ9H195 1237 aa11.88□□□□□ -0.51
RFX1-204ENST00000588885 RSPH9Q9H1X1 276 aaPredicted RBP11.88□□□□□ -0.51
RFX1-204ENST00000588885 CAPN10Q9HC96 672 aa11.88□□□□□ -0.51
RFX1-204ENST00000588885 MPP6Q9NZW5 540 aa11.88□□□□□ -0.51
RFX1-204ENST00000588885 EIF2B4Q9UI10 523 aaKnown RBP11.88□□□□□ -0.51
RFX1-204ENST00000588885 VPS28Q9UK41 221 aa11.88□□□□□ -0.51
RFX1-204ENST00000588885 EDDM13A0A1B0GTR0 161 aa11.87□□□□□ -0.51
RFX1-204ENST00000588885 A0A1W2PP55 124 aa11.87□□□□□ -0.51
RFX1-204ENST00000588885 ARHGAP33O14559 1287 aa11.87□□□□□ -0.51
RFX1-204ENST00000588885 MID1O15344 667 aa11.87□□□□□ -0.51
RFX1-204ENST00000588885 BNIP3LO60238 219 aa11.87□□□□□ -0.51
RFX1-204ENST00000588885 RNASEH1O60930 286 aaKnown RBP11.87□□□□□ -0.51
RFX1-204ENST00000588885 CLDN11O75508 207 aa11.87□□□□□ -0.51
RFX1-204ENST00000588885 SEMA4FO95754 770 aa11.87□□□□□ -0.51
RFX1-204ENST00000588885 IGLV3-19P01714 112 aa11.87□□□□□ -0.51
RFX1-204ENST00000588885 FERP16591 822 aa11.87□□□□□ -0.51
RFX1-204ENST00000588885 MMP8P22894 467 aa11.87□□□□□ -0.51
RFX1-204ENST00000588885 HOXD12P35452 270 aa11.87□□□□□ -0.51
RFX1-204ENST00000588885 SCNN1AP37088 669 aa11.87□□□□□ -0.51
RFX1-204ENST00000588885 NSFP46459 744 aaKnown RBP11.87□□□□□ -0.51
RFX1-204ENST00000588885 PSMD8P48556 350 aa11.87□□□□□ -0.51
RFX1-204ENST00000588885 CLEC16AQ2KHT3 1053 aa11.87□□□□□ -0.51
RFX1-204ENST00000588885 C15orf59Q2T9L4 293 aaPredicted RBP11.87□□□□□ -0.51
RFX1-204ENST00000588885 CCDC14Q49A88 953 aa11.87□□□□□ -0.51
RFX1-204ENST00000588885 HS1BP3Q53T59 392 aa11.87□□□□□ -0.51
RFX1-204ENST00000588885 BRMS1LQ5PSV4 323 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms